BLASTX 7.6.2
Query= UN20289 /QuerySize=1079
(1078 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 136 3e-031
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 122 7e-027
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 114 2e-024
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 106 3e-022
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 106 5e-022
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 87 2e-016
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 74 1e-012
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 70 3e-011
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 69 5e-011
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 67 2e-010
sp|P42696|RBM34_HUMAN RNA-binding protein 34 OS=Homo sapiens GN=... 63 4e-009
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 62 5e-009
sp|Q8C5L7|RBM34_MOUSE RNA-binding protein 34 OS=Mus musculus GN=... 59 4e-008
sp|Q5M9F1|RBM34_RAT RNA-binding protein 34 OS=Rattus norvegicus ... 59 5e-008
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 57 2e-007
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 324
Score = 136 bits (342), Expect = 3e-031
Identities = 87/253 (34%), Positives = 142/253 (56%), Gaps = 6/253 (2%)
Frame = -3
Query: 929 FHLSSLSRQRLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEETEAEPVVTKKPRP 750
F +SSL R + L +S S+ ++ ++ EEE + A+ E E + E V ++
Sbjct: 56 FPISSLYRSSIFLSTCASVSD--GVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEG 113
Query: 749 CELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIA 570
LYV N+P S +QL ++F GTV +VE+ + T SRG +VTM S+ AK AI
Sbjct: 114 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIR 173
Query: 569 SLDGNEVGGREMRVRYSVDMNPGTRKNTSA-LNSTPKKILMYESPYKVYVGNLPWLTQPD 393
DG++VGGR ++V + G R+ SA + ST + + +SP+K+YV NL W
Sbjct: 174 LFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFV--DSPHKLYVANLSWALTSQ 231
Query: 392 GLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAAL-SLNGTEYEGRRIIVR 216
GLRD F+ +S +V++DR +G++R F F++F++ + ++AL ++N E EGR + +
Sbjct: 232 GLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLN 291
Query: 215 QGIERTES*KPPV 177
++ PPV
Sbjct: 292 VAGQKAPVSSPPV 304
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 122 bits (304), Expect = 7e-027
Identities = 86/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Frame = -3
Query: 1007 SNAIPKCKTLTSSCFYVASLKASTTSFHLSSLSRQRLQLKV---FSSSSELSVLDEATQE 837
SN + K L SC Y + + +S+L + L + S +L + + +E
Sbjct: 42 SNTLKPIKLLHLSCTYSPCILSPKKKTSVSALQEEENTLILDGQGQESGDLFNFEPSGEE 101
Query: 836 AEEEEEVKADRETGEETEA-----EPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGT 672
EEE V+A + GE E E + P +L+V N+P D L +F+ G
Sbjct: 102 TEEEGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGV 161
Query: 671 VISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRK 492
V EV N +T +SRG G+VTMS++ A+ A+ + +V GR + V N R+
Sbjct: 162 VEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTV------NKAARR 215
Query: 491 NTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNR 312
+ +E Y++YVGN+PW L FS+ G VVS RV++DR+TG++R
Sbjct: 216 G----ERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSR 271
Query: 311 VFAFLSFANLDE-RDAALSLNGTEYEGRRIIV 219
F F++ A+ E DA +L+G +GR I V
Sbjct: 272 GFGFVTMASEAEMSDAIANLDGQSLDGRTIRV 303
Score = 69 bits (168), Expect = 4e-011
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = -3
Query: 539 EMRVRYSVDMNPGTRKNTSALNSTPKK-ILMYESPYKVYVGNLPWLTQPDGLRDHFSQFG 363
EM RY V+ T + P++ +E Y++YVGN+PW L FS+ G
Sbjct: 195 EMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHG 254
Query: 362 TVVSTRVLHDRKTGKNRVFAFLSFANLDE-RDAALSLNGTEYEGRRIIVRQGIERT 198
VVS RV++DR+TG++R F F++ A+ E DA +L+G +GR I V +R+
Sbjct: 255 KVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRS 310
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 114 bits (283), Expect = 2e-024
Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
Frame = -3
Query: 983 TLTSSCFYVASLKASTTSFHLSSLSRQRLQLKVFSSSSELS---VLDEATQEAEEEEEVK 813
+LT + + TTS SL L L + SSSS S V + ++ E+V+
Sbjct: 12 SLTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVE 71
Query: 812 -ADRETGEETEAEPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPET 636
D EE P +++V N+P S D L ++F+ G V VEV + T
Sbjct: 72 DGDDGVEEERNFSP-------DLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLT 124
Query: 635 GESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNTSALNSTPKKI 456
G SRG G+VTMSS + A +G E+ GR +RV P ++ S+ +
Sbjct: 125 GRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSG---PPPEKRENSSFRGGSRGG 181
Query: 455 LMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE 276
++S +VYVGNL W D L FS+ G VV +V++DR +G++R F F+++++ +E
Sbjct: 182 GSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 241
Query: 275 RDAAL-SLNGTEYEGRRIIV 219
+ A+ SL+G + GR I V
Sbjct: 242 VNNAIESLDGVDLNGRAIRV 261
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 106 bits (264), Expect = 3e-022
Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 19/265 (7%)
Frame = -3
Query: 983 TLTSSCFYVASLKASTTSFHLSSLSRQRLQLKVFSSSSELS---VLDEATQEAEEEEEVK 813
+LT + + TTS SL L L + S SS S V + ++ E+V+
Sbjct: 12 SLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFSSRFVRKVTLPDFDQIEDVE 71
Query: 812 -ADRETGEETEAEPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPET 636
D EE P +++V N+ S D L ++F+ G V VEV + T
Sbjct: 72 DGDEGVEEERNFSP-------DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLT 124
Query: 635 GESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNT-----SALNS 471
G SRG G+VTMSS + A +G E+ GR +RV P R+N+ S+
Sbjct: 125 GRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPP--PEKRENSSFRENSSFRG 182
Query: 470 TPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSF 291
+ ++S +VYVGNL W D L FS+ G VV +V++DR +G++R F F+++
Sbjct: 183 GSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTY 242
Query: 290 ANLDERDAAL-SLNGTEYEGRRIIV 219
++ +E + A+ SL+G + GR I V
Sbjct: 243 SSAEEVNNAIESLDGVDLNGRAIRV 267
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 106 bits (262), Expect = 5e-022
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 26/266 (9%)
Frame = -3
Query: 953 SLKASTTSFHLSSLSRQ-RLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEETEAE 777
SL + + SF L+S S + K S +S + T E E EE+ AD A
Sbjct: 29 SLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFAD-------VAP 81
Query: 776 PVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSS 597
P +L+V N+P + D QL +F+S G V VEV + TG SRG G+VTMSS
Sbjct: 82 PKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSS 141
Query: 596 INSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNTSALNSTPKKILMYE--------- 444
++ + A +G E+ GR +R V+ P K + P+
Sbjct: 142 VSEVEAAAQQFNGYELDGRPLR----VNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGG 197
Query: 443 ----SPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE 276
S +VYVGNL W L FS+ G VV RV++DR +G+++ F F+++ + E
Sbjct: 198 SGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQE 257
Query: 275 -RDAALSLNGTEYEGRRIIVRQGIER 201
++A SL+G + +GR+I V + R
Sbjct: 258 VQNAIKSLDGADLDGRQIRVSEAEAR 283
>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1
Length = 414
Score = 87 bits (214), Expect = 2e-016
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 11/283 (3%)
Frame = -3
Query: 1058 AASSSCFAIPLSSSRSSSNAIPKCKTLTSSCFYVASLKASTTSFHLSSLSRQRLQLKVFS 879
++SS + SSS S S A K + S + + +++ + S
Sbjct: 59 SSSSDSESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSS 118
Query: 878 SSSELSVLDEATQEAEEEEEVKADRETGEETEAEPVVTKKPR------PCELYVCNIPRS 717
S S S ++ E EE + K E EE E E KK + P ++V + S
Sbjct: 119 SDSSSSSSSDSESEKEESNDKKRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWS 178
Query: 716 YDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGRE 537
D L F+ G VI V T SRG GYV + + A+ AI + G E+ GR
Sbjct: 179 IDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRP 238
Query: 536 MRVRYSVDMNPGTRKNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTV 357
+ S G TP E +++GNL + D + + F++ G V
Sbjct: 239 INCDMSTSKPAGNNDRAKKFGDTPS-----EPSDTLFLGNLSFNADRDAIFELFAKHGEV 293
Query: 356 VSTRVLHDRKTGKNRVFAFLSFANLDERDAALSLNGTEYEGRR 228
VS R+ +T + + F ++ F+N+++ AL EY R
Sbjct: 294 VSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNR 336
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 74 bits (181), Expect = 1e-012
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = -3
Query: 527 RYSVDMNPGTRKNTSALNSTPKKI-LMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVS 351
RY ++ T + S P++ +YE ++VYVGNLPW L FS+ G VV
Sbjct: 213 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 272
Query: 350 TRVLHDRKTGKNRVFAFLSFANLDERDAALS-LNGTEYEGRRIIVRQGIER 201
RV++DR+TG++R F F++ +++DE + A+S L+G EGR I V ER
Sbjct: 273 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323
Score = 62 bits (149), Expect = 6e-009
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = -3
Query: 743 LYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASL 564
+YV N+P D +L +F G V+ V + ETG SRG G+VTMS ++ AI++L
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 563 DGNEVGGREMRVRYSVDMNP 504
DG + GR +RV + + P
Sbjct: 306 DGQNLEGRAIRVNVAEERPP 325
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 70 bits (169), Expect = 3e-011
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -3
Query: 452 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFAN-LDE 276
M E Y+ +VG L W T + L FSQFG + +++++DR+TG++R F F++F +
Sbjct: 1 MAEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSM 60
Query: 275 RDAALSLNGTEYEGRRIIVRQGIER 201
RDA +NG E +GR I V + R
Sbjct: 61 RDAIEGMNGQELDGRNITVNEAQSR 85
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 69 bits (167), Expect = 5e-011
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 749 CELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIA 570
C +YV N+P D ++L +F G V+S V + ETG SRG G+VTMSS + +AIA
Sbjct: 149 CRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIA 208
Query: 569 SLDGNEVGGREMRV 528
+LDG + GR +RV
Sbjct: 209 ALDGQTLDGRAVRV 222
Score = 65 bits (158), Expect = 6e-010
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = -3
Query: 449 YESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE-R 273
+E +VYVGNLPW L FS+ G VVS RV+ DR+TG++R F F++ ++ E
Sbjct: 145 FEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVN 204
Query: 272 DAALSLNGTEYEGRRIIVRQGIER 201
DA +L+G +GR + V ER
Sbjct: 205 DAIAALDGQTLDGRAVRVNVAEER 228
Score = 60 bits (145), Expect = 2e-008
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = -3
Query: 767 TKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINS 588
++ P +L+V N+P D +L +F + G V EV N ET SRG G+VTMS++
Sbjct: 49 SEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEE 108
Query: 587 AKNAIASLDGNEVGGREMRV 528
A+ A+ L+G ++ GR++ V
Sbjct: 109 AEKAVELLNGYDMDGRQLTV 128
>sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana
GN=GRP8 PE=1 SV=1
Length = 169
Score = 67 bits (163), Expect = 2e-010
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = -3
Query: 452 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE- 276
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F DE
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFK--DEK 58
Query: 275 --RDAALSLNGTEYEGRRIIVRQGIER 201
RDA +NG E +GR I V + R
Sbjct: 59 AMRDAIEEMNGKELDGRVITVNEAQSR 85
>sp|P42696|RBM34_HUMAN RNA-binding protein 34 OS=Homo sapiens GN=RBM34 PE=1
SV=2
Length = 430
Score = 63 bits (151), Expect = 4e-009
Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 12/276 (4%)
Frame = -3
Query: 1019 SRSSSNAIPKCKTLTSSCFYVASLKASTTSFHLSSLSRQRLQLKVFSSSSELSVLDEATQ 840
S+ + + K T++ +A +++ S L Q+ K +S + V D
Sbjct: 99 SQEPAKKVKAKKKHTNAEKKLADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKIL 158
Query: 839 EAEEEEEVKADRETGEETEAEPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISV 660
+ E+ V ++ E E + ++ ++V N+P + + +L F+ +G + SV
Sbjct: 159 DDTEDTVVSQRKKIQINQEEERLKNER----TVFVGNLPVTCNKKKLKSFFKEYGQIESV 214
Query: 659 EV-SRNPETGE-SRGSGYVTMSSINSAKNAIASLDGNEVGGREMRV-RYSVDMNPGTRKN 489
S P G S+ + KN A + E + R + G R
Sbjct: 215 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 274
Query: 488 TSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRV 309
+ T + V+VGNLP+ + + HF G++++ R++ D+ TG +
Sbjct: 275 VDLASETSSR-----DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKG 329
Query: 308 FAFLSFANLDERDAALSLNGTEYEGRRIIVRQGIER 201
F ++ F N D AL LN +E GR++ V + + +
Sbjct: 330 FGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNK 365
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 62 bits (150), Expect = 5e-009
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = -3
Query: 449 YESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERD 270
++ Y++YVGN+PW L FS+ G VVS RV+ DR++G++R F F++ ++ E
Sbjct: 187 FQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMS 246
Query: 269 AAL-SLNGTEYEGRRIIVRQGIER 201
A+ +L+G +GR I V ER
Sbjct: 247 EAIANLDGQTLDGRTIRVNAAEER 270
Score = 61 bits (146), Expect = 1e-008
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -3
Query: 743 LYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASL 564
+YV NIP D +L +F G V+S V + E+G SRG G+VTMSS AIA+L
Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252
Query: 563 DGNEVGGREMRV 528
DG + GR +RV
Sbjct: 253 DGQTLDGRTIRV 264
>sp|Q8C5L7|RBM34_MOUSE RNA-binding protein 34 OS=Mus musculus GN=Rbm34 PE=1
SV=1
Length = 375
Score = 59 bits (142), Expect = 4e-008
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = -3
Query: 431 VYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAALSLN 252
V+VGNLP+ + L +HF G++V+ R++ + TG R F ++ F N D AL LN
Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 352
Query: 251 GTEYEGRRIIVRQGIER 201
+E GR++ V + + +
Sbjct: 353 NSELMGRKLRVMRSVNK 369
>sp|Q5M9F1|RBM34_RAT RNA-binding protein 34 OS=Rattus norvegicus GN=Rbm34 PE=2
SV=1
Length = 428
Score = 59 bits (141), Expect = 5e-008
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = -3
Query: 431 VYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAALSLN 252
V+VGNLP+ L +HF G++V+ R++ + TG R F ++ F N D AL LN
Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 346
Query: 251 GTEYEGRRIIVRQGIER 201
+E GR++ V + + +
Sbjct: 347 NSELMGRKLRVMRSVNK 363
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 57 bits (137), Expect = 2e-007
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Frame = -3
Query: 1028 LSSSRSSSNA-----IPKCKTLTSSCFYV-ASLKASTTSFHLSSLSRQRLQLKVFSSSSE 867
+S+S SS +A +P C + +S + SL S HL S+ LK SS +E
Sbjct: 1 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASS-ALKC-SSPAE 58
Query: 866 LSVLDEATQEAEEEEEVKADRETGEETEAEPVVTKKPRP-CELYVCNIPRSYDITQLLDM 690
+ EV+ D + ++ PV P +L+V N+ + D QL +
Sbjct: 59 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQL 118
Query: 689 FQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRV 528
F+S G V VEV + TG SRG G+VTMS+ + A +G E GR +RV
Sbjct: 119 FESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRV 172
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,926,430,684
Number of Sequences: 518415
Number of Extensions: 82926430684
Number of Successful Extensions: 560000484
Number of sequences better than 0.0: 0
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