BLASTX 7.6.2
Query= UN20208 /QuerySize=1006
(1005 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G40100.1 | Symbols: LHCB4.3 | LHCB4.3 (light h... 521 4e-148
TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding... 377 9e-105
TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light h... 371 4e-103
TAIR9_protein||AT3G08940.1 | Symbols: LHCB4.2 | LHCB4.2 (light h... 220 1e-057
TAIR9_protein||AT3G54890.1 | Symbols: LHCA1 | LHCA1; chlorophyll... 129 3e-030
TAIR9_protein||AT3G54890.4 | Symbols: LHCA1 | LHCA1; chlorophyll... 107 1e-023
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 94 9e-020
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 94 9e-020
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 93 3e-019
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 83 2e-016
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 75 6e-014
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 75 6e-014
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 75 6e-014
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 74 1e-013
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 74 1e-013
TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LI... 72 6e-013
TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding... 65 5e-011
TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll... 62 7e-010
TAIR9_protein||AT1G19150.1 | Symbols: LHCA6, LHCA2*1 | LHCA6; ch... 60 1e-009
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 54 1e-007
>TAIR9_protein||AT2G40100.1 | Symbols: LHCB4.3 | LHCB4.3 (light harvesting
complex PSII); chlorophyll binding | chr2:16745884-16747190 FORWARD
Length = 277
Score = 521 bits (1340), Expect = 4e-148
Identities = 249/277 (89%), Positives = 265/277 (95%)
Frame = -1
Query: 978 MATTTAAAASGIFGIRIQDPSSGAGRVQAKFNFSFGKKKAAPPPKKTKQVQNEGDRLVWF 799
MATTTAAAASGIFGIRIQDP G GRVQA+F FSFGKKK APPPKK++QVQ++GDRLVWF
Sbjct: 1 MATTTAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWF 60
Query: 798 PGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGEILGVRQESKEI 619
PGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAG+I+G+ QES EI
Sbjct: 61 PGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEI 120
Query: 618 NPTPFQPYTEVFGIERFRECELIHGRWAMLGVLGALAVEGLTGIAWQDAGKVELVEGSSY 439
PTPFQPYTEVFGI+RFRECELIHGRWAMLG LGA+AVE LTGIAWQDAGKVELVEGSSY
Sbjct: 121 KPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSY 180
Query: 438 LGQPLPFSLTTLIWIEVLVVGYIEFQRNAELDPEKRIYPGGYFDPLGLAADPAKLDTLKL 259
LGQPLPFSLTTLIWIEVLVVGYIEFQRN+ELDPEKRIYPGGYFDPLGLAADP KLDTLKL
Sbjct: 181 LGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKLDTLKL 240
Query: 258 AEIKHSRLAMIAFLIFSLQAAFTGKGPISFLATFSS* 148
AEIKHSRLAM+AFLIF+LQAAFTGKGP+SFLATF++*
Sbjct: 241 AEIKHSRLAMVAFLIFALQAAFTGKGPVSFLATFNN* 277
>TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding protein CP29
(LHCB4) | chr5:209084-210243 FORWARD
Length = 291
Score = 377 bits (966), Expect = 9e-105
Identities = 192/280 (68%), Positives = 224/280 (80%), Gaps = 8/280 (2%)
Frame = -1
Query: 978 MATTT--AAAASGIFGIRIQDP-SSGAGRVQAKFNFSFGKKKAAPPPKKTKQVQNEGDRL 808
MA T+ AAAAS I G R+ G+GR A F FGKKKAAP K V DR
Sbjct: 1 MAATSAAAAAASSIMGTRVAPGIHPGSGRFTAV--FGFGKKKAAPKKSAKKTVTT--DRP 56
Query: 807 VWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGEILGVRQES 628
+W+PGA P+WLDGS++GD GFDPFGLGKPAEYLQ+D D LDQNLAKN+AG+++G R E+
Sbjct: 57 LWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEA 116
Query: 627 KEINPTPFQPYTEVFGIERFRECELIHGRWAMLGVLGALAVEGLTGIAWQDAGKVELVEG 448
+ TPFQPY+EVFGI+RFRECELIHGRWAML LGAL+VE LTG+ WQDAGKVELV+G
Sbjct: 117 ADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDG 176
Query: 447 SSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNAELDPEKRIYPGG-YFDPLGLAADPAKLD 271
SSYLGQPLPFS++TLIWIEVLV+GYIEFQRNAELD EKR+YPGG +FDPLGLAADP K
Sbjct: 177 SSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTA 236
Query: 270 TLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLATFSS 151
L+LAEIKH+RLAM+AFL F++QAA TGKGP++ AT S
Sbjct: 237 QLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLS 276
>TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light harvesting
complex PSII); chlorophyll binding | chr3:2717717-2718665 FORWARD
Length = 288
Score = 371 bits (952), Expect = 4e-103
Identities = 188/275 (68%), Positives = 223/275 (81%), Gaps = 8/275 (2%)
Frame = -1
Query: 969 TTAAAASGIFGIR-IQDPSSGAGRVQAKFNFSFGKKKAAPPPKKTKQVQNEGDRLVWFPG 793
+TAAAAS I G R + D SS + R A+ F FG KKA+ PKK K V + DR +WFPG
Sbjct: 5 STAAAASSIMGTRVVSDISSNSSRFTAR--FGFGTKKAS--PKKAKTVIS--DRPLWFPG 58
Query: 792 ANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGEILGVRQESKEINP 613
A PE+LDGS++GD GFDPFGLGKPAEYLQ+D D LDQNLAKN+ GE++G R E+ +
Sbjct: 59 AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKS 118
Query: 612 TPFQPYTEVFGIERFRECELIHGRWAMLGVLGALAVEGLTGIAWQDAGKVELVEGSSYLG 433
TPFQPY+EVFG++RFRECELIHGRWAML LGA+ VE LTG+ WQDAGKVELV+GSSYLG
Sbjct: 119 TPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLG 178
Query: 432 QPLPFSLTTLIWIEVLVVGYIEFQRNAELDPEKRIYPGG-YFDPLGLAADPAKLDTLKLA 256
QPLPFS++TLIWIEVLV+GYIEFQRNAELD EKR+YPGG +FDPLGLA+DP K L+LA
Sbjct: 179 QPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLA 238
Query: 255 EIKHSRLAMIAFLIFSLQAAFTGKGPISFLATFSS 151
EIKH+RLAM+ FL F++QAA TGKGP++ AT S
Sbjct: 239 EIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLS 273
>TAIR9_protein||AT3G08940.1 | Symbols: LHCB4.2 | LHCB4.2 (light harvesting
complex PSII); chlorophyll binding | chr3:2717717-2718400 FORWARD
Length = 228
Score = 220 bits (560), Expect = 1e-057
Identities = 115/184 (62%), Positives = 136/184 (73%), Gaps = 7/184 (3%)
Frame = -1
Query: 966 TAAAASGIFGIR-IQDPSSGAGRVQAKFNFSFGKKKAAPPPKKTKQVQNEGDRLVWFPGA 790
TAAAAS I G R + D SS + R A+ F FG KKA+ PKK K V + DR +WFPGA
Sbjct: 6 TAAAASSIMGTRVVSDISSNSSRFTAR--FGFGTKKAS--PKKAKTVIS--DRPLWFPGA 59
Query: 789 NPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGEILGVRQESKEINPT 610
PE+LDGS++GD GFDPFGLGKPAEYLQ+D D LDQNLAKN+ GE++G R E+ + T
Sbjct: 60 KSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKST 119
Query: 609 PFQPYTEVFGIERFRECELIHGRWAMLGVLGALAVEGLTGIAWQDAGKVELVEGSSYLGQ 430
PFQPY+EVFG++RFRECELIHGRWAML LGA+ VE LTG+ WQDAGKV + SS L
Sbjct: 120 PFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVSPLFFSSLLRL 179
Query: 429 PLPF 418
L F
Sbjct: 180 CLAF 183
>TAIR9_protein||AT3G54890.1 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339706-20340922 REVERSE
Length = 242
Score = 129 bits (324), Expect = 3e-030
Identities = 70/144 (48%), Positives = 98/144 (68%), Gaps = 4/144 (2%)
Frame = -1
Query: 579 IERFRECELIHGRWAMLGVLGALAVEGLTGIAWQDAGKVELVEG--SSYLGQPLPF-SLT 409
+ER++E ELIH RWAML V G L E L W A + + G ++YLG P+P+ +L
Sbjct: 80 LERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLP 139
Query: 408 TLIWIEVLVVGYIEFQRNAELDPEKRIYPGGYFDPLGLAADPAKLDTLKLAEIKHSRLAM 229
T++ IE L + ++E QR+ E DPEK+ YPGG FDPLG + DP KL+ LK+ EIK+ RLA+
Sbjct: 140 TILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLAL 199
Query: 228 IAFLIFSL-QAAFTGKGPISFLAT 160
+AF+ F + Q+A+ G GP+ LAT
Sbjct: 200 LAFVGFCVQQSAYPGTGPLENLAT 223
>TAIR9_protein||AT3G54890.4 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339881-20340922 REVERSE
Length = 214
Score = 107 bits (266), Expect = 1e-023
Identities = 56/117 (47%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
Frame = -1
Query: 579 IERFRECELIHGRWAMLGVLGALAVEGLTGIAWQDAGKVELVEG--SSYLGQPLPF-SLT 409
+ER++E ELIH RWAML V G L E L W A + + G ++YLG P+P+ +L
Sbjct: 80 LERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLP 139
Query: 408 TLIWIEVLVVGYIEFQRNAELDPEKRIYPGGYFDPLGLAADPAKLDTLKLAEIKHSR 238
T++ IE L + ++E QR+ E DPEK+ YPGG FDPLG + DP KL+ LK+ EIK+ +
Sbjct: 140 TILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGK 196
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 94 bits (233), Expect = 9e-020
Identities = 65/151 (43%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
Frame = -1
Query: 567 RECELIHGRWAMLGVLGALAVEGLT--GI-----AWQDAGKVELVEGS-SYLGQPLPFSL 412
RE E+IH RWAMLG LG E L+ G+ W AG EG YLG P
Sbjct: 95 RELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 154
Query: 411 TTL--IW-IEVLVVGYIEFQR------NAELDPEKRIYPGGYFDPLGLAADPAKLDTLKL 259
++ IW ++V+++G+IE R LDP +YPGG FDPL LA DP LK+
Sbjct: 155 QSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDP---LYPGGAFDPLNLAEDPEAFSELKV 211
Query: 258 AEIKHSRLAMIAFLIFSLQAAFTGKGPISFL 166
E+K+ RLAM + F +QA TGKGPI L
Sbjct: 212 KELKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 94 bits (233), Expect = 9e-020
Identities = 65/151 (43%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
Frame = -1
Query: 567 RECELIHGRWAMLGVLGALAVEGLT--GI-----AWQDAGKVELVEGS-SYLGQPLPFSL 412
RE E+IH RWAMLG LG E L+ G+ W AG EG YLG P
Sbjct: 95 RELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 154
Query: 411 TTL--IW-IEVLVVGYIEFQR------NAELDPEKRIYPGGYFDPLGLAADPAKLDTLKL 259
++ IW ++V+++G+IE R LDP +YPGG FDPL LA DP LK+
Sbjct: 155 QSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDP---LYPGGAFDPLNLAEDPEAFSELKV 211
Query: 258 AEIKHSRLAMIAFLIFSLQAAFTGKGPISFL 166
E+K+ RLAM + F +QA TGKGPI L
Sbjct: 212 KELKNGRLAMFSMFGFFVQAIVTGKGPIENL 242
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 93 bits (229), Expect = 3e-019
Identities = 65/151 (43%), Positives = 81/151 (53%), Gaps = 20/151 (13%)
Frame = -1
Query: 567 RECELIHGRWAMLGVLGALAVEGLT--GI-----AWQDAGKVELVEGS-SYLGQPLPFSL 412
RE E+IH RWAMLG LG E L+ G+ W AG EG YLG P
Sbjct: 96 RELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 155
Query: 411 TTL--IW-IEVLVVGYIEFQR------NAELDPEKRIYPGGYFDPLGLAADPAKLDTLKL 259
++ IW +V+++G+IE R LDP +YPGG FDPL LA DP LK+
Sbjct: 156 QSILAIWACQVVLMGFIEGYRIGGGPLGEGLDP---LYPGGAFDPLNLAEDPEAFSELKV 212
Query: 258 AEIKHSRLAMIAFLIFSLQAAFTGKGPISFL 166
E+K+ RLAM + F +QA TGKGPI L
Sbjct: 213 KELKNGRLAMFSMFGFFVQAIVTGKGPIENL 243
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 83 bits (204), Expect = 2e-016
Identities = 51/119 (42%), Positives = 74/119 (62%), Gaps = 6/119 (5%)
Frame = -1
Query: 483 WQDAGKVELVEGS--SYLGQPLPFSLTTLIWIEVLVVGYIEFQRNAE-LDPEKRIYPGGY 313
W G + L++G+ +Y G+ +P +L + EV+++G E+ R LD E +++PGG
Sbjct: 147 WFKTGAL-LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGP 205
Query: 312 FDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLATFSS*NEPF 136
FDPLGLA DP + LK+ EIK+ RLAM A L F +QA TG+GP+ LA S +PF
Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLS--DPF 262
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 75 bits (183), Expect = 6e-014
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = -1
Query: 483 WQDAGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQRNAELDP----EKRI 328
W AG +G YLG P ++ IW +V+++G +E R A P E +
Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLL 190
Query: 327 YPGGYFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLA 163
YPGG FDPLGLA DP LK+ E+K+ RLAM + F +QA TGKGPI LA
Sbjct: 191 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 75 bits (183), Expect = 6e-014
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = -1
Query: 483 WQDAGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQRNAELDP----EKRI 328
W AG +G YLG P ++ IW +V+++G +E R A P E +
Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLL 190
Query: 327 YPGGYFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLA 163
YPGG FDPLGLA DP LK+ E+K+ RLAM + F +QA TGKGPI LA
Sbjct: 191 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 75 bits (183), Expect = 6e-014
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = -1
Query: 483 WQDAGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQRNAELDP----EKRI 328
W AG +G YLG P ++ IW +V+++G +E R A P E +
Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLL 190
Query: 327 YPGGYFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLA 163
YPGG FDPLGLA DP LK+ E+K+ RLAM + F +QA TGKGPI LA
Sbjct: 191 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 74 bits (180), Expect = 1e-013
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = -1
Query: 483 WQDAGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQRNAELDP----EKRI 328
W AG +G YLG P ++ IW +V+++G +E R A P E +
Sbjct: 130 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLL 189
Query: 327 YPGGYFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLA 163
YPGG FDPLGLA DP LK+ E+K+ RLAM + F +QA TGKGP+ LA
Sbjct: 190 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 244
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 74 bits (180), Expect = 1e-013
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = -1
Query: 483 WQDAGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQRNAELDP----EKRI 328
W AG +G YLG P ++ IW +V+++G +E R A P E +
Sbjct: 129 WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLL 188
Query: 327 YPGGYFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFLA 163
YPGG FDPLGLA DP LK+ E+K+ RLAM + F +QA TGKGP+ LA
Sbjct: 189 YPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243
>TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING
CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule |
chr5:22038424-22039383 FORWARD
Length = 266
Score = 72 bits (174), Expect = 6e-013
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Frame = -1
Query: 483 WQDAGKVELVEGS-SYLGQP---LPFSLTTLIWIEVLVVGYIEFQRNAELD---PEKRIY 325
W AG EG YLG P S+ ++ +V+++G +E R LD +Y
Sbjct: 129 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLY 188
Query: 324 PGG-YFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFL 166
PGG YFDPLGLA DP LK+ EIK+ RLAM + F +QA TGKGP+ L
Sbjct: 189 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242
>TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding family protein
| chr1:28729132-28730754 FORWARD
Length = 328
Score = 65 bits (158), Expect = 5e-011
Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -1
Query: 327 YPGG-YFDPLGLAADPAKLDTLKLAEIKHSRLAMIAFLIFSLQAAFTGKGPISFL 166
YPGG FDPL L+ DP + LK+ EIK+ RLAM+A+L F QAAFTGKGP+ L
Sbjct: 255 YPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNL 309
>TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll binding |
chr3:22745736-22747032 FORWARD
Length = 258
Score = 62 bits (148), Expect = 7e-010
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -1
Query: 852 PPKKTKQVQNEGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYD 697
P + V + DR +WFPG+ PPEWLDGS+ GD GFDP GL + L+++
Sbjct: 39 PDASVRAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWN 90
>TAIR9_protein||AT1G19150.1 | Symbols: LHCA6, LHCA2*1 | LHCA6; chlorophyll
binding | chr1:6612806-6613799 FORWARD
Length = 271
Score = 60 bits (145), Expect = 1e-009
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -1
Query: 816 DRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQY 700
DR +WFPG++PPEWLDGS+ GD GFDP GLG + L++
Sbjct: 64 DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKW 102
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 54 bits (128), Expect = 1e-007
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = -1
Query: 816 DRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQY 700
+R W PG NPP +LDG++ GD GFDP GLG+ E L++
Sbjct: 45 ERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKW 83
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,552,300,124
Number of Sequences: 33410
Number of Extensions: 10552300124
Number of Successful Extensions: 359139626
Number of sequences better than 0.0: 0
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