BLASTX 7.6.2
Query= UN20321 /QuerySize=1146
(1145 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 106 4e-023
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 92 7e-019
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 72 6e-013
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 62 5e-010
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 60 2e-009
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 60 2e-009
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 59 4e-009
TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular... 52 6e-007
TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular... 52 6e-007
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 106 bits (263), Expect = 4e-023
Identities = 73/191 (38%), Positives = 103/191 (53%), Gaps = 16/191 (8%)
Frame = +3
Query: 240 SGKPR---ALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALV 410
S KPR ISV GY+ L E +K L + F+SCG +T + VP+D + L A +
Sbjct: 21 SRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERG-ILKSVAFM 79
Query: 411 ILFGDGAEEKALQLNGTDVGGWNALVKVESDEEDEEAARYRSSLINE-LMNDPKF-WYGV 584
+ G+G EEKAL L+GTD GGW A+VK A ++ +++ L PK + V
Sbjct: 80 CIKGEGGEEKALLLSGTDAGGWTAIVK---------PALWQKEIMDPWLPGMPKLETHRV 130
Query: 585 SVRGYDTSLPVDQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEARALALDGIR 764
V GYDT +P ++ AL EHFS CGE+T V V ++Y + E +AL L+G +
Sbjct: 131 RVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVV-LPSGSGSIYLQGERCEDKALQLNGCK 189
Query: 765 MGEFELDISGV 797
MG L + V
Sbjct: 190 MGGMNLVVESV 200
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 92 bits (226), Expect = 7e-019
Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Frame = +3
Query: 249 PRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDG 428
P ISV GY+ +L + ++ L + F SCG++ V VP D + L A + + G+G
Sbjct: 111 PITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGV-LKSVAFLRIEGEG 169
Query: 429 AEEKALQLNGTDVGGWNALVKVESDEEDEEAARYRSSLINELMNDPKFWYGVSVRGYDTS 608
AE+KALQL+GTDV GW +VK E SS + + V GYD S
Sbjct: 170 AEDKALQLSGTDVVGWTVIVK------PSEIFYDNSSRAPATTPEASKIHRFRVTGYDAS 223
Query: 609 LPVDQVERALKEHFSDCGEITHVFVDTLDKLTNVYFSLQEGEA---RALALDGIRMGEFE 779
LP ++ AL +HFS CGEI V V L++ F GE +AL L G MGE
Sbjct: 224 LPEIDIQMALCKHFSSCGEIWQVTV-----LSSTAFVSLRGERCVDKALELSGCNMGERT 278
Query: 780 LDIS 791
L ++
Sbjct: 279 LVVN 282
Score = 69 bits (166), Expect = 6e-012
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEK 440
I V GY+ +L E ++ L + F+SCG++T++ VP+D L + + + G+GAE+K
Sbjct: 26 ICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPRD-FKKKILKSVSFMWIKGEGAEDK 84
Query: 441 ALQLNGTDVGGWNALVKVESDEE 509
ALQL+GTDVGGW +VK + E
Sbjct: 85 ALQLSGTDVGGWTVIVKPKPKHE 107
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 72 bits (175), Expect = 6e-013
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFGDGAEEK 440
ISVTGY+ LP + ++ EL +LFS CG++T V +P+ + S L A + G+G +K
Sbjct: 25 ISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNSS--LWSHAFIYFVGEGTADK 82
Query: 441 ALQLNGTDVGGWNALVKVESDEEDEE 518
ALQLNG+D+GGW + + ++E+
Sbjct: 83 ALQLNGSDMGGWTVDAEADPFPKEED 108
Score = 49 bits (114), Expect = 7e-006
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Frame = +3
Query: 582 VSVRGYDTSLPVDQVERALKEHFSDCGEITHVFV-----DTLDKLTNVYFSLQEGEARAL 746
+SV GYD LP + VE LK+ FS CGEIT V + +L +YF + +AL
Sbjct: 25 ISVTGYDIELPREHVESELKKLFSPCGEITDVHIPETRNSSLWSHAFIYFVGEGTADKAL 84
Query: 747 ALDGIRMGEFELDISGVP 800
L+G MG + +D P
Sbjct: 85 QLNGSDMGGWTVDAEADP 102
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 62 bits (150), Expect = 5e-010
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Frame = +3
Query: 210 AAEKAFADRISGKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPN 389
A + F+ ++G+ SVTG++ +LP DDIK L + FSS G++TRV VP P H
Sbjct: 222 AKDSLFSVGVNGRS---FSVTGFDASLPVDDIKSALSKYFSSFGEITRVFVP--PSHGTG 276
Query: 390 LDRRALVILFGDGAEEKALQLNGTDVGGWNALV 488
I +GA EKAL+L DVGGW+ +V
Sbjct: 277 GSLGYAYIDLKEGA-EKALELGRHDVGGWDLVV 308
Score = 56 bits (133), Expect = 4e-008
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +3
Query: 585 SVRGYDTSLPVDQVERALKEHFSDCGEITHVFV----DTLDKLTNVYFSLQEGEARALAL 752
SV G+D SLPVD ++ AL ++FS GEIT VFV T L Y L+EG +AL L
Sbjct: 237 SVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGSLGYAYIDLKEGAEKALEL 296
Query: 753 DGIRMGEFELDISGVPSVLSNRPNPF 830
+G ++L + + S PF
Sbjct: 297 GRHDVGGWDLVVGKAEPIRSGSTWPF 322
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 60 bits (145), Expect = 2e-009
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = +3
Query: 261 ISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILF----GDG 428
ISV GY+ ++ E +K L + F+SCG + + VP+ D + + L I+F G+
Sbjct: 23 ISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPR--DFKKRILKSPLFIIFHAKEGES 80
Query: 429 AEEKALQLNGTDVGGWNALVK 491
+KAL+L+GTDVGGWN +VK
Sbjct: 81 PVDKALELSGTDVGGWNVVVK 101
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 60 bits (144), Expect = 2e-009
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Frame = +3
Query: 180 RSERLEFESEAAEKAFADRISGKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVI 359
R ER F ++ F G I V G++ +L EDDIK L E FSSCG++ V
Sbjct: 378 RGERPAFTPQSGN--FRSGGDGGDEKKIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVS 435
Query: 360 VPKDPDHSPNLDRRALVILFGDGAEEKALQLNGTDVGGWNALV 488
VP D D + + + L +EKAL+LNG+D+GG LV
Sbjct: 436 VPIDRDTG---NSKGIAYLEFSEGKEKALELNGSDMGGGFYLV 475
Score = 54 bits (127), Expect = 2e-007
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +3
Query: 582 VSVRGYDTSLPVDQVERALKEHFSDCGEITHVFV----DTLDKLTNVYFSLQEGEARALA 749
+ V+G+D SL D ++ L+EHFS CGEI +V V DT + Y EG+ +AL
Sbjct: 403 IFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSEGKEKALE 462
Query: 750 LDGIRMG 770
L+G MG
Sbjct: 463 LNGSDMG 469
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 59 bits (142), Expect = 4e-009
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 243 GKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVILFG 422
G I V G++ +L ED+IKKEL FS CG+VTRV VP D + + R +
Sbjct: 475 GSQSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGAS---RGFAYIDL 531
Query: 423 DGAEEKALQLNGTDVGGWNALVKVESDEEDEEAAR 527
++ALQL+G+++GG N V+ ES D + R
Sbjct: 532 TSGFDEALQLSGSEIGGGNIHVE-ESRPRDSDEGR 565
>TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding /
nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins
in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
- 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr5:21011418-21013657 FORWARD
Length = 413
Score = 52 bits (123), Expect = 6e-007
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = +3
Query: 582 VSVRGYDTSLPVDQVERALKEHFSDCGEITHVFVDTLDK----LTNVYFSLQEGEARALA 749
+ V+GYD+SL + + RAL EHFS CG I+ ++ T D L +V+ + +G AL
Sbjct: 195 IFVKGYDSSLGENDLARALLEHFSPCGMISRIYFQTNDAGEAVLKHVFIVMLQGTEDALK 254
Query: 750 LDGIRMGEFELDI 788
L+G MG L++
Sbjct: 255 LNGSDMGGCNLEV 267
>TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING:
LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is:
RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has
23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:1605275-1606703 REVERSE
Length = 159
Score = 52 bits (123), Expect = 6e-007
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +3
Query: 237 ISGKPRALISVTGYNPNLPEDDIKKELIELFSSCGDVTRVIVPKDPDHSPNLDRRALVIL 416
+SG I VTGY+ LP DD+ L E FSSCG++ + +P D + + R +L
Sbjct: 17 VSGNDVGRIKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFDETNTILNRFWWLL 76
Query: 417 FGDGAEEKALQLNGTDVGGWNALVK 491
+ Q+N VGGWN V+
Sbjct: 77 PPPFLSNSSAQVN---VGGWNVSVE 98
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,595,443,243
Number of Sequences: 33410
Number of Extensions: 10595443243
Number of Successful Extensions: 359217299
Number of sequences better than 0.0: 0
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