BLASTX 7.6.2
Query= UN20321 /QuerySize=1146
(1145 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis ... 109 1e-021
gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis ... 107 6e-021
gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis ... 97 6e-018
gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis ... 93 6e-017
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 80 7e-013
gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis ... 77 6e-012
gi|297819148|ref|XP_002877457.1| predicted protein [Arabidopsis ... 74 5e-011
gi|297834768|ref|XP_002885266.1| hypothetical protein ARALYDRAFT... 69 1e-009
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 69 2e-009
gi|18410189|ref|NP_565046.1| RNA-binding (RRM/RBD/RNP motifs) fa... 62 1e-007
gi|297818940|ref|XP_002877353.1| predicted protein [Arabidopsis ... 60 8e-007
gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis ... 59 1e-006
gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana] 59 1e-006
>gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 109 bits (271), Expect = 1e-021
Identities = 75/188 (39%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Frame = +3
Query: 237 ISGKPR-ALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVI 413
+S KPR ISV GY+ L E +K L + F+SCG +T + VP+D L +
Sbjct: 20 VSRKPRKTTISVEGYDTRLREYTLKLALEKHFASCGKITTIYVPRDYKRG-ILKSVTFMW 78
Query: 414 LFGDGAEEKALQLNGTDVGGWNALVKVESDEEDEEAARYRSSLINELMNDPKFWYGVSVR 593
+ GD AEEKALQL+GTDVGGW ALVK ++D + L V V
Sbjct: 79 IKGDDAEEKALQLSGTDVGGWTALVKPAPSQKDIMDPWCPAMLSKHETQ------RVRVT 132
Query: 594 GYDTSLPVDQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEARALALDGIRMGE 773
GYDT LP ++ AL EHFS CGE+T V V ++Y + E +AL L+G +MG
Sbjct: 133 GYDTWLPEIDIQIALCEHFSSCGEVTQVMVLPCGS-GSIYLEEERCEDKALKLNGCKMGG 191
Query: 774 FELDISGV 797
L + V
Sbjct: 192 MNLVVEPV 199
>gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 107 bits (265), Expect = 6e-021
Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 18/237 (7%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEK 440
ISV GY+ L + +K L + F+SCG++T + VP D + L A + + G+GAEEK
Sbjct: 34 ISVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERG-ILKSVAFMRIEGEGAEEK 92
Query: 441 ALQLNGTDVGGWNALVK-VESDEEDEEAARYRSSLINELMNDPKFWYGVSVRGYDTSLPV 617
ALQL+GTDVGGW A+VK S + + Y D K + + V GYDTSLP
Sbjct: 93 ALQLSGTDVGGWTAIVKPAPSQKVFMDDPWYAGPRCAAAPADTK-THMIRVTGYDTSLPK 151
Query: 618 DQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEA---RALALDGIRMGEFELDI 788
++ AL +HFS CG I V V + + F EGE +AL L G MG L +
Sbjct: 152 IDMQIALYKHFSSCGSIWKVIVLS----SGAAFIYLEGERCVDKALELSGRNMGGSTLVV 207
Query: 789 SGV---PSVLSNRPNPFGNGEIEIGLGYTVPAHMIEFANKDDDEIENKVIAFKKQRR 950
V P +L R P GYT+P+ ++E A K ++E ++ K++ +
Sbjct: 208 EPVVPRPDILKKR-RPLAC----TTTGYTLPSTLLEVAKKKKKKMETEMEMEKEKEK 259
>gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 97 bits (239), Expect = 6e-018
Identities = 72/193 (37%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEK 440
+SV GY+ L + +K L + F+SCG++T + VP D + L A + + G+GAEEK
Sbjct: 47 VSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERG-ILKSVAFMRIEGEGAEEK 105
Query: 441 ALQLNGTDVGGWNALVK-VESDEEDEEAARYRSSLINELMNDPKFWYGVSVRGYDTSLPV 617
ALQL+GTD+GGW A+VK + + RY D K + + + GYDTSLP
Sbjct: 106 ALQLSGTDIGGWTAIVKPAPWQKVFMDDPRYAGPRCAAAPADTK-THMIRITGYDTSLPK 164
Query: 618 DQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEA---RALALDGIRMGEFELDI 788
++ AL +HFS CG I V V + F EGE +AL L G MG L +
Sbjct: 165 IDMQIALYKHFSSCGSIWKVIV----LKSGAAFIYLEGERCVDKALELSGRNMGGSTLVV 220
Query: 789 SGV---PSVLSNR 818
V P +L R
Sbjct: 221 EPVVPRPDILKKR 233
>gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 93 bits (230), Expect = 6e-017
Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEK 440
+SV GY+ L + +K L + F+SCG++T + VP D + L A + + G+GAEEK
Sbjct: 47 VSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPTDFERG-ILKSVAFMRIEGEGAEEK 105
Query: 441 ALQLNGTDVGGWNALVK-VESDEEDEEAARYRSSLINELMNDPKFWYGVSVRGYDTSLPV 617
ALQL+GTDVGGW A+VK S + + Y D K + + V GYDTSLP
Sbjct: 106 ALQLSGTDVGGWTAIVKPAPSQKVFMDDPWYAGPRCAAAPADTK-THRIRVTGYDTSLPE 164
Query: 618 DQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEA---RALALDGIRMGEFELDI 788
++ AL +HFS CG ++ V V + + F +GE +AL L MG L +
Sbjct: 165 IDMQIALCKHFSSCGYVSKVIVLS----SGAAFLCLKGERCVDKALELSRCNMGGRTLVV 220
Query: 789 SGV---PSVLSNR 818
V P +L R
Sbjct: 221 EPVVPRPDILKKR 233
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 80 bits (195), Expect = 7e-013
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +3
Query: 249 PRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDG 428
P+ + VTGY+ +LPE DI+ L FSSCG++T V++PKD + LD AL+ + G G
Sbjct: 160 PQRKMIVTGYDTSLPEIDIQIRLSNHFSSCGEITNVMIPKDA--NGGLDSTALISILGAG 217
Query: 429 AEEKALQLNGTDVGGWNALV 488
+ EKAL+L G DVGGWN V
Sbjct: 218 SVEKALELGGCDVGGWNIAV 237
>gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 77 bits (187), Expect = 6e-012
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Frame = +3
Query: 192 LEFESEAAEKAFADRISGKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKD 371
LEF A+ + ISV GYN L E ++ L + F+SCG +T++ VP+D
Sbjct: 12 LEFNDSGAD----SQTHSSTSTAISVEGYNTTLKEYPLRLALAKHFASCGKITQIYVPRD 67
Query: 372 PDHSPNLDRRALVILFGDGAEEKALQLNGTDVGGWNALVK 491
L R + V + GD AEEKALQL+GTDVGGW A+VK
Sbjct: 68 -FKKKLLKRASFVWIEGDDAEEKALQLSGTDVGGWTAIVK 106
>gi|297819148|ref|XP_002877457.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 184
Score = 74 bits (179), Expect = 5e-011
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Frame = +3
Query: 381 SPNLDRRALVILFGDGAEEKALQLNGTDVGGWNALVKVESDEEDEEAARYRSSLINELMN 560
S L R A + + G+ A EKAL+L+GTDVGGW A+VK +++ +S
Sbjct: 39 SGTLKRVAFMRIEGENANEKALELSGTDVGGWTAIVKAAPWQKEVMDPWCPASAAAARPK 98
Query: 561 DPKFWYGVSVRGYDTSLPVDQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEAR 740
+ + V+V GYDTSLP +E A+ E S CGE+ + V L V + +
Sbjct: 99 E----HSVNVTGYDTSLPEIDIEMAVCEFLSSCGEVARIMV--LPSHARVSIIGEGCVDK 152
Query: 741 ALALDGIRMGEFELDISGVPSVLSNR 818
AL L G +G L++ V V NR
Sbjct: 153 ALQLSGCNVGGITLEVKPVVLVKINR 178
>gi|297834768|ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366
[Arabidopsis lyrata subsp. lyrata]
Length = 564
Score = 69 bits (168), Expect = 1e-009
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +3
Query: 180 RSERLEFESEAAEKAF--ADRISGKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTR 353
R RL+ +E ++ + G I V G+N +L ED+IKKEL LFS+CG+VTR
Sbjct: 380 RDVRLDLANERGQRNSNPGRKGEGSQSRTIFVRGFNSSLGEDEIKKELRSLFSNCGEVTR 439
Query: 354 VIVPKDPDHSPNLDRRALVILFGDGAEEKALQLNGTDVGGWNALVKVESDEEDEEAAR 527
V VP D + R L + ++ALQL G+++GGWN V+ ES D + R
Sbjct: 440 VHVPTDRETGA---CRGLAYIDLTSGFDEALQLRGSEIGGWNIHVE-ESRPRDSDEGR 493
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 69 bits (166), Expect = 2e-009
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEK 440
I V GY+ +L E ++ L + F+SCG++T++ VP+D L + + + G+GAE+K
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRD-FKKKILKSVSFMWIKGEGAEDK 84
Query: 441 ALQLNGTDVGGWNALVKVESDEE 509
ALQL+GTDVGGW +VK + E
Sbjct: 85 ALQLSGTDVGGWTVIVKPKPKHE 107
>gi|18410189|ref|NP_565046.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 335
Score = 62 bits (150), Expect = 1e-007
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Frame = +3
Query: 210 AAEKAFADRISGKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPN 389
A + F+ ++G+ SVTG++ +LP DDIK L + FSS G++TRV VP P H
Sbjct: 222 AKDSLFSVGVNGRS---FSVTGFDASLPVDDIKSALSKYFSSFGEITRVFVP--PSHGTG 276
Query: 390 LDRRALVILFGDGAEEKALQLNGTDVGGWNALV 488
I +GA EKAL+L DVGGW+ +V
Sbjct: 277 GSLGYAYIDLKEGA-EKALELGRHDVGGWDLVV 308
>gi|297818940|ref|XP_002877353.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 122
Score = 60 bits (143), Expect = 8e-007
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 327 FSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEKALQLNGTDVGGWNALVK 491
FSSCG + + VP+D + S L R A + + G+GAE+KAL+L+GTDVGGW A+ K
Sbjct: 17 FSSCGKIKHIYVPRDFE-SGTLKRVAFMRIEGEGAEDKALELSGTDVGGWTAIEK 70
>gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]
Length = 610
Score = 59 bits (142), Expect = 1e-006
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 243 GKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFG 422
G I V G++ +L ED+IKKEL FS CG+VTRV VP D + + R +
Sbjct: 449 GSQSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGAS---RGFAYIDL 505
Query: 423 DGAEEKALQLNGTDVGGWNALVKVESDEEDEEAAR 527
++ALQL+G+++GG N V+ ES D + R
Sbjct: 506 TSGFDEALQLSGSEIGGGNIHVE-ESRPRDSDEGR 539
>gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana]
Length = 636
Score = 59 bits (142), Expect = 1e-006
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 243 GKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFG 422
G I V G++ +L ED+IKKEL FS CG+VTRV VP D + + R +
Sbjct: 475 GSQSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGAS---RGFAYIDL 531
Query: 423 DGAEEKALQLNGTDVGGWNALVKVESDEEDEEAAR 527
++ALQL+G+++GG N V+ ES D + R
Sbjct: 532 TSGFDEALQLSGSEIGGGNIHVE-ESRPRDSDEGR 565
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,397,426,451,486
Number of Sequences: 15229318
Number of Extensions: 2397426451486
Number of Successful Extensions: 609866771
Number of sequences better than 0.0: 0
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