BLASTX 7.6.2
Query= UN20214 /QuerySize=1173
(1172 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containi... 403 4e-110
gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis ... 379 8e-103
gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana] 316 5e-084
gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidops... 282 1e-073
gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis ... 258 2e-066
gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis ... 257 3e-066
gi|15238138|ref|NP_196596.1| F-box protein [Arabidopsis thaliana] 243 5e-062
gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis ... 240 3e-061
gi|15234258|ref|NP_192073.1| F-box associated ubiquitination eff... 234 2e-059
gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis ... 234 3e-059
gi|15220334|ref|NP_172594.1| F-box and associated interaction do... 233 4e-059
gi|3859605|gb|AAC72871.1| T15B16.15 gene product [Arabidopsis th... 229 1e-057
gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidops... 217 4e-054
gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis ... 216 9e-054
gi|15221369|ref|NP_172711.1| F-box associated ubiquitination eff... 186 1e-044
gi|8778634|gb|AAF79642.1|AC025416_16 F5O11.24 [Arabidopsis thali... 186 1e-044
gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana] 159 1e-036
gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis tha... 159 1e-036
gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis ... 145 2e-032
gi|42571441|ref|NP_973811.1| F-box and associated interaction do... 140 5e-031
>gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containing protein
[Arabidopsis thaliana]
Length = 382
Score = 403 bits (1034), Expect = 4e-110
Identities = 209/356 (58%), Positives = 256/356 (71%), Gaps = 16/356 (4%)
Frame = +1
Query: 4 FKSVSKQWKSTIESRYFQERQ-SKQSGGGDPDVLMVSSSCD-----ESLRTLVLGPSSSV 165
FK+VSKQWKSTIES +FQ RQ +++ G+PDVLMVS D E+L TLVLG SSSV
Sbjct: 33 FKAVSKQWKSTIESPFFQRRQFTQRQQSGNPDVLMVSRCADINSEIEALTTLVLGSSSSV 92
Query: 166 KIPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLII 345
KIPTPW+ + + + Y VS +SCDGLVCL+ +SG+V NPATRWY PLPL +LQQL+I
Sbjct: 93 KIPTPWEEE-EEEDKEYSVSQDSCDGLVCLFDKFKSGFVFNPATRWYHPLPLCQLQQLLI 151
Query: 346 SQGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVT 525
+ G + + + + +LGFGKD + GTYK VWLYNS EI L+NATTCEVFDF +NAWRYV+
Sbjct: 152 AIGDGFYDLGYRVSRLGFGKDKLTGTYKPVWLYNSIEIGLENATTCEVFDFSTNAWRYVS 211
Query: 526 PSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPY 705
P+APYR+VG PV VDGSLHW T+CEETK++SFDLHTE FQV+S P + D
Sbjct: 212 PAAPYRIVGCPAPVCVDGSLHWFTECEETKILSFDLHTETFQVVSKAPFANVDGFD---- 267
Query: 706 AMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTSILYDCPTVCAFRPLL 885
+V+CNLDNRLCVS MK P+QVIWS NSGNKTW K+ SI+L +TS + VCA PL
Sbjct: 268 -IVMCNLDNRLCVSEMKLPNQVIWSFNSGNKTWHKMCSINLDITSRWFGPTQVCAVLPLA 326
Query: 886 FLDAKTKDKKKKKNLLFYDSVKSGYLLIHDPETLLDDFTFRADVSMGFLVCYFQTL 1053
LD K KKKKK LLFY V+ +++HD ET D F AD S+G VCYF +L
Sbjct: 327 LLDGK---KKKKKKLLFYCRVRKRTMVVHDDETKSYDVAFEAD-SIGHPVCYFPSL 378
>gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 379 bits (971), Expect = 8e-103
Identities = 202/321 (62%), Positives = 234/321 (72%), Gaps = 23/321 (7%)
Frame = +1
Query: 4 FKSVSKQWKSTIESRYFQERQSKQSGG-GDPDVLMVSSSCD-------ESLRTLVLGPSS 159
FK+VSKQW STI+ + FQER +Q GDPDVLMVS + ESL TLVLG SS
Sbjct: 34 FKAVSKQWNSTIQCQLFQERHLRQRQQLGDPDVLMVSLRREDVINPDIESLTTLVLGSSS 93
Query: 160 S-VKIPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQ 336
S VKI TPW+ + YLVS +SCDGLVCLY+P SG+VVNP TRWYRPLP+ LQQ
Sbjct: 94 SPVKIHTPWEKE----NTDYLVSHSSCDGLVCLYNPHHSGFVVNPTTRWYRPLPVCELQQ 149
Query: 337 LIISQGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWR 516
LII S+ +GL+KLGFGKD GTYK VWLYNS EI L+NATTCEVFDF +NAWR
Sbjct: 150 LIIDLRDSFYLLGYGLYKLGFGKDKFTGTYKPVWLYNSLEIGLENATTCEVFDFTTNAWR 209
Query: 517 YVTPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDD 696
YVTP+APYRVV DPV+VDGSLHW TDC+ETK+VSFDLHTEAFQVI SK PF N +
Sbjct: 210 YVTPAAPYRVVHFPDPVYVDGSLHWFTDCQETKVVSFDLHTEAFQVI-SKAPFAKN---E 265
Query: 697 NPYAMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTSILYDCPTVCAFR 876
NP+ +V+CNLDNRLCVS K P+QVIWS +S NKTWEK+YSID+ ++ + +CA
Sbjct: 266 NPFDIVMCNLDNRLCVSQQKWPNQVIWSFHSNNKTWEKMYSIDVTVSLV---GKHICALP 322
Query: 877 PLLFLDAKTKDKKKKKNLLFY 939
PL L K KKKKK LLFY
Sbjct: 323 PLALLGGK---KKKKKKLLFY 340
>gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana]
Length = 796
Score = 316 bits (809), Expect = 5e-084
Identities = 170/293 (58%), Positives = 200/293 (68%), Gaps = 22/293 (7%)
Frame = +1
Query: 67 SKQSGGGDPDVLMVS-------SSCDESLRTLVLGPSSSVKIPTPWDNKVKATGRRYLVS 225
SKQS GDPDVLMVS + ESLRTL LG SS+ KIPTPW+ YLVS
Sbjct: 510 SKQS--GDPDVLMVSVFPHHVINPTIESLRTLQLGSSSTFKIPTPWEK----DNVLYLVS 563
Query: 226 DNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIISQGQSYVNTKHGLFKLGFGK 405
+SCDGLVCLY+ +SGYVVNP TRWYRPLPL Q+L+I Y K F LGFGK
Sbjct: 564 HSSCDGLVCLYNHDKSGYVVNPTTRWYRPLPLCDYQKLMIDLRDGYYKLKRKFFMLGFGK 623
Query: 406 DIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTPSAPYRVVGVADPVFVDGSL 585
D GTYK VWLYNS+EI L NATTCEVFDF +NAWRYVT +APYR+ PV++DGSL
Sbjct: 624 DKFRGTYKPVWLYNSAEIGLKNATTCEVFDFSTNAWRYVTLAAPYRIAAYPAPVYLDGSL 683
Query: 586 HWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPYAMVLCNLDNRLCVSHMKSPD 765
+W T+C+ETK++ F+LHTE FQV+ K PF + +PY +V NLDNRLCVS MK P+
Sbjct: 684 YWFTECKETKVLPFNLHTETFQVV-CKAPFA----NVDPYKIVFYNLDNRLCVSEMKWPN 738
Query: 766 QVIWSLNSGNKTWEKIYSIDLVMTSILYDCPTVCAFRPLLFLDAKTKDKKKKK 924
QVIWS NSGNKTW+K+ SI L + + +CA PL D K K KKKKK
Sbjct: 739 QVIWSFNSGNKTWDKLCSIVLNLNFV----TGICAVLPLALFDGKKKKKKKKK 787
>gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 374
Score = 282 bits (720), Expect = 1e-073
Identities = 142/225 (63%), Positives = 170/225 (75%), Gaps = 10/225 (4%)
Frame = +1
Query: 19 KQWKSTIESRYFQERQSKQ-SGGGDPDVLMVS-------SSCDESLRTLVLGPSSSVKIP 174
KQWKSTIES +FQ RQ +Q G+PDVL+VS + E+L TLVLG SSSVKIP
Sbjct: 38 KQWKSTIESPFFQRRQFQQRQQSGNPDVLLVSLCRYDVINLDIEALATLVLGSSSSVKIP 97
Query: 175 TPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIISQG 354
TPW+ K + T YLVS +SCDGLVCL++ +SG+VVNP TRWY PLP +LQQ+I G
Sbjct: 98 TPWEEKEEDT--EYLVSRDSCDGLVCLFNIRKSGFVVNPTTRWYHPLPPCQLQQVITGLG 155
Query: 355 QSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTPSA 534
S+ + + L KLGFGKD + GTYK VWLYNS EI L+NATTCEVFDF +NAWRYV+P+A
Sbjct: 156 DSFYDLGYRLSKLGFGKDKLTGTYKPVWLYNSLEIGLENATTCEVFDFSTNAWRYVSPAA 215
Query: 535 PYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKP 669
PYR+VG PV VDGSLHW T+CEETK++SFDLHTE FQV+S P
Sbjct: 216 PYRIVGCPSPVCVDGSLHWFTECEETKILSFDLHTETFQVVSKAP 260
>gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 258 bits (657), Expect = 2e-066
Identities = 160/338 (47%), Positives = 204/338 (60%), Gaps = 30/338 (8%)
Frame = +1
Query: 7 KSVSKQWKSTIESRYFQERQ---SKQSGGGDPDVLMVSSSCDESL-RTLVLGPS--SSVK 168
KSVSK+WKSTIES F+ERQ KQS G DVL VS DE+ +VLG S S+V+
Sbjct: 53 KSVSKRWKSTIESHRFKERQFICRKQSRG--IDVLFVSLGDDEARGMRIVLGSSIVSTVR 110
Query: 169 IPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIIS 348
PT + SCDGL+CLY + +VVNPATRW++ PLS ++LI
Sbjct: 111 FPTSCT----------VFCHGSCDGLLCLYSLNDPSFVVNPATRWHQSFPLSSYRELIFD 160
Query: 349 QGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTP 528
+ + KLGFG+D + GTYK VWLYNSSE L+N TTCEVFDF +NAWR++
Sbjct: 161 RLKIKGALDITCAKLGFGRDKVRGTYKPVWLYNSSEYGLENITTCEVFDFSTNAWRFLHQ 220
Query: 529 SAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPYA 708
++ YR++G PV++DGSL+W T+CEETK++SFDLHTE FQVI SK PFP H +P
Sbjct: 221 ASLYRILGDHYPVYLDGSLYWFTECEETKVLSFDLHTETFQVI-SKTPFP---HVLDPLG 276
Query: 709 MVLCNLDNRLCVSHMKSPDQVIWSLNS--GNKTWEKIYSIDLVMTSILYDCPTVCAFRPL 882
+C LDNRLCVS P QVIWS +S G + W+K+ SIDL T LY V P+
Sbjct: 277 FTMCILDNRLCVSETNWPTQVIWSFDSSGGMEPWKKLCSIDLTETISLYG-KAVSRLFPI 335
Query: 883 LFLDAKTK----DKKKKKNLLFYDSVKSGYLLIHDPET 984
LD KTK + + + YD Y ++ P T
Sbjct: 336 AILD-KTKLLLHSRSYLQPAVIYDLQTKSYGVLFTPTT 372
>gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 257 bits (656), Expect = 3e-066
Identities = 152/297 (51%), Positives = 190/297 (63%), Gaps = 46/297 (15%)
Frame = +1
Query: 13 VSKQWKSTIESRYFQERQ-SKQSGGGDPDVLMVSSSCDES---------LRTLVLGPSSS 162
VSKQWKSTI+ R FQERQ + G+PDVL+V S CDES +RTLV+G S S
Sbjct: 27 VSKQWKSTIQCRAFQERQLMHRRQSGNPDVLLV-SVCDESYLIGTELEAMRTLVVGSSVS 85
Query: 163 VKIPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLI 342
V+I TPW+ + Y V +SCDGL+CLY+ VVNP TRW+R P S Q+L
Sbjct: 86 VRILTPWEKTL------YKVCQSSCDGLICLYNDYPKNIVVNPTTRWHRTFPRSTYQRL- 138
Query: 343 ISQGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEI-----DLDN---ATTCEVFDF 498
S G+S+ KLGFGKD I GTYK VWLYNS+E+ D DN +T CEVFDF
Sbjct: 139 TSHGESWA-------KLGFGKDKINGTYKPVWLYNSAELGGLNDDDDNNNTSTICEVFDF 191
Query: 499 VSNAWRYVTPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFP 678
S AWRYV P++PY ++ DPV+VDGSLHWLT E T ++SFDLHTE FQV+ SK PF
Sbjct: 192 TSKAWRYVVPASPYPILPYQDPVYVDGSLHWLTAGETTNVLSFDLHTETFQVM-SKAPF- 249
Query: 679 ANSHDDNPYAMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTSILY 849
+ HD + +V+ K P+QVIWSL+S +KTW++IYSIDL +TS +
Sbjct: 250 LHHHDHSNRELVI-----------KKWPNQVIWSLDSDHKTWKEIYSIDLNITSFWF 295
>gi|15238138|ref|NP_196596.1| F-box protein [Arabidopsis thaliana]
Length = 445
Score = 243 bits (619), Expect = 5e-062
Identities = 142/275 (51%), Positives = 182/275 (66%), Gaps = 21/275 (7%)
Frame = +1
Query: 109 SSSCDESLRT-LVLGPSSSVKIPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLE-SGYV 282
S S E+LRT LV ++SV+IPTPW++K+ Y V + SCDGL+CL+ E V
Sbjct: 140 SISSFEALRTFLVESSAASVQIPTPWEDKL------YFVCNTSCDGLICLFSFYELPSIV 193
Query: 283 VNPATRWYRPLPLSRLQQLIISQGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEID 462
VNP TRW+R P Q + +G+ + K GFGKD I GTYK VWLYNS+E+D
Sbjct: 194 VNPTTRWHRTFPKCNYQLVAADKGERHECFKVACPTPGFGKDKISGTYKPVWLYNSAELD 253
Query: 463 L-DNATTCEVFDFVSNAWRYVTPSAPYRVVGVADPVFVDGSLHWLTDCE---ETKLVSFD 630
L D TTCEVFDF +NAWRYV P++P+ ++ DPV+VDGSLHW T ET ++S D
Sbjct: 254 LNDKPTTCEVFDFATNAWRYVFPASPHLILHTQDPVYVDGSLHWFTALSHEGETMVLSLD 313
Query: 631 LHTEAFQVISSKPPFPANSHDDNPYAMVLCNLDNRLCVSHMKSPDQVIWSL-NSGNKTWE 807
LH+E FQVI SK PF N D+ Y +V+CNL +RLCVS K P+QVIWSL +S +KTW+
Sbjct: 314 LHSETFQVI-SKAPF-LNVSDE--YYIVMCNLGDRLCVSEQKWPNQVIWSLDDSDHKTWK 369
Query: 808 KIYSIDLVMTSILYDCPTVCAFRPLLFLDAKTKDK 912
+IYSIDL++TS L+ + AF PL LD KDK
Sbjct: 370 QIYSIDLIITSSLF-FSAIFAFTPLAVLD---KDK 400
>gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 240 bits (612), Expect = 3e-061
Identities = 148/294 (50%), Positives = 183/294 (62%), Gaps = 33/294 (11%)
Frame = +1
Query: 4 FKSVSKQWKSTIESRYFQERQ---SKQSGGGDPDVLMV--SSSCDE-SLRTLVLGPS--S 159
FKSVSK WKSTIESR F+ERQ KQS G PDVL+V + SCD ++ LG S S
Sbjct: 46 FKSVSKNWKSTIESRCFKERQLIRRKQSRG--PDVLLVPLTWSCDGIYAESIALGSSIVS 103
Query: 160 SVKIPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQL 339
+V++PT ++G R + SCDGL+CLY VVNPAT W++ PLS LQ L
Sbjct: 104 TVRLPT-------SSGSR--ICHGSCDGLLCLYCVYTPSVVVNPATGWHQTFPLSNLQLL 154
Query: 340 IISQGQSYVNTKHGLF---KLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNA 510
+ H F LGFG+D GTYK VWLYNSS+ L NATTCEVFDF +N
Sbjct: 155 CLDMYDK--PEDHDFFPMPNLGFGRDKFTGTYKPVWLYNSSDFGLPNATTCEVFDFSTNT 212
Query: 511 WRYVTPSAPYRVVGVADPVFVDGSLHWLTDC-EETKLVSFDLHTEAFQVISSKPPFPANS 687
WRYV PS P+R+ +PV++DGSLHWL + EETK++SFDLH+E F V+ K PF +
Sbjct: 213 WRYVHPSPPHRIDDFINPVYLDGSLHWLAEGEEETKVLSFDLHSETFHVL-CKAPF---A 268
Query: 688 HDDNPYAMVLCNLDNRLCVSHMKSPDQVIWSLNSG----NKTWEKIYSIDLVMT 837
D P++ + LDNRLCVS S QVIWS +S NKTW K+ SID+ T
Sbjct: 269 RDHFPFSHNMFILDNRLCVSEQDSSTQVIWSFHSSGGNKNKTWNKLCSIDVTRT 322
>gi|15234258|ref|NP_192073.1| F-box associated ubiquitination effector family
protein [Arabidopsis thaliana]
Length = 300
Score = 234 bits (596), Expect = 2e-059
Identities = 141/309 (45%), Positives = 184/309 (59%), Gaps = 40/309 (12%)
Frame = +1
Query: 178 PWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIISQGQ 357
P+D + R+ +D SCDGL+CLY+ VVNP TRW+R PLS Q+L + Q
Sbjct: 5 PYDTDIPCFPRK--TTDASCDGLICLYNTYAWNIVVNPTTRWHREFPLSTFQRLDRYEHQ 62
Query: 358 SYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEI--------DLDN-----------ATT 480
KLGFGKD I GTYK VWLYNS+E+ D D+ +T
Sbjct: 63 V---GSVSWAKLGFGKDKINGTYKPVWLYNSAELGGLNDDDEDYDDISIICQGNNNTSTF 119
Query: 481 CEVFDFVSNAWRYVTPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVIS 660
C+VFDF + AWR+V P++PYR++ DPV+VDGSLHWLT T ++SFDLHTE FQV+
Sbjct: 120 CQVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLT----TNVLSFDLHTETFQVV- 174
Query: 661 SKPPFPANSHDDNPYAMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTS 840
SK PF + HD + +++CNLD+RLCVS P+QVIWSL+S +KTW++IYSIDL +TS
Sbjct: 175 SKAPF-LHHHDYSSRELIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEIYSIDLNITS 233
Query: 841 ILYDCPTVCAFRPLLFLDAKTKDKKKKKNLLFYDSVKSGYLLIHDPETLLDDFTFR-ADV 1017
L+ A RPL D KDK LLF + LL HDP+T +F +R
Sbjct: 234 SLFG-SNGFALRPLAVFD---KDK-----LLFCEPEYGDQLLTHDPKTKSYEFDYRFFSP 284
Query: 1018 SMGFLVCYF 1044
+ +CYF
Sbjct: 285 TTALPLCYF 293
>gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 234 bits (595), Expect = 3e-059
Identities = 140/304 (46%), Positives = 177/304 (58%), Gaps = 22/304 (7%)
Frame = +1
Query: 4 FKSVSKQWKSTIESRYFQER--QSKQSGGGDPDVLMVSSSCDESLRTLVLGPSSSVKIPT 177
F+SVSK+WKSTI+SR F+ER Q ++ G + V C TL +
Sbjct: 34 FRSVSKKWKSTIDSRRFKERRLQRRRHSRG----VYVLFLCVNGENTLKRDDNRVFS--- 86
Query: 178 PWDNKVKATGR----RYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLII 345
+ + V TGR L SCDG+VCLY VVNPAT WY+ PL QQL I
Sbjct: 87 -FGSSVARTGRIPNSGPLFCYGSCDGIVCLYGIHTPSIVVNPATGWYQNFPLCNYQQLYI 145
Query: 346 SQ-GQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYV 522
+ + VN KLG GKD + GTYK VWLYNSS L+NATTCE+FDF +NAWRYV
Sbjct: 146 PRFDKKDVNFPSP--KLGLGKDKLTGTYKPVWLYNSSIFGLENATTCELFDFTTNAWRYV 203
Query: 523 TPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNP 702
++PY++ PV++DGSL+W TDCEE K++S DLHTE FQVI K PF +H +P
Sbjct: 204 VLASPYQINAYHKPVYLDGSLYWFTDCEEPKVLSLDLHTETFQVI-CKAPF---AHPCDP 259
Query: 703 YAMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTSILYDCPTVCAFRPL 882
+ +C LDNRLCVS K P QVIWS + KTW ++ IDL T + P A P+
Sbjct: 260 RQLTMCILDNRLCVSEKKWPTQVIWSFHPSGKTWNQMCCIDLTQTFSWFGVPKF-ALSPI 318
Query: 883 LFLD 894
+D
Sbjct: 319 AIMD 322
>gi|15220334|ref|NP_172594.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 312
Score = 233 bits (594), Expect = 4e-059
Identities = 133/272 (48%), Positives = 169/272 (62%), Gaps = 22/272 (8%)
Frame = +1
Query: 4 FKSVSKQWKSTIESRYFQERQ-SKQSGGGDPDVLMVSSSCDESL--RTLVLGPS--SSVK 168
FK VS QWKSTIES+ FQERQ ++ PDVL+VS + DE R V G S S+ +
Sbjct: 55 FKCVSNQWKSTIESQCFQERQLIRRMESRGPDVLVVSFADDEDKYGRKAVFGSSIVSTFR 114
Query: 169 IPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIIS 348
PT L+ SC+GL+C+Y VVNPAT+W+R PLS LQQ +
Sbjct: 115 FPT----------LHTLICYGSCEGLICIYCVYSPNIVVNPATKWHRSCPLSNLQQFLDD 164
Query: 349 QGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTP 528
+ + KL FGKD + GTYK VWLYNSSE LD+ TTCEVFDF +NAWRYV P
Sbjct: 165 KFEK-KEYDFPTPKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSNNAWRYVHP 223
Query: 529 SAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPYA 708
++PYR+ DPV+ DGS+HWLT+ +E+K++SF LHTE FQV+ P + +P
Sbjct: 224 ASPYRINDYQDPVYSDGSVHWLTEGKESKILSFHLHTETFQVLCEAPFL----RERDPVG 279
Query: 709 MVLCNLDNRLCVSHMKSPDQVIWSLNS--GNK 798
+C LDNRLCVS + P Q+IWSL+S GNK
Sbjct: 280 DSMCILDNRLCVSEINGPAQLIWSLDSSGGNK 311
>gi|3859605|gb|AAC72871.1| T15B16.15 gene product [Arabidopsis thaliana]
Length = 311
Score = 229 bits (582), Expect = 1e-057
Identities = 136/291 (46%), Positives = 176/291 (60%), Gaps = 38/291 (13%)
Frame = +1
Query: 232 SCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIISQGQSYVNTKHGLFKLGFGKDI 411
+CDGL+CLY+ VVNP TRW+R PLS Q+L + Q KLGFGKD
Sbjct: 32 TCDGLICLYNTYAWNIVVNPTTRWHREFPLSTFQRLDRYEHQV---GSVSWAKLGFGKDK 88
Query: 412 IIGTYKLVWLYNSSEI--------DLDN-----------ATTCEVFDFVSNAWRYVTPSA 534
I GTYK VWLYNS+E+ D D+ +T C+VFDF + AWR+V P++
Sbjct: 89 INGTYKPVWLYNSAELGGLNDDDEDYDDISIICQGNNNTSTFCQVFDFTTKAWRFVVPAS 148
Query: 535 PYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPYAMV 714
PYR++ DPV+VDGSLHWLT T ++SFDLHTE FQV+ SK PF + HD + ++
Sbjct: 149 PYRILPYQDPVYVDGSLHWLT----TNVLSFDLHTETFQVV-SKAPF-LHHHDYSSRELI 202
Query: 715 LCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTSILYDCPTVCAFRPLLFLD 894
+CNLD+RLCVS P+QVIWSL+S +KTW++IYSIDL +TS L+ A RPL D
Sbjct: 203 MCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEIYSIDLNITSSLFG-SNGFALRPLAVFD 261
Query: 895 AKTKDKKKKKNLLFYDSVKSGYLLIHDPETLLDDFTFR-ADVSMGFLVCYF 1044
KDK LLF + LL HDP+T +F +R + +CYF
Sbjct: 262 ---KDK-----LLFCEPEYGDQLLTHDPKTKSYEFDYRFFSPTTALPLCYF 304
>gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 309
Score = 217 bits (551), Expect = 4e-054
Identities = 128/264 (48%), Positives = 163/264 (61%), Gaps = 21/264 (7%)
Frame = +1
Query: 46 RYFQERQ---SKQSGGGDPDVLMVSSSCDESLRTLVLGPSSSVKIPTPWDNKVKATGR-- 210
R+ ERQ QS G PDVL+VS + D + ++ + + + + +T R
Sbjct: 52 RFKSERQLIRRMQSRG--PDVLVVSFADDNN-----GDDEATTERRIVFGSSIVSTFRFP 104
Query: 211 --RYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIISQGQSYVNTKHGL 384
L+ SCDGLVC+Y VVNPAT+W+R PLS LQQ +I +
Sbjct: 105 TWNTLLCYGSCDGLVCIYCFYSPNIVVNPATKWHRSCPLSNLQQFLIDKYDKQ-ECDFPD 163
Query: 385 FKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTPSAPYRVVGVADP 564
KLGFGKD + GT+K VWLYNSSE LDN TTCEVFDF +NAWRYV P++PYR+ DP
Sbjct: 164 PKLGFGKDKLKGTFKQVWLYNSSEFGLDNVTTCEVFDFSTNAWRYVHPASPYRINDYQDP 223
Query: 565 VFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPYAMVLCNLDNRLCV 744
V+ DGSLHWLT+ +E K++SFDLHTE FQVI K PF + +P +C LDNRLCV
Sbjct: 224 VYFDGSLHWLTEGKECKILSFDLHTETFQVI-CKAPFLC---ERDPVGDTMCILDNRLCV 279
Query: 745 SHMKSPDQVIWSLNS--GNKTWEK 810
S + Q+IWSL+S GNKTW+K
Sbjct: 280 SEINGSAQLIWSLDSSGGNKTWKK 303
>gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 216 bits (548), Expect = 9e-054
Identities = 107/165 (64%), Positives = 124/165 (75%), Gaps = 5/165 (3%)
Frame = +1
Query: 352 GQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTPS 531
G +Y KH FKL FGKD GT+K VWLYNSSEI + NATTCEVFDF +NAWRYVTPS
Sbjct: 116 GVAYFKLKHPHFKLAFGKDTFSGTFKPVWLYNSSEISIQNATTCEVFDFSTNAWRYVTPS 175
Query: 532 APYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAFQVISSKPPFPANSHDDNPYAM 711
APYRV+G+ DPVF+DGSLHW TDC+ETK++S DLHTEAFQVI SK PF H PY +
Sbjct: 176 APYRVLGLPDPVFLDGSLHWFTDCQETKILSMDLHTEAFQVI-SKAPFA--DHVVRPYDI 232
Query: 712 VLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSIDLVMTSIL 846
V+CNLDNRLCVS MK P+Q+IWS NS T S+ L+ S+L
Sbjct: 233 VMCNLDNRLCVSEMKWPNQLIWSFNS--PTRHGTNSVPLIFISLL 275
>gi|15221369|ref|NP_172711.1| F-box associated ubiquitination effector family
protein [Arabidopsis thaliana]
Length = 352
Score = 186 bits (470), Expect = 1e-044
Identities = 94/145 (64%), Positives = 108/145 (74%), Gaps = 7/145 (4%)
Frame = +1
Query: 130 LRTLVLGPSSSVKIPTPWD-------NKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVN 288
L TLVLG SSSV IPTPW+ K K +LVS +SCDGLVCLY +SGYVVN
Sbjct: 65 LTTLVLGSSSSVTIPTPWEKDKEKEKEKEKEDEEFFLVSFDSCDGLVCLYKYWKSGYVVN 124
Query: 289 PATRWYRPLPLSRLQQLIISQGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLD 468
P TRWYRPLPLS+LQQL+IS G+S + + +GFGKD I GTYK VWLYNS EI L+
Sbjct: 125 PTTRWYRPLPLSQLQQLLISLGRSVFELGYTVCDIGFGKDKITGTYKPVWLYNSLEIGLE 184
Query: 469 NATTCEVFDFVSNAWRYVTPSAPYR 543
NATTCEVFDF +NAWRYV+P+APYR
Sbjct: 185 NATTCEVFDFNTNAWRYVSPTAPYR 209
>gi|8778634|gb|AAF79642.1|AC025416_16 F5O11.24 [Arabidopsis thaliana]
Length = 361
Score = 186 bits (470), Expect = 1e-044
Identities = 94/145 (64%), Positives = 108/145 (74%), Gaps = 7/145 (4%)
Frame = +1
Query: 130 LRTLVLGPSSSVKIPTPWD-------NKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVN 288
L TLVLG SSSV IPTPW+ K K +LVS +SCDGLVCLY +SGYVVN
Sbjct: 74 LTTLVLGSSSSVTIPTPWEKDKEKEKEKEKEDEEFFLVSFDSCDGLVCLYKYWKSGYVVN 133
Query: 289 PATRWYRPLPLSRLQQLIISQGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLD 468
P TRWYRPLPLS+LQQL+IS G+S + + +GFGKD I GTYK VWLYNS EI L+
Sbjct: 134 PTTRWYRPLPLSQLQQLLISLGRSVFELGYTVCDIGFGKDKITGTYKPVWLYNSLEIGLE 193
Query: 469 NATTCEVFDFVSNAWRYVTPSAPYR 543
NATTCEVFDF +NAWRYV+P+APYR
Sbjct: 194 NATTCEVFDFNTNAWRYVSPTAPYR 218
>gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana]
Length = 391
Score = 159 bits (401), Expect = 1e-036
Identities = 81/149 (54%), Positives = 107/149 (71%), Gaps = 6/149 (4%)
Frame = +1
Query: 466 DNATTCEVFDFVSNAWRYVTPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEA 645
+ +T CEVFDF + AWR+V P++PYR++ DPV+VDGSLHWLT+ E T ++SFDLH E
Sbjct: 202 NTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLHAET 261
Query: 646 FQVISSKPPFPANSHDDNPYAMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSID 825
FQV+ SK PF + HD + +++CNLD+RLCVS P+QVIWSL+S +KTW++IYSID
Sbjct: 262 FQVV-SKAPF-LHHHDYSSRELIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEIYSID 319
Query: 826 LVMTSILYDCPTVCAFRPLLFLDAKTKDK 912
L +TS L+ A RPL D KDK
Sbjct: 320 LNITSSLFG-SNGFALRPLGVFD---KDK 344
>gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis thaliana]
Length = 391
Score = 159 bits (400), Expect = 1e-036
Identities = 80/149 (53%), Positives = 107/149 (71%), Gaps = 6/149 (4%)
Frame = +1
Query: 466 DNATTCEVFDFVSNAWRYVTPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEA 645
+ +T CEVFDF + AWR+V P++PYR++ DPV+VDGSLHWLT+ E T ++SFDLH E
Sbjct: 202 NTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLHAET 261
Query: 646 FQVISSKPPFPANSHDDNPYAMVLCNLDNRLCVSHMKSPDQVIWSLNSGNKTWEKIYSID 825
FQV+ SK PF + HD + +++CNLD+RLCVS P+QVIWSL+S +KTW+++YSID
Sbjct: 262 FQVV-SKAPF-LHHHDYSSRELIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEVYSID 319
Query: 826 LVMTSILYDCPTVCAFRPLLFLDAKTKDK 912
L +TS L+ A RPL D KDK
Sbjct: 320 LNITSSLFG-SNGFALRPLGVFD---KDK 344
>gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 145 bits (364), Expect = 2e-032
Identities = 72/135 (53%), Positives = 93/135 (68%), Gaps = 6/135 (4%)
Frame = +1
Query: 307 RPLPLSRLQQLIISQGQS-YVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNA--- 474
RP+ S L+ + G + +++ +GFGKD I GTYK VWLY+S EI L+NA
Sbjct: 8 RPILHSGLEWWVSLDGTALFLSANFDELDIGFGKDKITGTYKPVWLYSSLEIGLENARFS 67
Query: 475 --TTCEVFDFVSNAWRYVTPSAPYRVVGVADPVFVDGSLHWLTDCEETKLVSFDLHTEAF 648
TTCEVFDF ++AWRYV+P+APYRV G + P+ +DGSLHW DCEETK++SFDLHTE F
Sbjct: 68 TLTTCEVFDFNTDAWRYVSPAAPYRVFGNSKPICIDGSLHWFNDCEETKILSFDLHTETF 127
Query: 649 QVISSKPPFPANSHD 693
QV+S P N+ D
Sbjct: 128 QVVSKAPFTNVNAFD 142
>gi|42571441|ref|NP_973811.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 223
Score = 140 bits (352), Expect = 5e-031
Identities = 85/180 (47%), Positives = 105/180 (58%), Gaps = 16/180 (8%)
Frame = +1
Query: 4 FKSVSKQWKSTIESRYFQERQ-SKQSGGGDPDVLMVSSSCDESL--RTLVLGPS--SSVK 168
FK VS QWKSTIES+ FQERQ ++ PDVL+VS + DE R V G S S+ +
Sbjct: 55 FKCVSNQWKSTIESQCFQERQLIRRMESRGPDVLVVSFADDEDKYGRKAVFGSSIVSTFR 114
Query: 169 IPTPWDNKVKATGRRYLVSDNSCDGLVCLYHPLESGYVVNPATRWYRPLPLSRLQQLIIS 348
PT L+ SC+GL+C+Y VVNPAT+W+R PLS LQQ +
Sbjct: 115 FPT----------LHTLICYGSCEGLICIYCVYSPNIVVNPATKWHRSCPLSNLQQFLDD 164
Query: 349 QGQSYVNTKHGLFKLGFGKDIIIGTYKLVWLYNSSEIDLDNATTCEVFDFVSNAWRYVTP 528
+ + KL FGKD + GTYK VWLYNSSE LD+ TTCEVFDF +NAW + P
Sbjct: 165 KFEK-KEYDFPTPKLAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSNNAWSSLPP 223
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,383,062,991,470
Number of Sequences: 15229318
Number of Extensions: 2383062991470
Number of Successful Extensions: 601402404
Number of sequences better than 0.0: 0
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