BLASTX 7.6.2
Query= UN20360 /QuerySize=1630
(1629 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 222 8e-057
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 210 2e-053
sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1... 139 7e-032
sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1... 139 9e-032
sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 O... 138 1e-031
sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1... 138 2e-031
sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1... 137 3e-031
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 103 6e-021
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 102 7e-021
sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 OS=Homo sapie... 82 1e-014
sp|Q8QZY9|SF3B4_MOUSE Splicing factor 3B subunit 4 OS=Mus muscul... 82 1e-014
sp|Q6AYL5|SF3B4_RAT Splicing factor 3B subunit 4 OS=Rattus norve... 82 1e-014
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 75 9e-013
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 75 2e-012
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 75 2e-012
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 75 2e-012
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 68 2e-010
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 68 2e-010
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 222 bits (564), Expect = 8e-057
Identities = 129/309 (41%), Positives = 180/309 (58%), Gaps = 12/309 (3%)
Frame = +3
Query: 408 QKTHERGGSGGEDV---KTLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEG 578
+ T G S E+V TLW+G+L W+ E ++ ++ + VK+IRN+ T + G
Sbjct: 76 ENTSNYGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAG 135
Query: 579 YGFVEFHTRAAAEEVLQSFSGSIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDL 758
Y FVEF + A + S + +P + F+LNWAS ++++ + E SIFVGDL
Sbjct: 136 YCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSI-SKASEYSIFVGDL 193
Query: 759 SPDVTDTLLQELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALC 938
SP+V + + LFA RY S KSAK++ D T S+GYGFVRF DE ++ AL EM G +C
Sbjct: 194 SPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQIC 253
Query: 939 CNRQMRVGVATPKRAVANNQQQHSSQAVIVAGGHGANGFTGYGS--QSDGDSNNSTIFVG 1112
+R +RVG+ATPK ++ S +V GF D+ NST+FVG
Sbjct: 254 GDRPIRVGLATPK-----SKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVG 308
Query: 1113 GVGPDVTEEDLRQPFTQFGEVVSVKIPVGKGCGFVQLSNRKSADDAIQSLNGTVIGKNTV 1292
G+ V+EE+L+ F FGE+V VKIP GKGCGFVQ NR+SA+ AI L G +G + +
Sbjct: 309 GLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRI 368
Query: 1293 RLSWGRTPN 1319
RLSWGR N
Sbjct: 369 RLSWGRNQN 377
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 210 bits (534), Expect = 2e-053
Identities = 115/298 (38%), Positives = 171/298 (57%), Gaps = 13/298 (4%)
Frame = +3
Query: 429 GSGGEDVKTLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSE--GYGFVEFHT 602
G G + TLW+GDL WMD T++ ++ E +VKV+R+K + Y FV+F +
Sbjct: 78 GVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSS 137
Query: 603 RAAAEEVLQSFSGSIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTL 782
AAAE L ++ +++P + F+LNWA+ + + PE SIFVGDL P D+
Sbjct: 138 SAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSD 197
Query: 783 LQELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVG 962
L F YPS SAK+++D TG S+ YGFVRF E+E+ AL M G LC R +R+
Sbjct: 198 LFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRIS 257
Query: 963 VATPKRAVANNQQQHSSQAVIVAGGHGANGFTGYGSQSD---GDSNNSTIFVGGVGPDVT 1133
VA+PK +S A A G + D D N+T+FVGG+ +++
Sbjct: 258 VASPK--------SRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLS 309
Query: 1134 EEDLRQPFTQFGEVVSVKIPVGKGCGFVQLSNRKSADDAIQSLNGTVIGKNTVRLSWG 1307
E+DL+ F FG ++++KIP GKGCGFVQ S + +A+ AI ++ G ++G + +RL+WG
Sbjct: 310 EKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWG 367
>sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1 OS=Bos taurus
GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 139 bits (349), Expect = 7e-032
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 10/179 (5%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTRE-VSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQ 629
+LW+GDL +MDE ++ F+ E V SVK+IRN+ T GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 630 SFSGSIMPNS--EQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAE 803
+G +P + + F+LN+A++ +N PE S+FVGDL+PDV D +L E F +
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG-----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 118
Query: 804 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGAL-CCNRQMRVGVATPK 977
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA+ ++ +R+ VA PK
Sbjct: 119 VYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPK 176
>sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1 OS=Homo
sapiens GN=TRNAU1AP PE=1 SV=1
Length = 287
Score = 139 bits (348), Expect = 9e-032
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 10/179 (5%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTRE-VSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQ 629
+LW+GDL +MDE ++ F+ E V SVK+IRN+ T GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 630 SFSGSIMPNS--EQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAE 803
+G +P + + F+LN+A++ +N PE S+FVGDL+PDV D +L E F +
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG-----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 118
Query: 804 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGAL-CCNRQMRVGVATPK 977
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA+ ++ +R+ VA PK
Sbjct: 119 VYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 OS=Rattus
norvegicus GN=Trnau1ap PE=1 SV=1
Length = 287
Score = 138 bits (347), Expect = 1e-031
Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 12/180 (6%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTRE-VSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQ 629
+LW+GDL +MDE ++ F+ E V SVK+IRN+ T GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 630 SFSGSIMPNS--EQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAE 803
+G +P + + F+LN+A++ +N PE S+FVGDL+PDV D +L E F +
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG-----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 118
Query: 804 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGA--LCCNRQMRVGVATPK 977
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA L C + +R+ VA PK
Sbjct: 119 VYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGC-KPVRLSVAIPK 176
>sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1 OS=Mus
musculus GN=Trnau1ap PE=1 SV=2
Length = 287
Score = 138 bits (346), Expect = 2e-031
Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 12/180 (6%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTRE-VSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQ 629
+LW+GDL +MDE ++ F+ E V SVK+IRN+ T GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 630 SFSGSIMPNS--EQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAE 803
+G +P + + F+LN+A++ +N PE S+FVGDL+PDV D +L E F +
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG-----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 118
Query: 804 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGA--LCCNRQMRVGVATPK 977
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA L C + +R+ VA PK
Sbjct: 119 VYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGC-KPVRLSVAIPK 176
>sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1 OS=Pongo
abelii GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 137 bits (344), Expect = 3e-031
Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 10/179 (5%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTRE-VSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQ 629
+LW+GDL +MDE ++ F+ E V SVK+IRN+ T GY FVEF A AE+ L
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 630 SFSGSIMPNS--EQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAE 803
+G +P + + F+LN+ ++ +N PE S+FVGDL+PDV D +L E F +
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG-----KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 118
Query: 804 RYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGAL-CCNRQMRVGVATPK 977
YPS + KVV+D TG SKGYGFV+F DE E+ RALTE GA+ ++ +R+ VA PK
Sbjct: 119 VYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces
cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 103 bits (255), Expect = 6e-021
Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Frame = +3
Query: 651 PNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAERYPSVKSAK 830
P ++ FRLNWAS +T + PE S+FVGDLSP T+ L LF R+ SVK+ +
Sbjct: 166 PTFKRTFRLNWASGATLQSSIPST--PEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVR 223
Query: 831 VVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGVATPKRAVANNQQQHS 1010
V+ D TG S+ +GFVRFGDE+ER RAL EM+G R +RV ATP+ + Q+
Sbjct: 224 VMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQEQQ 283
Query: 1011 SQ 1016
Q
Sbjct: 284 QQ 285
Score = 82 bits (202), Expect = 8e-015
Identities = 37/76 (48%), Positives = 51/76 (67%)
Frame = +3
Query: 1083 DSNNSTIFVGGVGPDVTEEDLRQPFTQFGEVVSVKIPVGKGCGFVQLSNRKSADDAIQSL 1262
D N+T+FVGG+ P TE LR F FG +++V+IP GK CGFV+ R A+ +IQ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 1263 NGTVIGKNTVRLSWGR 1310
G ++G + +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 102 bits (254), Expect = 7e-021
Identities = 63/152 (41%), Positives = 86/152 (56%), Gaps = 12/152 (7%)
Frame = +3
Query: 570 SEGYGFVEFHTRAAAEEVLQSFSGSIMPN-SEQPFRLNWASFSTGEKRAVENN---GPEL 737
++GY FV+F + A L +G ++PN + +LNWA+ S NN G
Sbjct: 105 NQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNC 163
Query: 738 SIFVGDLSPDVTDTLLQELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALT 917
SIFVGDL+P+VT++ L ELF RY S AK+V D TG SKGYGFV+F + +E+ AL+
Sbjct: 164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALS 223
Query: 918 EMNGALCCNRQMRVGVATPKRAVANNQQQHSS 1013
EM G R ++VG + QQQH S
Sbjct: 224 EMQGVFLNGRAIKVG-------PTSGQQQHVS 248
Score = 86 bits (212), Expect = 5e-016
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +3
Query: 1083 DSNNSTIFVGGVGPDVTEEDLRQPFTQFGEVVSVKIPVGKGCGFVQLSNRKSADDAIQSL 1262
D NN+T+F+GG+ VTE++LR F FG +V VKIPVGK CGFVQ +R SA+ AI +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Query: 1263 NGTVIGKNTVRLSWGRT 1313
G I + VRLSWGR+
Sbjct: 369 QGFPIANSRVRLSWGRS 385
>sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4
PE=1 SV=1
Length = 424
Score = 82 bits (201), Expect = 1e-014
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQS 632
T++VG L + E L F V + + +++ T Q +GYGFVEF + A+ ++
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 633 FSGSIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAERYP 812
+++ +P R+N AS +N +IF+G+L P++ + LL + F+
Sbjct: 74 M--NMIKLYGKPIRVNKASAHN------KNLDVGANIFIGNLDPEIDEKLLYDTFSAFGV 125
Query: 813 SVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGVATPKRAVAN 992
+++ K++ D +TG SKGY F+ F + A+ MNG CNR + V A K +
Sbjct: 126 ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK---DS 182
Query: 993 NQQQHSSQA 1019
++H S A
Sbjct: 183 KGERHGSAA 191
>sp|Q8QZY9|SF3B4_MOUSE Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4
PE=2 SV=1
Length = 424
Score = 82 bits (201), Expect = 1e-014
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQS 632
T++VG L + E L F V + + +++ T Q +GYGFVEF + A+ ++
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 633 FSGSIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAERYP 812
+++ +P R+N AS +N +IF+G+L P++ + LL + F+
Sbjct: 74 M--NMIKLYGKPIRVNKASAHN------KNLDVGANIFIGNLDPEIDEKLLYDTFSAFGV 125
Query: 813 SVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGVATPKRAVAN 992
+++ K++ D +TG SKGY F+ F + A+ MNG CNR + V A K +
Sbjct: 126 ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK---DS 182
Query: 993 NQQQHSSQA 1019
++H S A
Sbjct: 183 KGERHGSAA 191
>sp|Q6AYL5|SF3B4_RAT Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4
PE=2 SV=1
Length = 424
Score = 82 bits (201), Expect = 1e-014
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Frame = +3
Query: 453 TLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEVLQS 632
T++VG L + E L F V + + +++ T Q +GYGFVEF + A+ ++
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 633 FSGSIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAERYP 812
+++ +P R+N AS +N +IF+G+L P++ + LL + F+
Sbjct: 74 M--NMIKLYGKPIRVNKASAHN------KNLDVGANIFIGNLDPEIDEKLLYDTFSAFGV 125
Query: 813 SVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGVATPKRAVAN 992
+++ K++ D +TG SKGY F+ F + A+ MNG CNR + V A K +
Sbjct: 126 ILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK---DS 182
Query: 993 NQQQHSSQA 1019
++H S A
Sbjct: 183 KGERHGSAA 191
>sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23
PE=1 SV=1
Length = 439
Score = 75 bits (184), Expect = 9e-013
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Frame = +3
Query: 444 DVKTLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEV 623
D +T++ L + L FS +V V++I ++ + +S+G +VEF +
Sbjct: 164 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA 223
Query: 624 L----QSFSG-SIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQ 788
+ Q G I+ + Q + A+ + ++ NG + ++VG L ++T+ +L+
Sbjct: 224 IGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQK---GNGGPMRLYVGSLHFNITEDMLR 280
Query: 789 ELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGVA 968
+F E + + + ++ DS+TGRSKGYGF+ F D E RAL ++NG R MRVG
Sbjct: 281 GIF-EPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHV 339
Query: 969 TPK 977
T +
Sbjct: 340 TER 342
>sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1
SV=2
Length = 530
Score = 75 bits (182), Expect = 2e-012
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Frame = +3
Query: 444 DVKTLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEV 623
D +T++ L + L FS +V V++I ++ + +S+G +VEF ++
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 624 LQSFSGSIMPNSEQPFRLNWASFSTGEKRAVENN------GPELSIFVGDLSPDVTDTLL 785
+ ++ P + + A+ NN GP + ++VG L ++T+ +L
Sbjct: 211 IGLTGQRVL---GVPIIVQASQAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDML 266
Query: 786 QELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGV 965
+ +F E + ++S ++++DS TGRSKGYGF+ F D E +AL ++NG R M+VG
Sbjct: 267 RGIF-EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 966 ATPK 977
T +
Sbjct: 326 VTER 329
>sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1
SV=1
Length = 530
Score = 75 bits (182), Expect = 2e-012
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Frame = +3
Query: 444 DVKTLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEF----HTRAA 611
D +T++ L + L FS +V V++I ++ + +S G +VEF R A
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLA 210
Query: 612 AEEVLQSFSG-SIMPNSEQPFRLNWASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQ 788
Q G I+ + Q + A+ + ++ + GP + ++VG L ++T+ +L+
Sbjct: 211 IGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKG--SAGP-MRLYVGSLHFNITEDMLR 267
Query: 789 ELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGVA 968
+F E + ++S ++++DS TGRSKGYGF+ F D E +AL ++NG R M+VG
Sbjct: 268 GIF-EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHV 326
Query: 969 TPK 977
T +
Sbjct: 327 TER 329
>sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2
SV=1
Length = 524
Score = 75 bits (182), Expect = 2e-012
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Frame = +3
Query: 444 DVKTLWVGDLLHWMDETYLHSCFSHTREVSSVKVIRNKQTLQSEGYGFVEFHTRAAAEEV 623
D +T++ L + L FS +V V++I ++ + +S+G +VEF ++
Sbjct: 151 DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLA 210
Query: 624 LQSFSGSIMPNSEQPFRLNWASFSTGEKRAVENN------GPELSIFVGDLSPDVTDTLL 785
+ ++ P + + A+ NN GP + ++VG L ++T+ +L
Sbjct: 211 IGLTGQRVL---GVPIIVQASQAEKNRAAAMANNLQKGSAGP-MRLYVGSLHFNITEDML 266
Query: 786 QELFAERYPSVKSAKVVIDSNTGRSKGYGFVRFGDEEERSRALTEMNGALCCNRQMRVGV 965
+ +F E + ++S ++++DS TGRSKGYGF+ F D E +AL ++NG R M+VG
Sbjct: 267 RGIF-EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH 325
Query: 966 ATPK 977
T +
Sbjct: 326 VTER 329
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 68 bits (165), Expect = 2e-010
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 684 ASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAERYPSVKSAKVVIDSNTGRSK 863
A S ++ +E + IF GDL +V D +L F+ RYPS AKV+ D TG++K
Sbjct: 276 AGTSWEDQSLLEWESDDFRIFCGDLGNEVNDDILARAFS-RYPSFLRAKVIRDKRTGKTK 334
Query: 864 GYGFVRFGDEEERSRALTEMNGALCCNRQMRV 959
GYGFV F D + RA+ EMNG +R +++
Sbjct: 335 GYGFVSFKDPNDYVRAMREMNGKYVGSRPIKL 366
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 68 bits (164), Expect = 2e-010
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +3
Query: 684 ASFSTGEKRAVENNGPELSIFVGDLSPDVTDTLLQELFAERYPSVKSAKVVIDSNTGRSK 863
A S + +E + IF GDL +V D +L F+ RYPS AKVV D TG++K
Sbjct: 286 AGVSWEDTSLLEWETDDFRIFCGDLGNEVNDDILARAFS-RYPSFLKAKVVRDKRTGKTK 344
Query: 864 GYGFVRFGDEEERSRALTEMNGALCCNRQMRV 959
GYGFV F D + RA+ EMNG +R +++
Sbjct: 345 GYGFVSFKDPNDYVRAMREMNGRYVGSRPIKL 376
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,450,105,564
Number of Sequences: 518415
Number of Extensions: 83450105564
Number of Successful Extensions: 573192055
Number of sequences better than 0.0: 0
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