BLASTX 7.6.2
Query= UN20323 /QuerySize=724
(723 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 282 3e-076
TAIR9_protein||AT4G01150.2 | Symbols: | unknown protein | chr4:... 196 1e-050
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 87 1e-017
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 87 1e-017
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 87 1e-017
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 72 3e-013
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 72 3e-013
TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular... 47 8e-006
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 282 bits (719), Expect = 3e-076
Identities = 146/170 (85%), Positives = 159/170 (93%), Gaps = 5/170 (2%)
Frame = -3
Query: 667 MAMTVAASSSVAVMIPRVPAVSARFSAVPYLPPLPPRSFGRSSFAVPLKLVSGNGLQKVE 488
MA++VAASSS+AVM+PRVPAVS R SAVPY LPPRSFGRSSF VPLKLVSGNGLQKVE
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPY---LPPRSFGRSSFTVPLKLVSGNGLQKVE 57
Query: 487 LMKTRASSSDETSTSIDTNELFTDLKEKWDGLENKTTVVIYGGGAIIAVWLSSILVGAIN 308
L+KTRASS E ++SIDTNEL TDLKEKWDGLENK+TV+IYGGGAI+AVWLSSI+VGAIN
Sbjct: 58 LLKTRASS--EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAIN 115
Query: 307 SVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIDSLKKKIAGTE* 158
SVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDI+SLKKKIAG+E*
Sbjct: 116 SVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE* 165
>TAIR9_protein||AT4G01150.2 | Symbols: | unknown protein | chr4:493692-494379
FORWARD
Length = 126
Score = 196 bits (497), Expect = 1e-050
Identities = 103/125 (82%), Positives = 115/125 (92%), Gaps = 5/125 (4%)
Frame = -3
Query: 667 MAMTVAASSSVAVMIPRVPAVSARFSAVPYLPPLPPRSFGRSSFAVPLKLVSGNGLQKVE 488
MA++VAASSS+AVM+PRVPAVS R SAVPY LPPRSFGRSSF VPLKLVSGNGLQKVE
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPY---LPPRSFGRSSFTVPLKLVSGNGLQKVE 57
Query: 487 LMKTRASSSDETSTSIDTNELFTDLKEKWDGLENKTTVVIYGGGAIIAVWLSSILVGAIN 308
L+KTRASS E ++SIDTNEL TDLKEKWDGLENK+TV+IYGGGAI+AVWLSSI+VGAIN
Sbjct: 58 LLKTRASS--EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAIN 115
Query: 307 SVPLL 293
SVPL+
Sbjct: 116 SVPLV 120
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 87 bits (213), Expect = 1e-017
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Frame = -3
Query: 658 TVAASSSVAVMIPRVP-----AVSARFSAVPYLPPLPPRSFGRSSFAVPL--KLVSGNGL 500
+++ SSS ++ R P + SA + LP LP +S R++ A K+V
Sbjct: 3 SLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVR---- 58
Query: 499 QKVELMKTRASSSDETSTSIDTNELFTDLK---EKWDGLENKTTVVIYGGGAIIAVWLSS 329
V T + T+T +T EL +K E W+ +++K + ++A+W S+
Sbjct: 59 NVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSA 118
Query: 328 ILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIDSLKKKIAGTE* 158
++ AI+ +PL+P V+ELVG+GYTGWF Y+ L+FK R+ L E + S K I G+ *
Sbjct: 119 GMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS* 175
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 87 bits (213), Expect = 1e-017
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Frame = -3
Query: 658 TVAASSSVAVMIPRVP-----AVSARFSAVPYLPPLPPRSFGRSSFAVPL--KLVSGNGL 500
+++ SSS ++ R P + SA + LP LP +S R++ A K+V
Sbjct: 3 SLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVR---- 58
Query: 499 QKVELMKTRASSSDETSTSIDTNELFTDLK---EKWDGLENKTTVVIYGGGAIIAVWLSS 329
V T + T+T +T EL +K E W+ +++K + ++A+W S+
Sbjct: 59 NVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSA 118
Query: 328 ILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIDSLKKKIAGTE* 158
++ AI+ +PL+P V+ELVG+GYTGWF Y+ L+FK R+ L E + S K I G+ *
Sbjct: 119 GMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS* 175
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 87 bits (213), Expect = 1e-017
Identities = 35/73 (47%), Positives = 58/73 (79%)
Frame = -3
Query: 379 TVVIYGGGAIIAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAE 200
++++YG GAI+A++L+S +V ++ ++PL PK+ME+VGLGYT WF RYLLFK +R+EL
Sbjct: 119 SILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKT 178
Query: 199 DIDSLKKKIAGTE 161
+ +KK++ G++
Sbjct: 179 KVSEIKKQVLGSD 191
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 72 bits (175), Expect = 3e-013
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Frame = -3
Query: 493 VELMKTRASSSDETSTSIDTNELFTDLKEKWDGLENKTTVVIYGGGAIIAVWLSSILVGA 314
+ LM + S ++ST +D + + ++ WD E++ ++ G I+A+W S L+ A
Sbjct: 50 ISLMVKASGESSDSSTDLD---VVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITA 106
Query: 313 INSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIDSLKKKIA 170
I+ +P++ ELVG+ ++ WF YRYLLFK R+EL++ + KK +A
Sbjct: 107 IDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIV---KKSVA 151
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 72 bits (175), Expect = 3e-013
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Frame = -3
Query: 532 VPLKLVSG-NGLQKVELMKTRASSSDETSTSIDTNELFTDLK-----EKWDGLENKTTVV 371
+P L G N L + L + +S S S ++++ TDL + WD E++ ++
Sbjct: 27 LPFSLTRGTNDLSPLSLTRNPSSISLMVKASGESSDSSTDLDVVSTIQNWDKSEDRLGLI 86
Query: 370 IYGGGAIIAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDID 191
G I+A+W S L+ AI+ +P++ ELVG+ ++ WF YRYLLFK R+EL++ +
Sbjct: 87 GLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIV- 145
Query: 190 SLKKKIA 170
KK +A
Sbjct: 146 --KKSVA 150
>TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 172 Blast hits to 172 proteins in 28 species:
Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 127;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 128
Score = 47 bits (111), Expect = 8e-006
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = -3
Query: 337 LSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIDSLKKKIA 170
+S+I AI+ +P++ ELVG+ ++ WF YRYLLFK R+EL++ + KK +A
Sbjct: 70 VSTIQNVAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIV---KKSVA 122
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,595,443,243
Number of Sequences: 33410
Number of Extensions: 10595443243
Number of Successful Extensions: 359217299
Number of sequences better than 0.0: 0
|
