BLASTX 7.6.2
Query= UN20285 /QuerySize=1080
(1079 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 322 3e-088
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 258 4e-069
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 101 1e-021
TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 76 3e-014
TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY... 74 2e-013
TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |... 64 1e-010
TAIR9_protein||AT1G72740.2 | Symbols: | DNA-binding family prot... 61 1e-009
TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility... 60 3e-009
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 58 8e-009
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 58 8e-009
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 58 8e-009
TAIR9_protein||AT4G31880.1 | Symbols: | LOCATED IN: cytosol, ch... 48 8e-006
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 322 bits (824), Expect = 3e-088
Identities = 203/283 (71%), Positives = 215/283 (75%), Gaps = 26/283 (9%)
Frame = +3
Query: 57 MSTEEE--PKVVESGDAEADATVTTTTEKKPA----KAKAKKTKEAKKKPAAAAAP-RKR 215
MS EEE P V+SG A+ T + EKKPA K+K T +A KKP AAAP +K+
Sbjct: 1 MSIEEENVPTTVDSGAAD---TTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKK 57
Query: 216 TTSSHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASG 395
TTSSHP YEEMIKDAIVTLKERTGSSQYAIQKFIEEK KSLPPTFRKLLLVNL+RLVAS
Sbjct: 58 TTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASE 117
Query: 396 KLVKVKASFKIPSASAA---KPAAVKKKPAATVTKPKGKAAAAPA-KKAKPAAKGTKKPA 563
KLVKVKASFKIPSA +A KPAA KK A V KPKGK AAA A KAK AAKGTKKPA
Sbjct: 118 KLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPA 177
Query: 564 ASAAKPKAKTTTTKAAAKPKVT-AKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRT 740
A KAK T A K KVT AKPK+KSVAAVSKTKAVAAKPKAKERPAKASRTS+RT
Sbjct: 178 AKVV-AKAKVT---AKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRT 233
Query: 741 SPGKKAAPAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRASTR 869
SPG KK AAP AKK A +KK PAKS KVKSPAKRASTR
Sbjct: 234 SPG------KKVAAP-AKKVAVTKKAPAKSVKVKSPAKRASTR 269
Score = 321 bits (822), Expect = 5e-088
Identities = 200/279 (71%), Positives = 212/279 (75%), Gaps = 24/279 (8%)
Frame = +3
Query: 66 EEEPKVVESGDAEADATVTTTTEKKPA----KAKAKKTKEAKKKPAAAAAP-RKRTTSSH 230
E P V+SG A+ T + EKKPA K+K T +A KKP AAAP +K+TTSSH
Sbjct: 6 ENVPTTVDSGAAD---TTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSH 62
Query: 231 PPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASGKLVKV 410
P YEEMIKDAIVTLKERTGSSQYAIQKFIEEK KSLPPTFRKLLLVNL+RLVAS KLVKV
Sbjct: 63 PTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKV 122
Query: 411 KASFKIPSASAA---KPAAVKKKPAATVTKPKGKAAAAPA-KKAKPAAKGTKKPAASAAK 578
KASFKIPSA +A KPAA KK A V KPKGK AAA A KAK AAKGTKKPAA
Sbjct: 123 KASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVV- 181
Query: 579 PKAKTTTTKAAAKPKVT-AKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKK 755
KAK T A K KVT AKPK+KSVAAVSKTKAVAAKPKAKERPAKASRTS+RTSPG
Sbjct: 182 AKAKVT---AKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPG-- 236
Query: 756 AAPAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRASTRK 872
KK AAP AKK A +KK PAKS KVKSPAKRASTRK
Sbjct: 237 ----KKVAAP-AKKVAVTKKAPAKSVKVKSPAKRASTRK 270
Score = 78 bits (191), Expect = 8e-015
Identities = 78/244 (31%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Frame = +3
Query: 168 KEAKKKPAAAAAPRKRTTSSHPPYEEMIKDAIVTLKERTGSSQYAIQKFI-------EEK 326
K +KKPAA K+TT++ ++ +K A T K++T SS ++ I +E+
Sbjct: 22 KSPEKKPAAKGGKSKKTTTAKAT-KKPVKAAAPT-KKKTTSSHPTYEEMIKDAIVTLKER 79
Query: 327 QKSLPPTFRKLLLVNLRRLVAS-GKLVKVKASFKIPSASAAKPAAVKKKPAATVTKPKGK 503
S +K + + L + KL+ V + S K A K P+A +
Sbjct: 80 TGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSA-------R 132
Query: 504 AAAAPAKKAKPAAKGTKKPAASAAKPKAKTTTTKAAAKPKVTAKPKTKSVAAVSKTKAVA 683
+AA P KPAA KK A AKPK K A AK K AK K A V V
Sbjct: 133 SAATP----KPAAP-VKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVAKAKVT 187
Query: 684 AKPKAKERPAKASRTSSRTSPGKKAAPAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRAS 863
AKPKAK AK S KA AK A KA+ + + KV +PAK+ +
Sbjct: 188 AKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAAPAKKVA 247
Query: 864 TRKK 875
KK
Sbjct: 248 VTKK 251
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 258 bits (659), Expect = 4e-069
Identities = 169/284 (59%), Positives = 184/284 (64%), Gaps = 29/284 (10%)
Frame = +3
Query: 66 EEEPKVVESGDAEADATVT-TTTEKKPAK--AKAKKTKEAKKKPAAAAAPRKRTTSSHPP 236
E E G+ ADA VT EKKPA K K KE K+K AAAP+KRT SSHP
Sbjct: 5 EIENAATIEGNTAADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPT 64
Query: 237 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASGKLVKVKA 416
YEEMIKDAIVTLKERTGSSQYAIQKFIEEK+K LPPTFRKLLL+NL+RLVASGKLVKVKA
Sbjct: 65 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKA 124
Query: 417 SFKIPSAS---------AAKPAAVKKKPA-ATVTKPKGKAAAAPAKKAKPAAKGTKKPAA 566
SFK+PSAS A K A KKKPA VTK K K AAA K A KP
Sbjct: 125 SFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAV----KPKT 180
Query: 567 SAAKPKAKTTTTKAAAKPKVTAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSP 746
+AAK K AK K AKP ++ AA +K KAV AKPKAK RPAKA++T+ TSP
Sbjct: 181 AAAK--------KVTAKAK--AKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSP 230
Query: 747 GKKA-APAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRASTRKK 875
KKA A KK A A KK KKV K VKSPAKRAS+R K
Sbjct: 231 AKKAVAATKKVATVATKKKTPVKKV-VKPKTVKSPAKRASSRVK 273
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 101 bits (249), Expect = 1e-021
Identities = 64/161 (39%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = +3
Query: 180 KKPAAAAAPRKRTTSSHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKS-LPPTFRK 356
KK AA PRK T++HPPY +MIK+A++ LKE+ GSS YAI K IEEK KS LP +FRK
Sbjct: 8 KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67
Query: 357 LLLVNLRRLVASGKLVKVKASFKIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKKAKP 536
L + L+ VA GKLVK++AS+K+ + KK + K + K + +
Sbjct: 68 TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNM-KQEDKEITKRTRSSST 126
Query: 537 AAKGTKKPAASAAKPKAKTTTTKAAAKPKVTAKPKTKSVAA 659
K T K K K + K V K K+ AA
Sbjct: 127 RPKKTVSVNKQEKKRKVKKARQPKSIKSSVGKKKAMKASAA 167
>TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846254-7846670 FORWARD
Length = 139
Score = 76 bits (186), Expect = 3e-014
Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +3
Query: 246 MIKDAIVTLKERTGSSQYAIQKFIEEKQKS-LPPTFRKLLLVNLRRLVASGKLVKVKASF 422
MIK+A++ LKE+ GSS YAI K IEEK KS LP +FRK L + L+ VA GKLVK++AS+
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 423 KIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKKAKPAAKGTKKPAASAAKPKAKTTTT 602
K+ + KK + K + K + + K T K K K
Sbjct: 61 KLSDTTKMITRQQDKKNKKNM-KQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQ 119
Query: 603 KAAAKPKVTAKPKTKSVAA 659
+ K V K K+ AA
Sbjct: 120 PKSIKSSVGKKKAMKASAA 138
>TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY GROUP A); DNA
binding | chr1:5138665-5139353 REVERSE
Length = 205
Score = 74 bits (179), Expect = 2e-013
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Frame = +3
Query: 225 SHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASGKLV 404
S PPY +MI +AI +L ++ G ++ I K IE Q++LPP+ LL +L ++ +G+L+
Sbjct: 22 SLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQLI 81
Query: 405 KVKASFKIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKKA------KPAAKG-TKKPA 563
VK ++ P A P + +P T+ + AAAA A P ++G KP
Sbjct: 82 MVKNNYMKPDPD-APPKRGRGRPPKQKTQAESDAAAAAVVAATVVSTDPPRSRGRPPKPK 140
Query: 564 ASAAKPKAKTTTTKAAAKPKVTAKPKTKS--VAAVSKTKAVAAKPKAKERPAKASRT 728
+ P+ K T + + +P+T S VAA + + + RP K T
Sbjct: 141 DPSEPPQEKVITGSGRPRGRPPKRPRTDSETVAAPEPAAQATGERRGRGRPPKVKPT 197
>TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |
chr3:6169384-6171558 REVERSE
Length = 481
Score = 64 bits (154), Expect = 1e-010
Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 22/226 (9%)
Frame = +3
Query: 228 HPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASGKLVK 407
HPPY EMI AI L E GSS+ AI ++IE L LL +L+ L SG L
Sbjct: 65 HPPYSEMICAAIAALNEPDGSSKMAISRYIERCYTGLTSAHAALLTHHLKTLKTSGVLSM 124
Query: 408 VKASFKIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKKAKPAAKGTKKPAASAAKPKA 587
VK S+KI + S+ PA+V AA + P + ++ + SA++P
Sbjct: 125 VKKSYKI-AGSSTPPASVAVAAAAA-----AQGLDVPRSEILHSSNNDPMASGSASQPLK 178
Query: 588 KTTTTKAAAKPK-----VTAKPKTKSVAA-----VSKTKAVAAKPKAKERPAKASRTSSR 737
+ KP+ + P T V A + + + P A R R
Sbjct: 179 RGRGRPPKPKPESQPQPLQQLPPTNQVQANGQPIWEQQQVQSPVPVPTPVTESAKRGPGR 238
Query: 738 TSPGKKAAPAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRASTRKK 875
AAPA A+ A K+ + + P +RA+ R++
Sbjct: 239 PRKNGSAAPATAPIVQASVMAGIMKR------RGRPPGRRAAGRQR 278
>TAIR9_protein||AT1G72740.2 | Symbols: | DNA-binding family protein / histone
H1/H5 family protein | chr1:27380499-27382687 REVERSE
Length = 282
Score = 61 bits (147), Expect = 1e-009
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Frame = +3
Query: 78 KVVESGDAEADATVTTTTEKKPAKAKAKKTKEAKKKPAAAAAPRK----RTTSSHPPYEE 245
KV E GD A T +P P P + T + P Y+
Sbjct: 73 KVKEEGDTPAADANDAVTIPRPIPT-------IPPPPGRRTLPSELIPDENTKNAPRYDG 125
Query: 246 MIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASGKLVKVKASFK 425
+I +A+ L + GS +I FIE + + +PP FR++L LRRL A KL K++ +K
Sbjct: 126 VIFEALSALADGNGSDVSSIYHFIEPRHE-VPPNFRRILSTRLRRLAAQSKLEKIQNFYK 184
Query: 426 IPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKKAKPAAKGTKKPAASAAKPKAKTTTTK 605
IP S K K K T + +A +++ A T A + + K K
Sbjct: 185 IPDPSGTKIGVPKPKETHTKLRQANNQTSADSQQMIEEAAIT--AACKVVEAENKIDVAK 242
Query: 606 AAAK 617
AA+
Sbjct: 243 LAAE 246
>TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility Group Family A
5); DNA binding | chr1:17974148-17976301 REVERSE
Length = 480
Score = 60 bits (143), Expect = 3e-009
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +3
Query: 225 SHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRRLVASGKLV 404
SHPPY +MI AI L E GSS+ AI ++IE +P LL +L+ L SG LV
Sbjct: 74 SHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILV 133
Query: 405 KVKASFKIPSASAAKP 452
VK S+K+ S P
Sbjct: 134 MVKKSYKLASTPPPPP 149
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 58 bits (139), Expect = 8e-009
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Frame = +3
Query: 222 SSHPP-------YEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRR 380
SS+PP + +I +AI TLKE G ++ I +IE+ Q PP F++LL L+
Sbjct: 109 SSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKY 167
Query: 381 LVASGKLVKVKASFKIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKK 527
L + GKLVKVK ++IP+++ P + ++ V K + ++ P+ K
Sbjct: 168 LTSCGKLVKVKRKYRIPNST---PLSSHRRKGLGVFGGKQRTSSLPSPK 213
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 58 bits (139), Expect = 8e-009
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Frame = +3
Query: 222 SSHPP-------YEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRR 380
SS+PP + +I +AI TLKE G ++ I +IE+ Q PP F++LL L+
Sbjct: 109 SSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKY 167
Query: 381 LVASGKLVKVKASFKIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKK 527
L + GKLVKVK ++IP+++ P + ++ V K + ++ P+ K
Sbjct: 168 LTSCGKLVKVKRKYRIPNST---PLSSHRRKGLGVFGGKQRTSSLPSPK 213
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 58 bits (139), Expect = 8e-009
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Frame = +3
Query: 222 SSHPP-------YEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLRR 380
SS+PP + +I +AI TLKE G ++ I +IE+ Q PP F++LL L+
Sbjct: 109 SSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIED-QYHAPPDFKRLLSTKLKY 167
Query: 381 LVASGKLVKVKASFKIPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKK 527
L + GKLVKVK ++IP+++ P + ++ V K + ++ P+ K
Sbjct: 168 LTSCGKLVKVKRKYRIPNST---PLSSHRRKGLGVFGGKQRTSSLPSPK 213
>TAIR9_protein||AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G15940.1);
Has 114836 Blast hits to 56273 proteins in 1914 species: Archae - 187;
Bacteria - 15478; Metazoa - 53116; Fungi - 16017; Plants - 4342;
Viruses - 719; Other Eukaryotes - 24977 (source: NCBI BLink). |
chr4:15419435-15423939 REVERSE
Length = 874
Score = 48 bits (113), Expect = 8e-006
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Frame = +3
Query: 426 IPSASAAKPAAVKKKPAATVTKPKGKAAAAPAKKAKPAAKGTKKPAASAAKPKAKTTTTK 605
+P AK K+ + KG A + KA PA+K +K + K +K+ +K
Sbjct: 684 VPLTKKAKTG--KQSKMDNSSAKKGSGAGSSKAKATPASKSSK--TSQDDKTASKSKDSK 739
Query: 606 AAAKPKVTAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKAAPAKKAAAP 785
A++ + + + KT + ++K+ + S++ + KK KA
Sbjct: 740 EASREEEASSEEESEEEEPPKTVGKSGSSRSKKDISSVSKSGKSKASSKKKEEPSKATTS 799
Query: 786 AAKKAAASKKVPAKSAKVKSPAKRAS 863
+ K+ K VPAKS K AK S
Sbjct: 800 SKSKSGPVKSVPAKSKTGKGKAKSGS 825
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,595,443,243
Number of Sequences: 33410
Number of Extensions: 10595443243
Number of Successful Extensions: 359217299
Number of sequences better than 0.0: 0
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