BLASTX 7.6.2
Query= UN20278 /QuerySize=1088
(1087 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associa... 80 3e-014
sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizos... 75 6e-013
sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synapto... 71 1e-011
sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associa... 70 2e-011
sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associa... 70 2e-011
sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associate... 70 2e-011
sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associa... 70 3e-011
sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associa... 69 4e-011
sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associa... 68 9e-011
sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associate... 64 1e-009
sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associa... 64 2e-009
sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associa... 61 1e-008
sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associa... 61 1e-008
sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associate... 61 1e-008
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein
C16G5.05c OS=Schizosaccharomyces pombe GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 80 bits (195), Expect = 3e-014
Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Frame = -1
Query: 919 NKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEVLVTMQAQKEAPG-DMQCKDKFLLQ 743
N + V FKVKTT PK YCVRPN+G + P+S+ V V +QA KE P D +C+DKFL+Q
Sbjct: 27 NPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQ 86
Query: 742 CVVSTPGVTPKDVTPEMF---SKEAGHRVEETKLRVVYVDPPRPPSPVREEGSEEGSSPR 572
+ T F ++ G + + K+R VY P S ++ + S+P
Sbjct: 87 SMAIGDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYSTKQPPQSADKQVENTSTSNPP 146
Query: 571 ASV--SDNGASDFTAAPRFSVDRVEPQENSSEAR 476
SV S+N AS V E Q + + A+
Sbjct: 147 VSVEGSENLASSVGGPTAVGVSLDEAQNDFNGAK 180
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces
pombe GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 75 bits (184), Expect = 6e-013
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Frame = -1
Query: 967 FPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEVLVTMQA-- 794
FP L + + C L L N + FKVKTT PK+YCVRPN G + S+ V V +Q
Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLD 70
Query: 793 QKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHRVEETKLRVVYVDPPRPPS 614
+ APG +C+DKFL+Q P + D+ +++++ + + E K+R VY + P +
Sbjct: 71 HEPAPG-TKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVYSEGPSTAN 128
Query: 613 PVREEGSEEGSSPRASVSDNGASDFT 536
+ + S+ + ++T
Sbjct: 129 AHANAHHQPAQTTTTSIPTSATDNYT 154
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding
protein OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 71 bits (172), Expect = 1e-011
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Frame = -1
Query: 976 DLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEVLVTMQ 797
+L+F ++ L L+N TD + FKVKTT PK+YCVRPN+G++ P++S V V +Q
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 796 AQKEAPGDMQCKDKFLLQC------VVSTPGVTPKDVTPEMFSKEAGHRVEETKLRVVYV 635
P + K KF++Q VV + + KD PE + +TKLR V+
Sbjct: 75 PFNYDPNEKN-KHKFMVQSMYAPDHVVESQELLWKDAPPE--------SLMDTKLRCVFE 125
Query: 634 DPPRPPSPVREEGSEEGSSPRASVSDNGASDFTAAPR 524
P + S + A S++ D T A R
Sbjct: 126 MPDGSHQAPASDAS-RATDAGAHFSESALEDPTVASR 161
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A
OS=Homo sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 70 bits (170), Expect = 2e-011
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = -1
Query: 1027 TGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPN 848
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 847 TGVVLPRSSSEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHR 668
+G++ P S+ V V +Q P + + K KF++Q + + P + + ++ +
Sbjct: 65 SGIIDPGSTVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNTSDMEA---VWKEAKPDE 120
Query: 667 VEETKLRVVYVDP 629
+ ++KLR V+ P
Sbjct: 121 LMDSKLRCVFEMP 133
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A
OS=Pongo abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 70 bits (170), Expect = 2e-011
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = -1
Query: 1027 TGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPN 848
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 847 TGVVLPRSSSEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHR 668
+G++ P S+ V V +Q P + + K KF++Q + + P + + ++ +
Sbjct: 65 SGIIDPGSTVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNTSDMEA---VWKEAKPDE 120
Query: 667 VEETKLRVVYVDP 629
+ ++KLR V+ P
Sbjct: 121 LMDSKLRCVFEMP 133
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A
OS=Rattus norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 70 bits (170), Expect = 2e-011
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = -1
Query: 1027 TGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPN 848
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 847 TGVVLPRSSSEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHR 668
+GV+ P S V V +Q P + + K KF++Q + + P ++ + ++ +
Sbjct: 65 SGVIDPGSIVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDE 120
Query: 667 VEETKLRVVYVDP 629
+ ++KLR V+ P
Sbjct: 121 LMDSKLRCVFEMP 133
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A
OS=Mus musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 70 bits (169), Expect = 3e-011
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = -1
Query: 1027 TGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPN 848
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 847 TGVVLPRSSSEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHR 668
+G++ P S V V +Q P + + K KF++Q + + P ++ + ++ +
Sbjct: 65 SGIIDPGSIVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDE 120
Query: 667 VEETKLRVVYVDP 629
+ ++KLR V+ P
Sbjct: 121 LMDSKLRCVFEMP 133
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A
OS=Bos taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 69 bits (168), Expect = 4e-011
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
Frame = -1
Query: 1027 TGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPN 848
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGTMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 847 TGVVLPRSSSEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHR 668
+G++ P + V V +Q P + + K KF++Q + + P ++ + ++ +
Sbjct: 65 SGIIDPGLTVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDE 120
Query: 667 VEETKLRVVYVDP 629
+ ++KLR V+ P
Sbjct: 121 LMDSKLRCVFEMP 133
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein
SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3
Length = 244
Score = 68 bits (165), Expect = 9e-011
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Frame = -1
Query: 994 LDIDPIDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSSSE 815
++I P L + L +Q + ++N +D +AFKVKTT PK YCVRPN VV P + +
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 814 VLVTMQAQKEAP-GDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHRVE--ETKLRV 644
V V E P D +C+DKFL+ + S + K V EA + + K++V
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKV 123
Query: 643 VYVDPPRPPSPVREEGSEEGSSPRASVSDNGASDFTAAPRFSVDRVEPQ 497
Y+ P + E + V D+ + A EP+
Sbjct: 124 KYLISPDVHPAQNQNIQENKETVEPVVQDSEPKEVPAVVNEKEVPAEPE 172
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B
OS=Rattus norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 64 bits (155), Expect = 1e-009
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = -1
Query: 997 LLDIDP-IDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSS 821
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+GV+ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGAS 66
Query: 820 SEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHRVEETKLRVV 641
V V +Q P + + K KF++Q + + P + + ++ + + ++KLR V
Sbjct: 67 LNVSVMLQPFDYDPNE-KSKHKFMVQSMFAPPDTSDMEA---VWKEAKPEDLMDSKLRCV 122
Query: 640 YVDPPRPPSP 611
+ P P
Sbjct: 123 FELPAENAKP 132
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B
OS=Mus musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 64 bits (154), Expect = 2e-009
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = -1
Query: 997 LLDIDP-IDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSS 821
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+GV+ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGAS 66
Query: 820 SEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTPEMFSKEAGHRVEETKLRVV 641
V V +Q P + + K KF++Q + + P + + ++ + + ++KLR V
Sbjct: 67 LNVSVMLQPFDYDPNE-KSKHKFMVQSMFAPPDTSDMEA---VWKEAKPEDLMDSKLRCV 122
Query: 640 YVDPPRPPSP 611
+ P P
Sbjct: 123 FELPAENAKP 132
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B
OS=Bos taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 61 bits (147), Expect = 1e-008
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = -1
Query: 997 LLDIDP-IDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSS 821
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 820 SEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTP-EMFSKEA-GHRVEETKLR 647
V V +Q P + + K KF++Q + + P D + E KEA + ++KLR
Sbjct: 67 INVSVMLQPFDYDPNE-KSKHKFMVQSMFA-----PTDTSDMEAVWKEAKPEDLMDSKLR 120
Query: 646 VVYVDPPRPPSP 611
V+ P P
Sbjct: 121 CVFELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C
OS=Homo sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 61 bits (147), Expect = 1e-008
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = -1
Query: 997 LLDIDP-IDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSS 821
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 820 SEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTP-EMFSKEA-GHRVEETKLR 647
V V +Q P + + K KF++Q + + P D + E KEA + ++KLR
Sbjct: 67 INVSVMLQPFDYDPNE-KSKHKFMVQSMFA-----PTDTSDMEAVWKEAKPEDLMDSKLR 120
Query: 646 VVYVDPPRPPSP 611
V+ P P
Sbjct: 121 CVFELPAENDKP 132
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B
OS=Sus scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 61 bits (146), Expect = 1e-008
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = -1
Query: 997 LLDIDP-IDLQFPFELKKQISCSLYLANKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRSS 821
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 820 SEVLVTMQAQKEAPGDMQCKDKFLLQCVVSTPGVTPKDVTP-EMFSKEA-GHRVEETKLR 647
V V +Q P + + K KF++Q + + P D + E KEA + ++KLR
Sbjct: 67 INVSVMLQPFDYDPNE-KSKHKFMVQSMFA-----PADTSDMEAAWKEAKPEDLMDSKLR 120
Query: 646 VVYVDPPRPPSP 611
V+ P P
Sbjct: 121 CVFELPAENDKP 132
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,926,430,684
Number of Sequences: 518415
Number of Extensions: 82926430684
Number of Successful Extensions: 560000484
Number of sequences better than 0.0: 0
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