BLASTX 7.6.2
Query= UN20256 /QuerySize=1122
(1121 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G21190.1 | Symbols: emb1417 | emb1417 (embryo ... 527 5e-150
TAIR9_protein||AT4G18975.1 | Symbols: | pentatricopeptide (PPR)... 176 3e-044
TAIR9_protein||AT4G18975.2 | Symbols: | pentatricopeptide (PPR)... 176 3e-044
TAIR9_protein||AT4G18975.3 | Symbols: | pentatricopeptide (PPR)... 176 3e-044
TAIR9_protein||AT1G04590.1 | Symbols: | FUNCTIONS IN: molecular... 134 2e-031
TAIR9_protein||AT1G04590.2 | Symbols: | FUNCTIONS IN: molecular... 129 5e-030
TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)... 49 7e-006
>TAIR9_protein||AT4G21190.1 | Symbols: emb1417 | emb1417 (embryo defective 1417)
| chr4:11292493-11293763 REVERSE
Length = 308
Score = 527 bits (1357), Expect = 5e-150
Identities = 269/307 (87%), Positives = 285/307 (92%), Gaps = 6/307 (1%)
Frame = +1
Query: 106 MLSLRYSLPY-LPQTKE-STKLFSRRPSNVVVCAARGPRPRSPRVWKTRKRIGSISKSAK 279
MLSLRYSLPY L QT+E STKLF+++P+NVVVCAARGPRPRSPRVWKTRKRIG+ISK+AK
Sbjct: 1 MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60
Query: 280 MIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSK 459
MIACIK LSNVKEEVYGALDSFIAWELEFPLVIVKKAL ILEDE+EWKKIIQVTKWMLSK
Sbjct: 61 MIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSK 120
Query: 460 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHHK 639
GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMH K
Sbjct: 121 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQK 180
Query: 640 LFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWEFRYIKGRRVKV 819
LFEVFADMEELGVKPN+AIV MVGKVF+KL M DKYEKLMKKYPPPQWEFRYIKGRRVKV
Sbjct: 181 LFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKV 240
Query: 820 KAKQLNELSEGEGGLSSDEDKIESKTEEANQDGDDFSEEEE---EGLGANQRQIGTSREP 990
KAKQLNELSEGEGGLSSDEDKI+++ E +DG+D SEEEE E LG +Q QI TSREP
Sbjct: 241 KAKQLNELSEGEGGLSSDEDKIDNEIESEEEDGEDLSEEEEDEKELLGGSQGQI-TSREP 299
Query: 991 CLDHLDS 1011
LDHLDS
Sbjct: 300 SLDHLDS 306
>TAIR9_protein||AT4G18975.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393665 REVERSE
Length = 288
Score = 176 bits (445), Expect = 3e-044
Identities = 85/197 (43%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Frame = +1
Query: 232 VWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDE 411
+WK GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ KAL IL
Sbjct: 85 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144
Query: 412 REWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 591
+W ++IQ+ KWMLSKGQG TMGTY LL A D R DEAE LWN + H PR+
Sbjct: 145 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 204
Query: 592 FNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMKKYP 771
F +MI++Y D+H K+ EVFADMEEL V P+ V + F +L + + ++++Y
Sbjct: 205 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 263
Query: 772 PPQWEFRYIKGRRVKVK 822
++++ Y G RV+VK
Sbjct: 264 LSEYKYIYFNGERVRVK 280
>TAIR9_protein||AT4G18975.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393503 REVERSE
Length = 261
Score = 176 bits (445), Expect = 3e-044
Identities = 85/197 (43%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Frame = +1
Query: 232 VWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDE 411
+WK GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ KAL IL
Sbjct: 58 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 117
Query: 412 REWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 591
+W ++IQ+ KWMLSKGQG TMGTY LL A D R DEAE LWN + H PR+
Sbjct: 118 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 177
Query: 592 FNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMKKYP 771
F +MI++Y D+H K+ EVFADMEEL V P+ V + F +L + + ++++Y
Sbjct: 178 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 236
Query: 772 PPQWEFRYIKGRRVKVK 822
++++ Y G RV+VK
Sbjct: 237 LSEYKYIYFNGERVRVK 253
>TAIR9_protein||AT4G18975.3 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393665 REVERSE
Length = 288
Score = 176 bits (445), Expect = 3e-044
Identities = 85/197 (43%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Frame = +1
Query: 232 VWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDE 411
+WK GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ KAL IL
Sbjct: 85 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144
Query: 412 REWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 591
+W ++IQ+ KWMLSKGQG TMGTY LL A D R DEAE LWN + H PR+
Sbjct: 145 SQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHTHTRSIPRRL 204
Query: 592 FNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMKKYP 771
F +MI++Y D+H K+ EVFADMEEL V P+ V + F +L + + ++++Y
Sbjct: 205 FARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEENRKLILRRY- 263
Query: 772 PPQWEFRYIKGRRVKVK 822
++++ Y G RV+VK
Sbjct: 264 LSEYKYIYFNGERVRVK 280
>TAIR9_protein||AT1G04590.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: emb1417 (embryo
defective 1417) (TAIR:AT4G21190.1); Has 54 Blast hits to 54 proteins in
8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
chr1:1258760-1261411 REVERSE
Length = 382
Score = 134 bits (335), Expect = 2e-031
Identities = 82/247 (33%), Positives = 133/247 (53%), Gaps = 8/247 (3%)
Frame = +1
Query: 223 SPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAIL 402
+PR + + I K ++ + ++ + KE VYGALD+++AWE FP+ +K +A L
Sbjct: 130 NPRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASL 189
Query: 403 EDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTP 582
E E +W +++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K L P
Sbjct: 190 EKEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVP 249
Query: 583 RKFFNKMISIYYKRDMHHKLFEVFADMEELGVK-PNIAIVDMVGKVFLKLGMNDKYEKLM 759
+ +M+ IY++ +M +L ++F D+E K P+ IV V + LGM D+ E+++
Sbjct: 250 WQLCLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVV 309
Query: 760 KKYP-----PPQWEFRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIESKTEEANQDGDD 924
KY P + R+ K ++ E + EG + + + +I+ + +E N D
Sbjct: 310 TKYSHLLLGTPSDDKPSRSSRKKKKPELRIPEATT-EGAVDAAKAEIQEERKE-NLDNHQ 367
Query: 925 FSEEEEE 945
SE E
Sbjct: 368 ESEAATE 374
>TAIR9_protein||AT1G04590.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G18975.3); Has 54 Blast hits
to 54 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:1258760-1261411 REVERSE
Length = 385
Score = 129 bits (322), Expect = 5e-030
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 4/186 (2%)
Frame = +1
Query: 223 SPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAIL 402
+PR + + I K ++ + ++ + KE VYGALD+++AWE FP+ +K +A L
Sbjct: 130 NPRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASL 189
Query: 403 EDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTP 582
E E +W +++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K L P
Sbjct: 190 EKEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVP 249
Query: 583 RKFFNKMISIYYKRDMHHKLFEV---FADMEELGVK-PNIAIVDMVGKVFLKLGMNDKYE 750
+ +M+ IY++ +M +L +V F D+E K P+ IV V + LGM D+ E
Sbjct: 250 WQLCLQMMRIYFRNNMLQELVKVMKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKE 309
Query: 751 KLMKKY 768
+++ KY
Sbjct: 310 RVVTKY 315
>TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:654102-656561 FORWARD
Length = 820
Score = 49 bits (114), Expect = 7e-006
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Frame = +1
Query: 280 MIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSK 459
+I C K ++ +E + A + V L + K+ ++V M+
Sbjct: 285 LITCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 460 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF-FNKMISIYYKRDMHH 636
G ++ TY SL++A A D LDEA EL N+ M P F + ++S + +
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQ--MAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 637 KLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMK 762
+F +M G KPNI + K++ G K+ ++MK
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMY---GNRGKFTEMMK 440
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,552,300,124
Number of Sequences: 33410
Number of Extensions: 10552300124
Number of Successful Extensions: 359139626
Number of sequences better than 0.0: 0
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