BLASTX 7.6.2
Query= UN20289 /QuerySize=1079
(1078 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotei... 409 2e-114
TAIR9_protein||AT1G01080.2 | Symbols: | 33 kDa ribonucleoprotei... 404 5e-113
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 121 8e-028
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 107 1e-023
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 106 4e-023
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 106 4e-023
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 106 4e-023
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 74 1e-013
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 71 1e-012
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 67 1e-011
TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, pu... 67 1e-011
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 67 1e-011
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 67 1e-011
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 61 1e-009
TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA bin... 60 2e-009
TAIR9_protein||AT4G39260.4 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 59 6e-009
TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, pu... 58 8e-009
TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, pu... 58 8e-009
>TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 294
Score = 409 bits (1050), Expect = 2e-114
Identities = 226/301 (75%), Positives = 252/301 (83%), Gaps = 21/301 (6%)
Frame = -3
Query: 1052 SSSCFAIPL-SSSRSSSNAIPKCKTL--TSSCFYVASLK---ASTTSFHLSSLSR----Q 903
++SCFAIPL SSSRSS NAIPK KTL +SS Y+ SLK +S+ SFH SSLSR Q
Sbjct: 2 AASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQ 61
Query: 902 RLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEE---TEAEPVVTKKPRPCELYVC 732
LQ+KV SSSELSVLD E +EEE VK + E ++ ++AEPV KKPRPCELYVC
Sbjct: 62 PLQIKV--SSSELSVLD----EEKEEEVVKGEAEPNKDSVVSKAEPV--KKPRPCELYVC 113
Query: 731 NIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNE 552
NIPRSYDI QLLDMFQ FGTVISVEVSRNP+TGESRGSGYVTM SINSAK AIASLDG E
Sbjct: 114 NIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTE 173
Query: 551 VGGREMRVRYSVDMNPGTRKNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFS 372
VGGREMRVRYSVDMNPGTR+N LNSTPKKILMYES +KVYVGNLPW TQPDGLR+HFS
Sbjct: 174 VGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFS 233
Query: 371 QFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAALSLNGTEYEGRRIIVRQGIERTES 192
+FGT+VSTRVLHDRKTG+NRVFAFLSF + +ERDAALS NGT+YEGRRIIVR+GIE++ES
Sbjct: 234 KFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSES 293
Query: 191 * 189
*
Sbjct: 294 * 294
>TAIR9_protein||AT1G01080.2 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 295
Score = 404 bits (1038), Expect = 5e-113
Identities = 226/302 (74%), Positives = 252/302 (83%), Gaps = 22/302 (7%)
Frame = -3
Query: 1052 SSSCFAIPL-SSSRSSSNAIPKCKTL--TSSCFYVASLK---ASTTSFHLSSLSR----Q 903
++SCFAIPL SSSRSS NAIPK KTL +SS Y+ SLK +S+ SFH SSLSR Q
Sbjct: 2 AASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQ 61
Query: 902 RLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEE---TEAEPVVTKKPRPCELYVC 732
LQ+KV SSSELSVLD E +EEE VK + E ++ ++AEPV KKPRPCELYVC
Sbjct: 62 PLQIKV--SSSELSVLD----EEKEEEVVKGEAEPNKDSVVSKAEPV--KKPRPCELYVC 113
Query: 731 NIPRSYDITQLLDMFQSFGTVISVE-VSRNPETGESRGSGYVTMSSINSAKNAIASLDGN 555
NIPRSYDI QLLDMFQ FGTVISVE VSRNP+TGESRGSGYVTM SINSAK AIASLDG
Sbjct: 114 NIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGT 173
Query: 554 EVGGREMRVRYSVDMNPGTRKNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHF 375
EVGGREMRVRYSVDMNPGTR+N LNSTPKKILMYES +KVYVGNLPW TQPDGLR+HF
Sbjct: 174 EVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHF 233
Query: 374 SQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAALSLNGTEYEGRRIIVRQGIERTE 195
S+FGT+VSTRVLHDRKTG+NRVFAFLSF + +ERDAALS NGT+YEGRRIIVR+GIE++E
Sbjct: 234 SKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSE 293
Query: 194 S* 189
S*
Sbjct: 294 S* 295
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 121 bits (303), Expect = 8e-028
Identities = 92/285 (32%), Positives = 150/285 (52%), Gaps = 23/285 (8%)
Frame = -3
Query: 1025 SSSRSSSNAIPKCKTLTSSCFYVASLKASTTSFHLS-SLSRQRLQLKVFSSSSELSVLDE 849
+SS S+ IP ++SS + + S+ +L+ SL + L+ +SS ++ + +
Sbjct: 17 NSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLSLKSKTLR----NSSPVVTFVSQ 72
Query: 848 ATQEAEEEE----EVKADRETGEET-EAEPVV--TKKPRPCELYVCNIPRSYDITQLLDM 690
+ AEEEE + T +E+ E+E V + P +L+V N+P D L +
Sbjct: 73 TSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALAML 132
Query: 689 FQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRYSVDM 510
F+ GTV EV N +T +SRG G+VTMS++ A+ A+ + EV GR + V +
Sbjct: 133 FEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPR 192
Query: 509 NPGTRKNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDR 330
G+R ++ +Y++ +++YVGNLPW L FS+ G VV RV+ DR
Sbjct: 193 --GSRPE--------RQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDR 242
Query: 329 KTGKNRVFAFLSFANLDERDAAL-SLNGTEYEGRRIIVRQGIERT 198
+TG++R F F+ +N +E + A+ +L+G EGR I V ERT
Sbjct: 243 ETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERT 287
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 107 bits (267), Expect = 1e-023
Identities = 74/222 (33%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Frame = -3
Query: 881 SSSSELSVLDEATQEAEEEEEVKADRETGEETEAEPVVTKKPRPCELYVCNIPRSYDITQ 702
S S VL E EEEE ++ G +P + LY N+P + D
Sbjct: 48 SCSRRFRVLSETITVKLEEEE----KDDGASAVLDPPAAVNTK---LYFGNLPYNVDSAT 100
Query: 701 LLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRY 522
L + Q F VEV N +TG+SRG +VTMS++ I +LDG E GR ++V +
Sbjct: 101 LAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNF 160
Query: 521 SVDMNPGTRKNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRV 342
+ P K+ L E+ +K++VGNL W + L F + G VV RV
Sbjct: 161 ADKPKPN------------KEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARV 208
Query: 341 LHDRKTGKNRVFAFLSFANLDERDAAL-SLNGTEYEGRRIIV 219
+ D TG++R + F+ +++ E + AL SL+G E EGR I V
Sbjct: 209 VFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRV 250
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 106 bits (262), Expect = 4e-023
Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 26/266 (9%)
Frame = -3
Query: 953 SLKASTTSFHLSSLSRQ-RLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEETEAE 777
SL + + SF L+S S + K S +S + T E E EE+ AD A
Sbjct: 29 SLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFAD-------VAP 81
Query: 776 PVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSS 597
P +L+V N+P + D QL +F+S G V VEV + TG SRG G+VTMSS
Sbjct: 82 PKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSS 141
Query: 596 INSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNTSALNSTPKKILMYE--------- 444
++ + A +G E+ GR +R V+ P K + P+
Sbjct: 142 VSEVEAAAQQFNGYELDGRPLR----VNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGG 197
Query: 443 ----SPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE 276
S +VYVGNL W L FS+ G VV RV++DR +G+++ F F+++ + E
Sbjct: 198 SGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQE 257
Query: 275 -RDAALSLNGTEYEGRRIIVRQGIER 201
++A SL+G + +GR+I V + R
Sbjct: 258 VQNAIKSLDGADLDGRQIRVSEAEAR 283
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 106 bits (262), Expect = 4e-023
Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 6/250 (2%)
Frame = -3
Query: 959 VASLKASTTSFHLSSLSRQRLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEETEA 780
V S+K + SF S + ++ VFSS S+ ++ + A ET E+ A
Sbjct: 8 VVSIKPTIFSFQSESFTPLHTRVNVFSSKPFPSLAGTFSRSSRTRFIPYAVTETEEKPAA 67
Query: 779 EPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMS 600
++ R +Y+ NIPR+ QL + + G V V+V + +G SR G+ TM
Sbjct: 68 LDPSSEAAR--RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMK 125
Query: 599 SINSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNTSALNSTPKKILMYESPYKVYVG 420
S+ A + L+GN V GRE++V + + + + S L S + +SPYKVYVG
Sbjct: 126 SVEDANAVVEKLNGNTVEGREIKVNIT-EKPIASSPDLSVLQSEDSAFV--DSPYKVYVG 182
Query: 419 NLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAAL-SLNGTE 243
NL + L + FS+ G VVS +V T K+ F F++F++ ++ +AA+ +LN +
Sbjct: 183 NLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSL 242
Query: 242 YEGRRIIVRQ 213
EG++I V +
Sbjct: 243 LEGQKIRVNK 252
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 106 bits (262), Expect = 4e-023
Identities = 78/250 (31%), Positives = 128/250 (51%), Gaps = 6/250 (2%)
Frame = -3
Query: 959 VASLKASTTSFHLSSLSRQRLQLKVFSSSSELSVLDEATQEAEEEEEVKADRETGEETEA 780
V S+K + SF S + ++ VFSS S+ ++ + A ET E+ A
Sbjct: 8 VVSIKPTIFSFQSESFTPLHTRVNVFSSKPFPSLAGTFSRSSRTRFIPYAVTETEEKPAA 67
Query: 779 EPVVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMS 600
++ R +Y+ NIPR+ QL + + G V V+V + +G SR G+ TM
Sbjct: 68 LDPSSEAAR--RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMK 125
Query: 599 SINSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNTSALNSTPKKILMYESPYKVYVG 420
S+ A + L+GN V GRE++V + + + + S L S + +SPYKVYVG
Sbjct: 126 SVEDANAVVEKLNGNTVEGREIKVNIT-EKPIASSPDLSVLQSEDSAFV--DSPYKVYVG 182
Query: 419 NLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAAL-SLNGTE 243
NL + L + FS+ G VVS +V T K+ F F++F++ ++ +AA+ +LN +
Sbjct: 183 NLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSL 242
Query: 242 YEGRRIIVRQ 213
EG++I V +
Sbjct: 243 LEGQKIRVNK 252
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 74 bits (181), Expect = 1e-013
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = -3
Query: 527 RYSVDMNPGTRKNTSALNSTPKKI-LMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVS 351
RY ++ T + S P++ +YE ++VYVGNLPW L FS+ G VV
Sbjct: 213 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 272
Query: 350 TRVLHDRKTGKNRVFAFLSFANLDERDAALS-LNGTEYEGRRIIVRQGIER 201
RV++DR+TG++R F F++ +++DE + A+S L+G EGR I V ER
Sbjct: 273 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323
Score = 62 bits (149), Expect = 6e-010
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = -3
Query: 743 LYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASL 564
+YV N+P D +L +F G V+ V + ETG SRG G+VTMS ++ AI++L
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 563 DGNEVGGREMRVRYSVDMNP 504
DG + GR +RV + + P
Sbjct: 306 DGQNLEGRAIRVNVAEERPP 325
Score = 60 bits (144), Expect = 2e-009
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Frame = -3
Query: 875 SSELSVLDEATQEAEEEEEVKADRETGEETE-AEPVVTKKPRPCE---LYVCNIPRSYDI 708
S ++S DE+ +A E + + D G+ +E A + P P E L+V N+ +
Sbjct: 104 SQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNS 163
Query: 707 TQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRV 528
L +F+ GTV EV N ET +SRG G+VTMSS++ A+ A+ + ++ GR + V
Sbjct: 164 QALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTV 223
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 71 bits (172), Expect = 1e-012
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = -3
Query: 443 SPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAA 264
S K++VG + + T GLR+ FS++G VV +++ DR+TG++R FAF++F + +E A
Sbjct: 32 SSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNA 91
Query: 263 LSLNGTEYEGRRIIVRQGIER 201
+ L+G + GRRI V ER
Sbjct: 92 MQLDGQDLHGRRIRVNYATER 112
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 67 bits (163), Expect = 1e-011
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = -3
Query: 452 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE- 276
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F DE
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFK--DEK 58
Query: 275 --RDAALSLNGTEYEGRRIIVRQGIER 201
RDA +NG E +GR I V + R
Sbjct: 59 AMRDAIEEMNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, putative |
chr4:1376612-1379275 REVERSE
Length = 442
Score = 67 bits (163), Expect = 1e-011
Identities = 36/101 (35%), Positives = 59/101 (58%)
Frame = -3
Query: 773 VVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSI 594
V T+ P L++ NIPR + +L FQSFG V+S +V + TG S+ G+V+ S
Sbjct: 341 VQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQ 400
Query: 593 NSAKNAIASLDGNEVGGREMRVRYSVDMNPGTRKNTSALNS 471
+A+NAI ++G +GG++++V+ D N G + +L S
Sbjct: 401 AAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQPSSNPSLIS 441
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 67 bits (163), Expect = 1e-011
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = -3
Query: 452 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE- 276
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F DE
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFK--DEK 58
Query: 275 --RDAALSLNGTEYEGRRIIVRQGIER 201
RDA +NG E +GR I V + R
Sbjct: 59 AMRDAIEEMNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 67 bits (163), Expect = 1e-011
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = -3
Query: 452 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE- 276
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F DE
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFK--DEK 58
Query: 275 --RDAALSLNGTEYEGRRIIVRQGIER 201
RDA +NG E +GR I V + R
Sbjct: 59 AMRDAIEEMNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 61 bits (146), Expect = 1e-009
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = -3
Query: 434 KVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDERDAALS- 258
+VYVGNL T D LR+ FS +G VV V+ DR T ++R F F+++++ E +AA+S
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 257 LNGTEYEGRRIIVR 216
++G E GRR+ V+
Sbjct: 64 MDGKELNGRRVSVK 77
>TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA binding /
nucleotide binding | chr3:9671953-9673055 FORWARD
Length = 246
Score = 60 bits (144), Expect = 2e-009
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = -3
Query: 452 MYESP-YKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE 276
M E P Y+ ++G L W T GLRD F ++G +V +V+ D+ +G++R F F++F
Sbjct: 1 MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 275 RDAAL-SLNGTEYEGRRIIV 219
D A+ ++NG + +GR I V
Sbjct: 61 MDEAIAAMNGMDLDGRTITV 80
>TAIR9_protein||AT4G39260.4 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 106
Score = 59 bits (140), Expect = 6e-009
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Frame = -3
Query: 452 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLDE- 276
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F DE
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFK--DEK 58
Query: 275 --RDAALSLNGT 246
RDA +NG+
Sbjct: 59 AMRDAIEEMNGS 70
>TAIR9_protein||AT1G03457.1 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 430
Score = 58 bits (139), Expect = 8e-009
Identities = 28/85 (32%), Positives = 53/85 (62%)
Frame = -3
Query: 767 TKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINS 588
T+ P L++ NIPR ++ +L FQ FG V+S +V + TG S+ G+++ S +
Sbjct: 324 TEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAA 383
Query: 587 AKNAIASLDGNEVGGREMRVRYSVD 513
A+NAI +++G ++ G++++V+ D
Sbjct: 384 AQNAINTMNGCQLSGKKLKVQLKRD 408
>TAIR9_protein||AT1G03457.2 | Symbols: | RNA-binding protein, putative |
chr1:861109-864019 REVERSE
Length = 439
Score = 58 bits (139), Expect = 8e-009
Identities = 28/85 (32%), Positives = 53/85 (62%)
Frame = -3
Query: 767 TKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINS 588
T+ P L++ NIPR ++ +L FQ FG V+S +V + TG S+ G+++ S +
Sbjct: 333 TEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAA 392
Query: 587 AKNAIASLDGNEVGGREMRVRYSVD 513
A+NAI +++G ++ G++++V+ D
Sbjct: 393 AQNAINTMNGCQLSGKKLKVQLKRD 417
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,595,443,243
Number of Sequences: 33410
Number of Extensions: 10595443243
Number of Successful Extensions: 359217299
Number of sequences better than 0.0: 0
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