BLASTX 7.6.2
Query= UN20246 /QuerySize=478
(477 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15237617|ref|NP_201219.1| 40S ribosomal protein S28-2 [Arabid... 126 1e-027
gi|15232831|ref|NP_187620.1| 40S ribosomal protein S28-1 [Arabid... 125 2e-027
gi|224100565|ref|XP_002311925.1| predicted protein [Populus tric... 115 2e-024
gi|255559537|ref|XP_002520788.1| ribosomal protein S28, putative... 115 2e-024
gi|224138170|ref|XP_002322747.1| predicted protein [Populus tric... 114 5e-024
gi|330318585|gb|AEC10961.1| ribosomal protein s28 [Camellia sine... 113 6e-024
gi|3947725|emb|CAA10104.1| ribosomal protein S28 [Prunus persica] 113 8e-024
gi|3947719|emb|CAA10101.1| ribosomal protein S28 [Prunus persica] 113 8e-024
gi|21902507|gb|AAM78552.1|AF522185_1 ribosomal protein small sub... 112 1e-023
gi|297739775|emb|CBI29957.3| unnamed protein product [Vitis vini... 112 2e-023
gi|225441579|ref|XP_002281508.1| PREDICTED: hypothetical protein... 111 2e-023
gi|225441581|ref|XP_002281530.1| PREDICTED: hypothetical protein... 111 3e-023
gi|147820340|emb|CAN63104.1| hypothetical protein VITISV_038369 ... 107 3e-022
gi|40287500|gb|AAR83864.1| 28 kDa small subunit ribosomal protei... 107 4e-022
gi|225427429|ref|XP_002265669.1| PREDICTED: hypothetical protein... 106 8e-022
gi|87240661|gb|ABD32519.1| Ribosomal protein S28e [Medicago trun... 104 5e-021
gi|166007601|gb|ABY77634.1| At5g03850 [Arabidopsis thaliana] 104 5e-021
gi|147795546|emb|CAN67744.1| hypothetical protein VITISV_030422 ... 97 4e-019
gi|61654758|gb|AAX48905.1| S28 [Suberites domuncula] 91 4e-017
gi|340380317|ref|XP_003388669.1| PREDICTED: 40S ribosomal protei... 90 7e-017
>gi|15237617|ref|NP_201219.1| 40S ribosomal protein S28-2 [Arabidopsis
thaliana]
Length = 64
Score = 126 bits (314), Expect = 1e-027
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDILTLLESEREA 236
MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGD+LTLLESEREA
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDVLTLLESEREA 60
Query: 237 RRLR 248
RRLR
Sbjct: 61 RRLR 64
>gi|15232831|ref|NP_187620.1| 40S ribosomal protein S28-1 [Arabidopsis
thaliana]
Length = 64
Score = 125 bits (312), Expect = 2e-027
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDILTLLESEREA 236
MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDR+IMRNVKGPVREGDILTLLESEREA
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRYIMRNVKGPVREGDILTLLESEREA 60
Query: 237 RRLR 248
RRLR
Sbjct: 61 RRLR 64
>gi|224100565|ref|XP_002311925.1| predicted protein [Populus trichocarpa]
Length = 65
Score = 115 bits (287), Expect = 2e-024
Identities = 60/65 (92%), Positives = 62/65 (95%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
MDSQIKHAVVVK+MGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MDSQIKHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|255559537|ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus
communis]
Length = 65
Score = 115 bits (287), Expect = 2e-024
Identities = 60/65 (92%), Positives = 62/65 (95%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGD+LTLLESERE
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|224138170|ref|XP_002322747.1| predicted protein [Populus trichocarpa]
Length = 65
Score = 114 bits (283), Expect = 5e-024
Identities = 58/65 (89%), Positives = 62/65 (95%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDS-DRFIMRNVKGPVREGDILTLLESERE 233
MDSQIKHAVV+K+MGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGD+LTLLESERE
Sbjct: 1 MDSQIKHAVVMKIMGRTGSRGQVTQVRVKFLDDPNRFIMRNVKGPVREGDVLTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|330318585|gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
Length = 65
Score = 113 bits (282), Expect = 6e-024
Identities = 58/65 (89%), Positives = 62/65 (95%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGD+LTLLESERE
Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|3947725|emb|CAA10104.1| ribosomal protein S28 [Prunus persica]
Length = 65
Score = 113 bits (281), Expect = 8e-024
Identities = 59/65 (90%), Positives = 61/65 (93%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFT-DSDRFIMRNVKGPVREGDILTLLESERE 233
MDS +KHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLGDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|3947719|emb|CAA10101.1| ribosomal protein S28 [Prunus persica]
Length = 65
Score = 113 bits (281), Expect = 8e-024
Identities = 59/65 (90%), Positives = 61/65 (93%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
MDS +KHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|21902507|gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28
[Helianthus annuus]
Length = 65
Score = 112 bits (279), Expect = 1e-023
Identities = 58/65 (89%), Positives = 62/65 (95%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
M+SQIKHAVVVKVMGR+GSRGQVTQVRVKF D +RFIMRNVKGPVREGD+LTLLESERE
Sbjct: 1 MESQIKHAVVVKVMGRSGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|297739775|emb|CBI29957.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 112 bits (278), Expect = 2e-023
Identities = 58/66 (87%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +3
Query: 54 RMDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESER 230
+M+S +KHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESER
Sbjct: 46 KMESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESER 105
Query: 231 EARRLR 248
EARRLR
Sbjct: 106 EARRLR 111
>gi|225441579|ref|XP_002281508.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 65
Score = 111 bits (277), Expect = 2e-023
Identities = 58/65 (89%), Positives = 61/65 (93%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
MD+ +KHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MDAGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|225441581|ref|XP_002281530.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 65
Score = 111 bits (276), Expect = 3e-023
Identities = 58/65 (89%), Positives = 61/65 (93%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
M+S +KHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|147820340|emb|CAN63104.1| hypothetical protein VITISV_038369 [Vitis
vinifera]
Length = 62
Score = 107 bits (267), Expect = 3e-022
Identities = 56/61 (91%), Positives = 58/61 (95%), Gaps = 1/61 (1%)
Frame = +3
Query: 69 IKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESEREARRL 245
+KHAVVVKVMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESEREARRL
Sbjct: 2 VKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARRL 61
Query: 246 R 248
R
Sbjct: 62 R 62
>gi|40287500|gb|AAR83864.1| 28 kDa small subunit ribosomal protein [Capsicum
annuum]
Length = 65
Score = 107 bits (266), Expect = 4e-022
Identities = 56/65 (86%), Positives = 59/65 (90%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
M+ KHAVVVK+MGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MEXCTKHAVVVKIMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|225427429|ref|XP_002265669.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 65
Score = 106 bits (264), Expect = 8e-022
Identities = 55/65 (84%), Positives = 60/65 (92%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESERE 233
M+S +KHA+VVKVMGRT SRGQVTQ+RVKF D +RFIMRNVKGPVREGDILTLLESERE
Sbjct: 1 MESGVKHAMVVKVMGRTSSRGQVTQMRVKFLDDQNRFIMRNVKGPVREGDILTLLESERE 60
Query: 234 ARRLR 248
ARRLR
Sbjct: 61 ARRLR 65
>gi|87240661|gb|ABD32519.1| Ribosomal protein S28e [Medicago truncatula]
Length = 72
Score = 104 bits (257), Expect = 5e-021
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = +3
Query: 54 RMDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDILTLLESERE 233
+M+SQIKHA V KVMGRTGSRGQVTQVRVK +R+IMRNVKGP+R+GD++ LLESERE
Sbjct: 8 KMESQIKHAQVEKVMGRTGSRGQVTQVRVKILHENRYIMRNVKGPIRKGDVIALLESERE 67
Query: 234 ARRLR 248
ARRLR
Sbjct: 68 ARRLR 72
>gi|166007601|gb|ABY77634.1| At5g03850 [Arabidopsis thaliana]
Length = 52
Score = 104 bits (257), Expect = 5e-021
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDILT 212
MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDR+IMRNVKGPVREGDILT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRYIMRNVKGPVREGDILT 52
>gi|147795546|emb|CAN67744.1| hypothetical protein VITISV_030422 [Vitis
vinifera]
Length = 61
Score = 97 bits (241), Expect = 4e-019
Identities = 51/61 (83%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +3
Query: 69 IKHAVVVKVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDILTLLESEREARRL 245
+KHA+VVK MGRT SR QVTQ RVKF D +RFIMRNVKGPVREGDILTLLESEREARRL
Sbjct: 1 VKHAMVVKXMGRTSSRXQVTQXRVKFLDDQNRFIMRNVKGPVREGDILTLLESEREARRL 60
Query: 246 R 248
R
Sbjct: 61 R 61
>gi|61654758|gb|AAX48905.1| S28 [Suberites domuncula]
Length = 63
Score = 91 bits (223), Expect = 4e-017
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +3
Query: 72 KHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDILTLLESEREARRLR 248
++A V+K++GRTGS+GQ TQVRV+F D R I+RNVKGPVREGD+L LLESEREARRLR
Sbjct: 5 RYAKVIKILGRTGSQGQATQVRVEFLDDGRAIIRNVKGPVREGDVLCLLESEREARRLR 63
>gi|340380317|ref|XP_003388669.1| PREDICTED: 40S ribosomal protein S28-like
[Amphimedon queenslandica]
Length = 84
Score = 90 bits (221), Expect = 7e-017
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +3
Query: 57 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFTDSDRFIMRNVKGPVREGDILTLLESEREA 236
MD + ++ V+K++GRTGS+GQ TQVRV+F D R I+RNVKGPVREGD+L LLE EREA
Sbjct: 21 MDQKPRYGKVIKLLGRTGSQGQCTQVRVEFLDDSRSIIRNVKGPVREGDVLCLLECEREA 80
Query: 237 RRLR 248
RRLR
Sbjct: 81 RRLR 84
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,383,062,991,470
Number of Sequences: 15229318
Number of Extensions: 2383062991470
Number of Successful Extensions: 601402404
Number of sequences better than 0.0: 0
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