BLASTX 7.6.2
Query= UN20263 /QuerySize=1027
(1026 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FJK6|CCC11_ARATH Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYC... 450 1e-125
sp|Q9FJK7|CCC12_ARATH Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYC... 377 1e-103
sp|P93411|CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp. japonic... 335 3e-091
sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cyc... 191 6e-048
sp|Q6CAC7|SSN8_YARLI RNA polymerase II holoenzyme cyclin-like su... 116 4e-025
sp|Q2UDB2|SSN8_ASPOR RNA polymerase II holoenzyme cyclin-like su... 112 5e-024
sp|Q0CV29|SSN8_ASPTN RNA polymerase II holoenzyme cyclin-like su... 110 2e-023
sp|Q4WZT9|SSN8_ASPFU RNA polymerase II holoenzyme cyclin-like su... 109 3e-023
sp|Q62447|CCNC_MOUSE Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=3 109 4e-023
sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2 108 7e-023
sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1 108 7e-023
sp|Q28F72|CCNC_XENTR Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2... 108 7e-023
sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1 108 9e-023
sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1 108 9e-023
sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2 108 9e-023
sp|A1C7R6|SSN8_ASPCL RNA polymerase II holoenzyme cyclin-like su... 107 1e-022
sp|Q6BYF8|SSN8_DEBHA RNA polymerase II holoenzyme cyclin-like su... 101 1e-020
sp|Q6CP20|SSN8_KLULA RNA polymerase II holoenzyme cyclin-like su... 99 4e-020
sp|A3LPX1|SSN8_PICST RNA polymerase II holoenzyme cyclin-like su... 98 1e-019
>sp|Q9FJK6|CCC11_ARATH Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYCC1-1 PE=2 SV=2
Length = 253
Score = 450 bits (1155), Expect = 1e-125
Identities = 223/252 (88%), Positives = 241/252 (95%), Gaps = 1/252 (0%)
Frame = +1
Query: 103 MAANFWESSQCKRLLEQEEVDVVHPLDKERGITVEDFKLIKFHMSNHITKLAQHIKVRQR 282
MAANFW SS K+LL+ EEVDVVH LDKERGI+++DFKLIKFHMSNHI KLAQHIKVRQR
Sbjct: 1 MAANFWNSSHYKQLLDPEEVDVVHDLDKERGISIDDFKLIKFHMSNHIMKLAQHIKVRQR 60
Query: 283 VVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKRLYPDEY- 459
VVATAITYMRRVY +KSMVEF+PRLVA+TCLYLASKAEESIVQARNLVFYIKRLYPDEY
Sbjct: 61 VVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYN 120
Query: 460 KYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVNDTYKMD 639
KYELKD+LGMEMKVLEAL+Y LVVFHPYRSLSEFLQDAALNDVNMNQ+TWGIVNDTYKMD
Sbjct: 121 KYELKDILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALNDVNMNQITWGIVNDTYKMD 180
Query: 640 LILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYRSITDE 819
LILVHPPYRIALACIYIASVHREKDITAW +DL+EDMNLVKNIAMEILDFYENYR+IT+E
Sbjct: 181 LILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTITEE 240
Query: 820 KVSSAFNKLTMK 855
KV+SAF+KL +K
Sbjct: 241 KVNSAFSKLALK 252
>sp|Q9FJK7|CCC12_ARATH Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1
Length = 253
Score = 377 bits (966), Expect = 1e-103
Identities = 178/253 (70%), Positives = 219/253 (86%), Gaps = 1/253 (0%)
Frame = +1
Query: 103 MAANFWESSQCKRLLEQEEVDVVHPLDKERGITVEDFKLIKFHMSNHITKLAQHIKVRQR 282
MA+NFW S+ K L + EEV+VVHPLD +RGI+VEDF+LIK HMSN+I+KLAQHIK+RQR
Sbjct: 1 MASNFWTSTHYKELKDPEEVNVVHPLDAQRGISVEDFRLIKLHMSNYISKLAQHIKIRQR 60
Query: 283 VVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKRLYPDE-Y 459
VVATA+TYMRRVYT+KS+ E++PRLVA TCLYLA KAEES+V A+ LVFY+K+LY DE +
Sbjct: 61 VVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKLLVFYMKKLYADEKF 120
Query: 460 KYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVNDTYKMD 639
+YE+KD+L MEMKVLEALN+ LVVFHPYRSL EFLQD+ +ND +M +TWG+VNDTY+MD
Sbjct: 121 RYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEFLQDSGINDTSMTHLTWGLVNDTYRMD 180
Query: 640 LILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYRSITDE 819
LIL+HPP+ I LACIYIASVH+EKDI W ++L+ DMN+VKNIAMEILDFYEN+R T+E
Sbjct: 181 LILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEE 240
Query: 820 KVSSAFNKLTMKP 858
+V +AFNKL P
Sbjct: 241 RVHAAFNKLATNP 253
>sp|P93411|CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp. japonica
GN=Os09g0504400 PE=2 SV=1
Length = 257
Score = 335 bits (859), Expect = 3e-091
Identities = 165/258 (63%), Positives = 206/258 (79%), Gaps = 9/258 (3%)
Frame = +1
Query: 103 MAANFWESSQCKRLLEQEEVDVVHPLDKERGITVEDFKLIKFHMSNHITKLAQHIKVRQR 282
MAANFW SS CK+LL+QE+VD V D +RGIT+E+F+L+K HMS HI +LAQ +KVRQR
Sbjct: 1 MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITLEEFRLVKIHMSFHIWRLAQQVKVRQR 60
Query: 283 VVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKRL--YPDE 456
V+ATA+TY RRVYT+KSM E+DPRLVA TCLYLASK EES VQAR LVFYIK++ ++
Sbjct: 61 VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASDEK 120
Query: 457 YKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVNDTYKM 636
Y++E+KD+L MEMK+LEAL+Y LVV+HPYR L + LQDA + D + Q WGIVNDTYKM
Sbjct: 121 YRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAGITD--LTQFAWGIVNDTYKM 178
Query: 637 DLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENY----- 801
DLIL+HPPY IALACIYIASV ++KDIT W ++L DMN+VKNI+MEILDFY+ Y
Sbjct: 179 DLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQ 238
Query: 802 RSITDEKVSSAFNKLTMK 855
R + ++K++ NKL K
Sbjct: 239 RGLPEDKIAPVMNKLPSK 256
>sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cycC PE=3 SV=1
Length = 255
Score = 191 bits (485), Expect = 6e-048
Identities = 98/255 (38%), Positives = 164/255 (64%), Gaps = 7/255 (2%)
Frame = +1
Query: 103 MAANFWESSQCKR-LLEQEEVDVVHPLDKERGITVEDFKLIKFHMSNHITKLAQHIKVRQ 279
MAANFWESS C LL++ +++ +P DK+ +T + K ++ H I L +K+RQ
Sbjct: 1 MAANFWESSHCTEWLLDRNKIEESNPKDKQY-LTPIELKKLRTHYCFVIQNLGNALKLRQ 59
Query: 280 RVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKRLYPDEY 459
R ++TAI Y +R Y K S V+ +PRLVA+TCLYL+SK EE I QA+ +K + +
Sbjct: 60 RAISTAIVYFKRFYLKNSFVDCEPRLVAVTCLYLSSKVEECITQAKKCAAKMKEI-DHSF 118
Query: 460 KYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVNDTYKMD 639
Y + D+L E VLE L++ L+++HPY+SL +LQ + L+ ++ ++ WGIVND+Y+ D
Sbjct: 119 NYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGLDPASI-EIIWGIVNDSYRTD 177
Query: 640 LILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFY--ENYRSIT 813
+ L++PP+ + L CI + S +KDI WL +LN +M + ++ +++D+Y E +S+
Sbjct: 178 VCLLYPPFVVGLGCILLGSYLLKKDIKQWLSELNVEMKDIWEVSKDLIDYYEFEKQQSLQ 237
Query: 814 DE-KVSSAFNKLTMK 855
++ ++ +NKL ++
Sbjct: 238 NQSELDLLYNKLPIR 252
>sp|Q6CAC7|SSN8_YARLI RNA polymerase II holoenzyme cyclin-like subunit
OS=Yarrowia lipolytica GN=SSN8 PE=3 SV=1
Length = 280
Score = 116 bits (288), Expect = 4e-025
Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 16/216 (7%)
Frame = +1
Query: 103 MAANFWESSQCKRLLEQEEV---------DVVHPLDKERGITVEDFKLIKFHMSNHITKL 255
M+AN+W SSQ L +E D+ P K + I + ++ ++ I L
Sbjct: 1 MSANYWTSSQRLHWLLTKETLAERRKGLEDIFDP-GKLQTIKALNPWHVRVYLHTLIHLL 59
Query: 256 AQHIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYI 435
Q++ +RQR++ATA Y+ R +TK E +P LV T +Y+A K EE R +
Sbjct: 60 GQNLSIRQRILATAEVYLTRFHTKVPFGEINPYLVVATAVYVACKVEEHPQHIRTITSEA 119
Query: 436 KRLYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMN------ 597
+ L+PD ++ + E ++E L LV+FHPY+SL + A ++ +
Sbjct: 120 RSLWPDYISHDPTKIAECEFYLIEELGTYLVIFHPYKSLMQISDAMARSNAQITMAPEEI 179
Query: 598 QMTWGIVNDTYKMDLILVHPPYRIALACIYIASVHR 705
Q+TW ++ND+Y DL L++PP+ +A+ACIY+ V R
Sbjct: 180 QVTWSMINDSYITDLHLLNPPHIVAMACIYMTVVLR 215
>sp|Q2UDB2|SSN8_ASPOR RNA polymerase II holoenzyme cyclin-like subunit
OS=Aspergillus oryzae GN=ssn8 PE=3 SV=2
Length = 301
Score = 112 bits (279), Expect = 5e-024
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 8/208 (3%)
Frame = +1
Query: 103 MAANFWESSQCKR-LLEQEEVDVVHPLDKERG------ITVEDFKLIKFHMSNHITKLAQ 261
MAAN+W S+Q + L +E + + +ER + D +L+ + S + KL +
Sbjct: 1 MAANYWASTQRRHWLFTKERLADIRESFRERDKAAHSQFPLPDQRLLNIYFSQQLIKLGK 60
Query: 262 HIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKR 441
+ RQ+ +ATA Y++R YTK + +P LV T YLA K EE R +V +
Sbjct: 61 RMSTRQQALATAQVYIKRFYTKNEIRHTNPYLVVTTAFYLACKMEECPQHIRFVVAEARN 120
Query: 442 LYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVN 621
+P+ ++ L E ++ +N L+V HPYR+LSE + +L + + W ++N
Sbjct: 121 FWPEFIAPDVSKLGECEFALISEMNSQLIVHHPYRTLSELQPELSLTSDEV-ALAWSVIN 179
Query: 622 DTYKMDLILVHPPYRIALACIYIASVHR 705
D Y DL L++PP+ IA+ I +A V +
Sbjct: 180 DHYLTDLPLLYPPHVIAVMAIIVAVVFK 207
>sp|Q0CV29|SSN8_ASPTN RNA polymerase II holoenzyme cyclin-like subunit
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ssn8 PE=3
SV=1
Length = 301
Score = 110 bits (273), Expect = 2e-023
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 8/208 (3%)
Frame = +1
Query: 103 MAANFWESSQCKR-LLEQEEVDVVHPLDKERG------ITVEDFKLIKFHMSNHITKLAQ 261
MAAN+W S+Q + L +E + + KER + D +L+ + S + KL +
Sbjct: 1 MAANYWVSTQRRHWLFTRERLADIREGFKERDKVAHSQFPLPDQRLLNIYFSQQLIKLGK 60
Query: 262 HIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKR 441
RQ+ +ATA Y++R YTK + +P LV T YLA K EE R +V +
Sbjct: 61 RTTTRQQALATAQVYIKRFYTKNDIRHTNPYLVITTAFYLACKMEECPQHIRFVVAEARS 120
Query: 442 LYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVN 621
+P+ ++ L E ++ +N L+V HPYR+LSE + L + + W ++N
Sbjct: 121 FWPEFIAPDVSKLGECEFALISEMNSQLIVHHPYRTLSELTPELQLTSDEV-ALAWSVIN 179
Query: 622 DTYKMDLILVHPPYRIALACIYIASVHR 705
D Y DL L++PP+ IA+ I +A V +
Sbjct: 180 DHYLTDLPLLYPPHVIAVMAIIVAVVFK 207
>sp|Q4WZT9|SSN8_ASPFU RNA polymerase II holoenzyme cyclin-like subunit
OS=Aspergillus fumigatus GN=ssn8 PE=3 SV=1
Length = 302
Score = 109 bits (272), Expect = 3e-023
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 8/208 (3%)
Frame = +1
Query: 103 MAANFWESSQCKR-LLEQEEVDVVHPLDKE------RGITVEDFKLIKFHMSNHITKLAQ 261
MAAN+W S+Q + L +E++ + + +E + D +L+ + S + KL +
Sbjct: 1 MAANYWASTQRRHWLFTREKLAEIREIFREGDKVAHSQFPLPDQRLLNIYFSQQLIKLGK 60
Query: 262 HIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKR 441
+ RQ+ +ATA Y++R YTK + +P LV T YLA K EE R +V +
Sbjct: 61 RMSTRQQALATAQVYIKRFYTKNEIRHTNPYLVLTTAFYLACKMEECPQHIRFVVGEARS 120
Query: 442 LYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVN 621
L+P+ ++ L E ++ +N L+V HPYR+LSE + +L + + W ++N
Sbjct: 121 LWPEFITPDVSKLGECEFSLISEMNSQLIVHHPYRTLSELQPELSLTSDEV-ALAWSVIN 179
Query: 622 DTYKMDLILVHPPYRIALACIYIASVHR 705
D Y DL L++ P+ IA+ I +A V +
Sbjct: 180 DHYLTDLPLLYAPHVIAVMAIIVAVVFK 207
>sp|Q62447|CCNC_MOUSE Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=3
Length = 283
Score = 109 bits (271), Expect = 4e-023
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 445 YPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVND 624
+P E+ Y + +L E +LE ++ L+V+HPYR L +++QD DV + + W IVND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDV-LLPLAWRIVND 182
Query: 625 TYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYR 804
TY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM + I IL YE ++
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWK 242
Query: 805 SITDEKVSSAFNKLTMKP 858
+ + K + KP
Sbjct: 243 NFDERKEMATILSKMPKP 260
>sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2
Length = 278
Score = 108 bits (269), Expect = 7e-023
Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Frame = +1
Query: 400 SIVQARNLVFYIKRLY--PDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDA 573
S++ A V + Y P E+ Y + +L E +LE ++ L+V+HPYR L +++QD
Sbjct: 102 SLIAATTSVLKTRFSYASPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM 161
Query: 574 ALNDVNMNQMTWGIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMN 753
DV + + W IVNDTY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM
Sbjct: 162 GQEDV-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDME 220
Query: 754 LVKNIAMEILDFYENYRSITDEKVSSAFNKLTMKP 858
+ I IL YE +++ + K + KP
Sbjct: 221 KILEIIRVILKLYEQWKNFDERKEMATILSKMPKP 255
>sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1
Length = 283
Score = 108 bits (269), Expect = 7e-023
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Frame = +1
Query: 445 YPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVND 624
+P E+ Y + +L E +LE ++ L+V+HPYR L +++QD D+ + + W IVND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 625 TYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYR 804
TY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM + I IL YE ++
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWK 242
Query: 805 SITDEKVSSAFNKLTMKP 858
+ + K ++ KP
Sbjct: 243 NFDERKEMASILSKMPKP 260
>sp|Q28F72|CCNC_XENTR Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1
Length = 283
Score = 108 bits (269), Expect = 7e-023
Identities = 50/135 (37%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +1
Query: 445 YPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVND 624
+P E+ Y + +L E +LE ++ L+V+HPYR L +++QD D+ + + W IVND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 625 TYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYR 804
TY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM + I IL YE ++
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWK 242
Query: 805 SITDEK-VSSAFNKL 846
+ + K +++ NK+
Sbjct: 243 NFDERKEMATILNKM 257
>sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1
Length = 283
Score = 108 bits (268), Expect = 9e-023
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Frame = +1
Query: 445 YPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVND 624
+P E+ Y++ +L E +LE ++ L+V+HPYR L +++QD D+ + + W IVND
Sbjct: 124 FPKEFPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 625 TYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYR 804
TY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM + I IL YE ++
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWK 242
Query: 805 SITDEKVSSAFNKLTMKP 858
+ + K + KP
Sbjct: 243 NFDERKEMATILSKMPKP 260
Score = 73 bits (177), Expect = 3e-012
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 103 MAANFWESSQCKRLLEQEEVDVVHPLDKE-RGITVEDFKLIKFHMSNHITKLAQHIKVRQ 279
MA NFW+SS + + ++ D++ K+ + ++ E++ ++ +N I L +H+K+RQ
Sbjct: 1 MAGNFWQSSHYLQWILDKQ-DLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQ 59
Query: 280 RVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEE-SIVQARNLVFYIKRLYPDE 456
+V+ATA Y +R Y + S+ DP L+A TC++LASK EE +V L+ +
Sbjct: 60 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTR 119
Query: 457 YKYELKDLLGMEMK-VLEALNYSL 525
+ Y +M VLE Y L
Sbjct: 120 FSYAFPKEFPYKMNHVLECEFYLL 143
>sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1
Length = 283
Score = 108 bits (268), Expect = 9e-023
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 445 YPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVND 624
+P E+ Y + +L E +LE ++ L+V+HPYR L +++QD D+ + + W IVND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 625 TYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYR 804
TY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM + I IL YE ++
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWK 242
Query: 805 SITDEKVSSAFNKLTMKP 858
+ + K + KP
Sbjct: 243 NFDERKEMATILSKMPKP 260
>sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2
Length = 283
Score = 108 bits (268), Expect = 9e-023
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 445 YPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVND 624
+P E+ Y + +L E +LE ++ L+V+HPYR L +++QD D+ + + W IVND
Sbjct: 124 FPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDM-LLPLAWRIVND 182
Query: 625 TYKMDLILVHPPYRIALACIYIASVHREKDITAWLQDLNEDMNLVKNIAMEILDFYENYR 804
TY+ DL L++PP+ IALAC+++A V ++KD W +L+ DM + I IL YE ++
Sbjct: 183 TYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWK 242
Query: 805 SITDEKVSSAFNKLTMKP 858
+ + K + KP
Sbjct: 243 NFDERKEMATILSKMPKP 260
>sp|A1C7R6|SSN8_ASPCL RNA polymerase II holoenzyme cyclin-like subunit
OS=Aspergillus clavatus GN=ssn8 PE=3 SV=2
Length = 302
Score = 107 bits (267), Expect = 1e-022
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 8/208 (3%)
Frame = +1
Query: 103 MAANFWESSQCKR-LLEQEEVDVVHPLDKER------GITVEDFKLIKFHMSNHITKLAQ 261
MAAN+W S+Q + L +E + + +ER + D +L+ + S + KL +
Sbjct: 1 MAANYWASTQRRHWLFTRERLAEIREAFRERHKLAHSQFPLPDQRLLNIYFSQQLIKLGK 60
Query: 262 HIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNLVFYIKR 441
+ RQ+ +ATA Y++R YTK + +P LV T YLA K EE R +V +
Sbjct: 61 RMSTRQQALATAQVYIKRFYTKNEIRHTNPYLVLTTAFYLACKMEECPQHIRFVVGEARS 120
Query: 442 LYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMNQMTWGIVN 621
L+P+ ++ L E ++ +N L+V HPYR+LS + +L + + W ++N
Sbjct: 121 LWPEFITPDVSKLGECEFSLISEMNSQLIVHHPYRTLSGLQSELSLTSDEV-ALAWSVIN 179
Query: 622 DTYKMDLILVHPPYRIALACIYIASVHR 705
D Y DL L++ P+ IA+ + +A V +
Sbjct: 180 DHYLTDLPLLYSPHVIAVMAVMVAVVFK 207
>sp|Q6BYF8|SSN8_DEBHA RNA polymerase II holoenzyme cyclin-like subunit
OS=Debaryomyces hansenii GN=SSN8 PE=3 SV=2
Length = 345
Score = 101 bits (249), Expect = 1e-020
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 23/221 (10%)
Frame = +1
Query: 103 MAANFWESSQCKR-------LLEQEEVDVVHPLDKERGITVEDFKLIKF------HMSNH 243
M+A+FW SSQ R LLE ++ + ++D+ +++ ++ N
Sbjct: 1 MSADFWSSSQRNRWQLTRHSLLESRRKLLLLEKKMIQNGFIKDYPNVEYDANTRIYLHNL 60
Query: 244 ITKLAQHIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNL 423
+ KL + + VRQ +ATA YM R K S+ E + L+ TCLY A K EE R +
Sbjct: 61 LIKLGRRLNVRQIALATAEIYMSRFLIKVSLKEINVYLLVTTCLYAACKIEECPQHIRLI 120
Query: 424 VFYIKRLYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEF---------LQDAA 576
+ L+P+ ++ L E ++E ++ LV+ HPYRSL + L +
Sbjct: 121 TSEARNLWPEYIPQDVTKLAEFEFYLIEEMDSFLVLHHPYRSLLQIRDYLNENFALYGFS 180
Query: 577 LNDVNMNQMTWGIVNDTYKMDLILVHPPYRIALACIYIASV 699
L+D + Q +W ++ND+Y DL L+ PP+ IA+A IYI V
Sbjct: 181 LSDDEL-QNSWSLINDSYITDLHLLLPPHIIAIATIYITIV 220
>sp|Q6CP20|SSN8_KLULA RNA polymerase II holoenzyme cyclin-like subunit
OS=Kluyveromyces lactis GN=SSN8 PE=3 SV=1
Length = 304
Score = 99 bits (245), Expect = 4e-020
Identities = 59/220 (26%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Frame = +1
Query: 244 ITKLAQHIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARNL 423
I KL + + +RQ + TA Y+ R + S+ E + L+ TC+YLA K EE R L
Sbjct: 80 IMKLGRRLNIRQCALVTAHVYLSRFLLRASVREVNLYLLITTCIYLACKVEECPQHIRTL 139
Query: 424 VFYIKRLYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSLSEFLQDAALNDVNMN-- 597
V + L+P+ ++ + E ++E L L+V HPYRSL + + AL+ N
Sbjct: 140 VNEARSLWPEFIPPDVTKVTEFEFYLIEELQSYLIVHHPYRSLEQI--EKALSSEKYNYK 197
Query: 598 ------QMTWGIVNDTYKMDLILVHPPYRIALACIYIAS--VHREKD------ITAWLQD 735
Q W ++ND+Y D+ L++ P+ IA++C++ S +H+ +D I ++ +
Sbjct: 198 LSDDELQKIWSLINDSYTTDVHLLYSPHVIAISCLFAVSCIIHKPEDSTKRANINMFIAE 257
Query: 736 LNEDMNLVKNIAMEILDFYENYRSITDEKVSSAFNKLTMK 855
++ V I E++ Y+++ + ++ + ++L ++
Sbjct: 258 TQVNLEQVMFILQELISLYDHWDKYNELRIRALLHELYLR 297
>sp|A3LPX1|SSN8_PICST RNA polymerase II holoenzyme cyclin-like subunit OS=Pichia
stipitis GN=SSN8 PE=3 SV=2
Length = 346
Score = 98 bits (242), Expect = 1e-019
Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 25/222 (11%)
Frame = +1
Query: 103 MAANFWESSQ--------------CKRLLEQEEVDVVHPLDKERGITVEDFKLIKFHMSN 240
M+A+FW SSQ +++L E + + L K+ DF + + ++ N
Sbjct: 1 MSADFWCSSQRNKWQLSRQSLLEARRKVLLLERKMIQNGLIKDYPNIHYDFNM-RIYLHN 59
Query: 241 HITKLAQHIKVRQRVVATAITYMRRVYTKKSMVEFDPRLVAITCLYLASKAEESIVQARN 420
+ KL + + +RQ +ATA Y+ R T+ S+ E + L+ TCLY+A K EE R
Sbjct: 60 LLIKLGRRLNIRQVALATAEIYLNRFLTRVSLKEINVYLLVTTCLYVACKIEECPQHIRL 119
Query: 421 LVFYIKRLYPDEYKYELKDLLGMEMKVLEALNYSLVVFHPYRSL---SEFLQDAA----- 576
++ + L+P+ +++ L E ++E ++ L + HPY+SL +FL + +
Sbjct: 120 IISEARNLWPEYIPHDVTKLAEFEFYLIEEMDSYLFLHHPYKSLIQIRDFLNENSAVFGF 179
Query: 577 -LNDVNMNQMTWGIVNDTYKMDLILVHPPYRIALACIYIASV 699
L D + Q W +VND+Y DL L+ PP+ IA+A IYI V
Sbjct: 180 TLTDDEL-QNAWSLVNDSYITDLHLLLPPHIIAVASIYITIV 220
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,926,430,684
Number of Sequences: 518415
Number of Extensions: 82926430684
Number of Successful Extensions: 560000484
Number of sequences better than 0.0: 0
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