BLASTX 7.6.2
Query= UN20382 /QuerySize=1750
(1749 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297806935|ref|XP_002871351.1| hypothetical protein ARALYDRAFT... 480 4e-133
gi|9759355|dbj|BAB10010.1| RNA helicase-like protein [Arabidopsi... 480 6e-133
gi|30682500|ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase... 480 6e-133
gi|3776025|emb|CAA09213.1| RNA helicase [Arabidopsis thaliana] 480 6e-133
gi|297806937|ref|XP_002871352.1| dead box RNA helicase [Arabidop... 451 2e-124
gi|15242323|ref|NP_196479.1| DEAD-box ATP-dependent RNA helicase... 447 4e-123
gi|14334882|gb|AAK59619.1| putative RNA helicase [Arabidopsis th... 445 2e-122
gi|147820620|emb|CAN67649.1| hypothetical protein VITISV_005080 ... 419 1e-114
gi|225454506|ref|XP_002277120.1| PREDICTED: hypothetical protein... 419 1e-114
gi|297745425|emb|CBI40505.3| unnamed protein product [Vitis vini... 418 2e-114
gi|10177044|dbj|BAB10456.1| RNA helicase [Arabidopsis thaliana] 415 2e-113
gi|109893656|sp|Q9FFQ1.2|RH31_ARATH RecName: Full=DEAD-box ATP-d... 415 2e-113
gi|255564739|ref|XP_002523364.1| dead box ATP-dependent RNA heli... 415 2e-113
gi|297797363|ref|XP_002866566.1| predicted protein [Arabidopsis ... 415 2e-113
>gi|297806935|ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703
[Arabidopsis lyrata subsp. lyrata]
Length = 794
Score = 480 bits (1234), Expect = 4e-133
Identities = 247/279 (88%), Positives = 258/279 (92%), Gaps = 7/279 (2%)
Frame = +3
Query: 21 DSSEEDDSGDDEAFVGKVVS------DNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIK 182
DSS+EDD DDE + K S D PS E KTSDSYLSKTRFDQFPLSPLSL+AIK
Sbjct: 284 DSSDEDDE-DDEPLIKKAASAKAVQTDKPSGEHVKTSDSYLSKTRFDQFPLSPLSLKAIK 342
Query: 183 DAGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSP 362
DAGFETMTVVQEATLPIIL+GKDVLAKAKTGTGKTVAFLLP+IEAVIKSPPASRD+RQ P
Sbjct: 343 DAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDNRQPP 402
Query: 363 IVVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATP 542
I+VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQ NPCQILVATP
Sbjct: 403 IIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATP 462
Query: 543 GRLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATV 722
GRL+DHIENTSGFATRL GVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATV
Sbjct: 463 GRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATV 522
Query: 723 PEEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
PEEVRQICH+ALKRDHEFINCVQEG+GETHQKV QMYM+
Sbjct: 523 PEEVRQICHVALKRDHEFINCVQEGTGETHQKVTQMYMI 561
Score = 439 bits (1127), Expect = 1e-120
Identities = 219/233 (93%), Positives = 227/233 (97%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLLYVLLKEHIADN DYKVIIFCTTAMVTRLVADLL QL+LNVREIHSRKPQ
Sbjct: 562 ASLDRHFSLLYVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLNLNVREIHSRKPQS 621
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSK+IILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 622 YRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 681
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYF+SSVKDLPI KSPLPPIDPEAVK+VQ+GL+QVEMKNKEAAYQAWLG
Sbjct: 682 GEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLG 741
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK 1537
YYKSQKMIARDTTRLVELANEFSRSMGL PPAIPKNVLGKMGLKNVPGLRTK
Sbjct: 742 YYKSQKMIARDTTRLVELANEFSRSMGLGSPPAIPKNVLGKMGLKNVPGLRTK 794
>gi|9759355|dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]
Length = 827
Score = 480 bits (1233), Expect = 6e-133
Identities = 246/278 (88%), Positives = 257/278 (92%), Gaps = 5/278 (1%)
Frame = +3
Query: 21 DSSEEDDSGDD-----EAFVGKVVSDNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKD 185
DSS+EDD D+ A V +D P+ E KTSDSYLSKTRFDQFPLSPLSL+AIKD
Sbjct: 317 DSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKD 376
Query: 186 AGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPI 365
AGFETMTVVQEATLPIIL+GKDVLAKAKTGTGKTVAFLLP+IEAVIKSPPASRDSRQ PI
Sbjct: 377 AGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPI 436
Query: 366 VVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPG 545
+VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQ NPCQILVATPG
Sbjct: 437 IVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPG 496
Query: 546 RLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 725
RL+DHIENTSGFATRL GVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP
Sbjct: 497 RLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 556
Query: 726 EEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
EEVRQICH+ALKRDHEFINCVQEGSGETHQKV QMYM+
Sbjct: 557 EEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMI 594
Score = 441 bits (1132), Expect = 3e-121
Identities = 220/233 (94%), Positives = 228/233 (97%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLL+VLLKEHIADN DYKVIIFCTTAMVTRLVADLL QLSLNVREIHSRKPQ
Sbjct: 595 ASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQS 654
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSK+IILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 655 YRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 714
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYF+SSVKDLPI KSPLPPIDPEAVK+VQ+GL+QVEMKNKEAAYQAWLG
Sbjct: 715 GEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLG 774
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK 1537
YYKSQKMIARDTTRLVELANEFSRSMGLD PPAIPKNVLGKMGLKNVPGLRTK
Sbjct: 775 YYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK 827
>gi|30682500|ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26
[Arabidopsis thaliana]
Length = 850
Score = 480 bits (1233), Expect = 6e-133
Identities = 246/278 (88%), Positives = 257/278 (92%), Gaps = 5/278 (1%)
Frame = +3
Query: 21 DSSEEDDSGDD-----EAFVGKVVSDNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKD 185
DSS+EDD D+ A V +D P+ E KTSDSYLSKTRFDQFPLSPLSL+AIKD
Sbjct: 340 DSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKD 399
Query: 186 AGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPI 365
AGFETMTVVQEATLPIIL+GKDVLAKAKTGTGKTVAFLLP+IEAVIKSPPASRDSRQ PI
Sbjct: 400 AGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPI 459
Query: 366 VVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPG 545
+VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQ NPCQILVATPG
Sbjct: 460 IVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPG 519
Query: 546 RLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 725
RL+DHIENTSGFATRL GVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP
Sbjct: 520 RLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 579
Query: 726 EEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
EEVRQICH+ALKRDHEFINCVQEGSGETHQKV QMYM+
Sbjct: 580 EEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMI 617
Score = 441 bits (1132), Expect = 3e-121
Identities = 220/233 (94%), Positives = 228/233 (97%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLL+VLLKEHIADN DYKVIIFCTTAMVTRLVADLL QLSLNVREIHSRKPQ
Sbjct: 618 ASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQS 677
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSK+IILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 678 YRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 737
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYF+SSVKDLPI KSPLPPIDPEAVK+VQ+GL+QVEMKNKEAAYQAWLG
Sbjct: 738 GEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLG 797
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK 1537
YYKSQKMIARDTTRLVELANEFSRSMGLD PPAIPKNVLGKMGLKNVPGLRTK
Sbjct: 798 YYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK 850
>gi|3776025|emb|CAA09213.1| RNA helicase [Arabidopsis thaliana]
Length = 595
Score = 480 bits (1233), Expect = 6e-133
Identities = 246/278 (88%), Positives = 257/278 (92%), Gaps = 5/278 (1%)
Frame = +3
Query: 21 DSSEEDDSGDD-----EAFVGKVVSDNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKD 185
DSS+EDD D+ A V +D P+ E KTSDSYLSKTRFDQFPLSPLSL+AIKD
Sbjct: 251 DSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKD 310
Query: 186 AGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPI 365
AGFETMTVVQEATLPIIL+GKDVLAKAKTGTGKTVAFLLP+IEAVIKSPPASRDSRQ PI
Sbjct: 311 AGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPI 370
Query: 366 VVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPG 545
+VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQ NPCQILVATPG
Sbjct: 371 IVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPG 430
Query: 546 RLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 725
RL+DHIENTSGFATRL GVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP
Sbjct: 431 RLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 490
Query: 726 EEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
EEVRQICH+ALKRDHEFINCVQEGSGETHQKV QMYM+
Sbjct: 491 EEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMI 528
>gi|297806937|ref|XP_002871352.1| dead box RNA helicase [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 451 bits (1159), Expect = 2e-124
Identities = 227/270 (84%), Positives = 247/270 (91%), Gaps = 1/270 (0%)
Frame = +3
Query: 33 EDDSGDDEAFVGKVVSDNP-STETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTV 209
E S DE + K S P ++ AKTSDSYLSKTRFDQFPLSPLSL+ I DAGF+TMTV
Sbjct: 41 EGKSDVDEPLIKKAASTKPVDSQIAKTSDSYLSKTRFDQFPLSPLSLKGIVDAGFKTMTV 100
Query: 210 VQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPT 389
VQEATLP+IL+GKD+LAKAKTGTGKTVAFLLPSIEAVIKSPPASRD+R PI+VLVVCPT
Sbjct: 101 VQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKSPPASRDNRHPPIIVLVVCPT 160
Query: 390 RELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIEN 569
RELA QAAAEAN LLKYHPSIGVQVVIGGTKLPTEQRR+Q +PCQILVATPGRL+DHI+N
Sbjct: 161 RELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDN 220
Query: 570 TSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICH 749
TSGFATRL GVKVLVLDEADHLLDMGFRR+IERIIAAVPKQRQTFLFSATVPEEVRQ+CH
Sbjct: 221 TSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVPEEVRQMCH 280
Query: 750 IALKRDHEFINCVQEGSGETHQKVKQMYMM 839
+ALKRDHEF+NCVQEG+GETHQKV QMYM+
Sbjct: 281 VALKRDHEFVNCVQEGAGETHQKVSQMYMI 310
Score = 421 bits (1082), Expect = 2e-115
Identities = 214/240 (89%), Positives = 222/240 (92%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLLY LLK+HIADN YKVIIFCTTAMVTRLVADLLG+LSLNVREIHSRKPQ
Sbjct: 311 ASLDRHFSLLYGLLKKHIADNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQS 370
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 371 YRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 430
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYFLSSVKDLPI KS LPPID EAVKKVQ+GL QVEM NKEAAYQAWLG
Sbjct: 431 GEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLTQVEMTNKEAAYQAWLG 490
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK*NFNSIH 1558
YYKSQK IARDTTRLVELANEFSRSMGL +PPAIP NVLGKMGLKNVPG+R F+ H
Sbjct: 491 YYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPINVLGKMGLKNVPGIRVAPGFDKKH 550
>gi|15242323|ref|NP_196479.1| DEAD-box ATP-dependent RNA helicase 25
[Arabidopsis thaliana]
Length = 563
Score = 447 bits (1148), Expect = 4e-123
Identities = 225/270 (83%), Positives = 247/270 (91%), Gaps = 1/270 (0%)
Frame = +3
Query: 33 EDDSGDDEAFVGKVVSDNP-STETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTV 209
E S DE + K S P T+ AKTSDSYLSKTRFDQFPLSPL+L+ I+DAGF+TMTV
Sbjct: 46 EGKSDVDEPLIKKPASTTPLVTQIAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTV 105
Query: 210 VQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPT 389
VQEATLP+IL+GKD+LAKAKTGTGKTVAFLLPSIEAVIK+PPASRD+R PI+VLVVCPT
Sbjct: 106 VQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPT 165
Query: 390 RELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIEN 569
RELA QAAAEAN LLKYHPSIGVQVVIGGTKLPTEQRR+Q +PCQILVATPGRL+DHI+N
Sbjct: 166 RELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDN 225
Query: 570 TSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICH 749
TSGFATRL GVKVLVLDEADHLLDMGFRR+IERIIAAVPKQRQTFLFSATV +EVRQICH
Sbjct: 226 TSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICH 285
Query: 750 IALKRDHEFINCVQEGSGETHQKVKQMYMM 839
+ALKRDHEF+NCVQEG+GETHQKV QMYM+
Sbjct: 286 VALKRDHEFVNCVQEGAGETHQKVSQMYMI 315
Score = 417 bits (1070), Expect = 5e-114
Identities = 211/237 (89%), Positives = 220/237 (92%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLLY LLK+HI DN YKVIIFCTTAMVTRLVADLLG+LSLNVREIHSRKPQ
Sbjct: 316 ASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQS 375
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 376 YRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 435
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYFLSSVKDLPI KS LPPID EAVKKVQ+GL QVEM NKEAAYQAWLG
Sbjct: 436 GEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLG 495
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK*NFN 1549
YYKSQK IARDTTRLVELANEFSRSMGL +PPAIP N+LGKMGLKNVPG+R F+
Sbjct: 496 YYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRVAPGFD 552
>gi|14334882|gb|AAK59619.1| putative RNA helicase [Arabidopsis thaliana]
Length = 563
Score = 445 bits (1143), Expect = 2e-122
Identities = 224/270 (82%), Positives = 247/270 (91%), Gaps = 1/270 (0%)
Frame = +3
Query: 33 EDDSGDDEAFVGKVVSDNP-STETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTV 209
E S DE + K S P T+ AKTSDSYLSKTRFDQFPLSPL+L+ I+DAGF+TMTV
Sbjct: 46 EGKSDVDEPLIKKPASTTPLVTQIAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTV 105
Query: 210 VQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPT 389
VQEATLP+IL+GK++LAKAKTGTGKTVAFLLPSIEAVIK+PPASRD+R PI+VLVVCPT
Sbjct: 106 VQEATLPLILQGKNILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPT 165
Query: 390 RELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIEN 569
RELA QAAAEAN LLKYHPSIGVQVVIGGTKLPTEQRR+Q +PCQILVATPGRL+DHI+N
Sbjct: 166 RELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDN 225
Query: 570 TSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICH 749
TSGFATRL GVKVLVLDEADHLLDMGFRR+IERIIAAVPKQRQTFLFSATV +EVRQICH
Sbjct: 226 TSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICH 285
Query: 750 IALKRDHEFINCVQEGSGETHQKVKQMYMM 839
+ALKRDHEF+NCVQEG+GETHQKV QMYM+
Sbjct: 286 VALKRDHEFVNCVQEGAGETHQKVSQMYMI 315
Score = 417 bits (1070), Expect = 5e-114
Identities = 211/237 (89%), Positives = 220/237 (92%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLLY LLK+HI DN YKVIIFCTTAMVTRLVADLLG+LSLNVREIHSRKPQ
Sbjct: 316 ASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQS 375
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 376 YRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 435
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYFLSSVKDLPI KS LPPID EAVKKVQ+GL QVEM NKEAAYQAWLG
Sbjct: 436 GEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLG 495
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK*NFN 1549
YYKSQK IARDTTRLVELANEFSRSMGL +PPAIP N+LGKMGLKNVPG+R F+
Sbjct: 496 YYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRVAPGFD 552
>gi|147820620|emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis
vinifera]
Length = 863
Score = 419 bits (1075), Expect = 1e-114
Identities = 211/279 (75%), Positives = 240/279 (86%), Gaps = 6/279 (2%)
Frame = +3
Query: 21 DSSEEDDSGDD------EAFVGKVVSDNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIK 182
+ ++DD D+ + G + + SDSYLS+TRFDQ P+SPLSL+AIK
Sbjct: 352 EEDDDDDDHDEVLKKNASSLFGAAAKEAVPRSSTGKSDSYLSETRFDQCPISPLSLKAIK 411
Query: 183 DAGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSP 362
DAG+E MTVVQEATLP+ILKGKDVLAKAKTGTGKTVAFLLPSIE ++KSPP SRD ++ P
Sbjct: 412 DAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEILVKSPPISRDQKRPP 471
Query: 363 IVVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATP 542
IVVLV+CPTRELASQAAAEANTLLKYHPS+GVQVVIGGT+L EQ+RMQANPCQILVATP
Sbjct: 472 IVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVATP 531
Query: 543 GRLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATV 722
GRL+DHIENT+GFATRL GVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQT LFSATV
Sbjct: 532 GRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATV 591
Query: 723 PEEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
PEEVRQICHIALKRDHEFIN VQEGS ETH +V+Q +++
Sbjct: 592 PEEVRQICHIALKRDHEFINTVQEGSEETHSQVRQTHII 630
>gi|225454506|ref|XP_002277120.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 851
Score = 419 bits (1075), Expect = 1e-114
Identities = 211/279 (75%), Positives = 240/279 (86%), Gaps = 6/279 (2%)
Frame = +3
Query: 21 DSSEEDDSGDD------EAFVGKVVSDNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIK 182
+ ++DD D+ + G + + SDSYLS+TRFDQ P+SPLSL+AIK
Sbjct: 340 EEDDDDDDHDEVLKKNASSLFGAAAKEAVPRSSTGKSDSYLSETRFDQCPISPLSLKAIK 399
Query: 183 DAGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSP 362
DAG+E MTVVQEATLP+ILKGKDVLAKAKTGTGKTVAFLLPSIE ++KSPP SRD ++ P
Sbjct: 400 DAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEILVKSPPISRDQKRPP 459
Query: 363 IVVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATP 542
IVVLV+CPTRELASQAAAEANTLLKYHPS+GVQVVIGGT+L EQ+RMQANPCQILVATP
Sbjct: 460 IVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQILVATP 519
Query: 543 GRLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATV 722
GRL+DHIENT+GFATRL GVKVLVLDEADHLLDMGFR+DIE+IIAAVPKQRQT LFSATV
Sbjct: 520 GRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLFSATV 579
Query: 723 PEEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
PEEVRQICHIALKRDHEFIN VQEGS ETH +V+Q +++
Sbjct: 580 PEEVRQICHIALKRDHEFINTVQEGSEETHSQVRQTHII 618
>gi|297745425|emb|CBI40505.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 418 bits (1074), Expect = 2e-114
Identities = 210/251 (83%), Positives = 233/251 (92%), Gaps = 1/251 (0%)
Frame = +3
Query: 87 PSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKA 266
P + T K SDSYLS+TRFDQ P+SPLSL+AIKDAG+E MTVVQEATLP+ILKGKDVLAKA
Sbjct: 250 PRSSTGK-SDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKA 308
Query: 267 KTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHP 446
KTGTGKTVAFLLPSIE ++KSPP SRD ++ PIVVLV+CPTRELASQAAAEANTLLKYHP
Sbjct: 309 KTGTGKTVAFLLPSIEILVKSPPISRDQKRPPIVVLVICPTRELASQAAAEANTLLKYHP 368
Query: 447 SIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEA 626
S+GVQVVIGGT+L EQ+RMQANPCQILVATPGRL+DHIENT+GFATRL GVKVLVLDEA
Sbjct: 369 SLGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEA 428
Query: 627 DHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEGSGE 806
DHLLDMGFR+DIE+IIAAVPKQRQT LFSATVPEEVRQICHIALKRDHEFIN VQEGS E
Sbjct: 429 DHLLDMGFRKDIEKIIAAVPKQRQTLLFSATVPEEVRQICHIALKRDHEFINTVQEGSEE 488
Query: 807 THQKVKQMYMM 839
TH +V+Q +++
Sbjct: 489 THSQVRQTHII 499
>gi|10177044|dbj|BAB10456.1| RNA helicase [Arabidopsis thaliana]
Length = 522
Score = 415 bits (1065), Expect = 2e-113
Identities = 203/248 (81%), Positives = 230/248 (92%)
Frame = +3
Query: 96 ETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKAKTG 275
+T +DSYL+KTRFD +PLSPLSL+AIKDAG+ETMTVVQEATLPIILKGKDVLAKAKTG
Sbjct: 42 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 101
Query: 276 TGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHPSIG 455
TGKTVAFLLPSIE V+KSPP S D+++ PI+ LV+CPTRELA+QAA EANTLLKYHPSIG
Sbjct: 102 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 161
Query: 456 VQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEADHL 635
VQVVIGGT+L EQ+RMQ NPCQILVATPGRL+DHIENT GFATRL GVKVLVLDEADHL
Sbjct: 162 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 221
Query: 636 LDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEGSGETHQ 815
LDMGFR+DIERII+AVPK+RQTFLFSATVPEEVRQIC +AL+RDHEF+NCV EG+ ETHQ
Sbjct: 222 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 281
Query: 816 KVKQMYMM 839
+V+QM+M+
Sbjct: 282 QVRQMHMI 289
>gi|109893656|sp|Q9FFQ1.2|RH31_ARATH RecName: Full=DEAD-box ATP-dependent RNA
helicase 31
Length = 716
Score = 415 bits (1065), Expect = 2e-113
Identities = 203/248 (81%), Positives = 230/248 (92%)
Frame = +3
Query: 96 ETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKAKTG 275
+T +DSYL+KTRFD +PLSPLSL+AIKDAG+ETMTVVQEATLPIILKGKDVLAKAKTG
Sbjct: 236 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 295
Query: 276 TGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHPSIG 455
TGKTVAFLLPSIE V+KSPP S D+++ PI+ LV+CPTRELA+QAA EANTLLKYHPSIG
Sbjct: 296 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 355
Query: 456 VQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEADHL 635
VQVVIGGT+L EQ+RMQ NPCQILVATPGRL+DHIENT GFATRL GVKVLVLDEADHL
Sbjct: 356 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 415
Query: 636 LDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEGSGETHQ 815
LDMGFR+DIERII+AVPK+RQTFLFSATVPEEVRQIC +AL+RDHEF+NCV EG+ ETHQ
Sbjct: 416 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 475
Query: 816 KVKQMYMM 839
+V+QM+M+
Sbjct: 476 QVRQMHMI 483
>gi|255564739|ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative
[Ricinus communis]
Length = 751
Score = 415 bits (1065), Expect = 2e-113
Identities = 207/278 (74%), Positives = 241/278 (86%), Gaps = 5/278 (1%)
Frame = +3
Query: 21 DSSEEDDSGDDEAFVGKVVSDNPSTETAK-----TSDSYLSKTRFDQFPLSPLSLRAIKD 185
D + ++ DDE + K VS + E + TSDSYLS +RFDQ P+SPLSL+ IKD
Sbjct: 241 DDANDEGCHDDEGILRKNVSSSLGFEKDRPNSPGTSDSYLSDSRFDQCPVSPLSLKGIKD 300
Query: 186 AGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPI 365
AG+E MTVVQEATLP+ILKGKDVLAKA+TGTGKTVAFLLP+IE V+KSPP RD ++ PI
Sbjct: 301 AGYEKMTVVQEATLPVILKGKDVLAKARTGTGKTVAFLLPAIEVVVKSPPTGRDQKRPPI 360
Query: 366 VVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPG 545
+V+V+CPTRELASQAAAEANTLLKYHPS+GVQVVIGGT+L EQ++MQANPCQILVATPG
Sbjct: 361 LVVVICPTRELASQAAAEANTLLKYHPSVGVQVVIGGTRLALEQKKMQANPCQILVATPG 420
Query: 546 RLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 725
RL+DHIENT+GFATRL GVKVL+LDEADHLLDMGFR+DIERIIAAVPKQRQT LFSATVP
Sbjct: 421 RLQDHIENTAGFATRLMGVKVLILDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATVP 480
Query: 726 EEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
EEVRQICHIAL+RDHEFIN V EG+ ETH +V+QM+++
Sbjct: 481 EEVRQICHIALRRDHEFINTVPEGTDETHTQVRQMHLV 518
>gi|297797363|ref|XP_002866566.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 721
Score = 415 bits (1065), Expect = 2e-113
Identities = 203/243 (83%), Positives = 229/243 (94%)
Frame = +3
Query: 111 SDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTV 290
+DSYL+KTRFDQ+PLSPLSL+AIKDAG+ETMTVVQEATLPIILKGKDVLAKAKTGTGKTV
Sbjct: 246 NDSYLTKTRFDQYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTV 305
Query: 291 AFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVI 470
AFLLPSIE V+KSPP S D+++ PI+ LV+CPTRELA+QAA EANTLLKYHPSIGVQVVI
Sbjct: 306 AFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVI 365
Query: 471 GGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGF 650
GGT+L EQ+RMQ NPCQILVATPGRL+DHIENT GFATRL GVKVLVLDEADHLLDMGF
Sbjct: 366 GGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGF 425
Query: 651 RRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEGSGETHQKVKQM 830
R+DIERII+AVPK+RQTFLFSATVPEEVRQIC +AL+RDHEF+NCV EG+ ETHQ+V+QM
Sbjct: 426 RKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQM 485
Query: 831 YMM 839
+M+
Sbjct: 486 HMI 488
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,397,426,451,486
Number of Sequences: 15229318
Number of Extensions: 2397426451486
Number of Successful Extensions: 609866771
Number of sequences better than 0.0: 0
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