BLASTX 7.6.2
Query= UN20382 /QuerySize=1750
(1749 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G08610.1 | Symbols: | DEAD box RNA helicase (... 480 2e-135
TAIR9_protein||AT5G08620.1 | Symbols: STRS2, ATRH25 | STRS2 (STR... 447 1e-125
TAIR9_protein||AT5G63630.1 | Symbols: | DEAD box RNA helicase, ... 415 6e-116
TAIR9_protein||AT1G63250.1 | Symbols: | DEAD box RNA helicase, ... 278 1e-074
TAIR9_protein||AT2G07750.1 | Symbols: | DEAD box RNA helicase, ... 275 1e-073
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 121 1e-027
TAIR9_protein||AT1G20920.2 | Symbols: | DEAD box RNA helicase, ... 121 1e-027
TAIR9_protein||AT3G18600.1 | Symbols: | DEAD/DEAH box helicase,... 93 5e-019
TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation ... 84 3e-016
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 80 4e-015
TAIR9_protein||AT5G60990.1 | Symbols: | DEAD/DEAH box helicase,... 78 2e-014
TAIR9_protein||AT5G26742.1 | Symbols: emb1138 | emb1138 (embryo ... 77 3e-014
TAIR9_protein||AT5G26742.2 | Symbols: emb1138 | emb1138 (embryo ... 77 3e-014
TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation ... 76 7e-014
TAIR9_protein||AT3G09720.1 | Symbols: | DEAD/DEAH box helicase,... 75 1e-013
>TAIR9_protein||AT5G08610.1 | Symbols: | DEAD box RNA helicase (RH26) |
chr5:2790341-2794059 FORWARD
Length = 851
Score = 480 bits (1233), Expect = 2e-135
Identities = 246/278 (88%), Positives = 257/278 (92%), Gaps = 5/278 (1%)
Frame = +3
Query: 21 DSSEEDDSGDD-----EAFVGKVVSDNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKD 185
DSS+EDD D+ A V +D P+ E KTSDSYLSKTRFDQFPLSPLSL+AIKD
Sbjct: 340 DSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKD 399
Query: 186 AGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPI 365
AGFETMTVVQEATLPIIL+GKDVLAKAKTGTGKTVAFLLP+IEAVIKSPPASRDSRQ PI
Sbjct: 400 AGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPI 459
Query: 366 VVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPG 545
+VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQ NPCQILVATPG
Sbjct: 460 IVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPG 519
Query: 546 RLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 725
RL+DHIENTSGFATRL GVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP
Sbjct: 520 RLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVP 579
Query: 726 EEVRQICHIALKRDHEFINCVQEGSGETHQKVKQMYMM 839
EEVRQICH+ALKRDHEFINCVQEGSGETHQKV QMYM+
Sbjct: 580 EEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMI 617
Score = 441 bits (1133), Expect = 8e-124
Identities = 220/234 (94%), Positives = 228/234 (97%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLL+VLLKEHIADN DYKVIIFCTTAMVTRLVADLL QLSLNVREIHSRKPQ
Sbjct: 618 ASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQS 677
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSK+IILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 678 YRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 737
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYF+SSVKDLPI KSPLPPIDPEAVK+VQ+GL+QVEMKNKEAAYQAWLG
Sbjct: 738 GEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLG 797
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK* 1540
YYKSQKMIARDTTRLVELANEFSRSMGLD PPAIPKNVLGKMGLKNVPGLRTK*
Sbjct: 798 YYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK* 851
>TAIR9_protein||AT5G08620.1 | Symbols: STRS2, ATRH25 | STRS2 (STRESS RESPONSE
SUPPRESSOR 2); ATP-dependent helicase/ RNA binding |
chr5:2794540-2797548 FORWARD
Length = 564
Score = 447 bits (1148), Expect = 1e-125
Identities = 225/270 (83%), Positives = 247/270 (91%), Gaps = 1/270 (0%)
Frame = +3
Query: 33 EDDSGDDEAFVGKVVSDNP-STETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTV 209
E S DE + K S P T+ AKTSDSYLSKTRFDQFPLSPL+L+ I+DAGF+TMTV
Sbjct: 46 EGKSDVDEPLIKKPASTTPLVTQIAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTV 105
Query: 210 VQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPT 389
VQEATLP+IL+GKD+LAKAKTGTGKTVAFLLPSIEAVIK+PPASRD+R PI+VLVVCPT
Sbjct: 106 VQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPT 165
Query: 390 RELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIEN 569
RELA QAAAEAN LLKYHPSIGVQVVIGGTKLPTEQRR+Q +PCQILVATPGRL+DHI+N
Sbjct: 166 RELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDN 225
Query: 570 TSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICH 749
TSGFATRL GVKVLVLDEADHLLDMGFRR+IERIIAAVPKQRQTFLFSATV +EVRQICH
Sbjct: 226 TSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICH 285
Query: 750 IALKRDHEFINCVQEGSGETHQKVKQMYMM 839
+ALKRDHEF+NCVQEG+GETHQKV QMYM+
Sbjct: 286 VALKRDHEFVNCVQEGAGETHQKVSQMYMI 315
Score = 417 bits (1070), Expect = 2e-116
Identities = 211/237 (89%), Positives = 220/237 (92%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLLY LLK+HI DN YKVIIFCTTAMVTRLVADLLG+LSLNVREIHSRKPQ
Sbjct: 316 ASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQS 375
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE
Sbjct: 376 YRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 435
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEGVL+LAPWEEYFLSSVKDLPI KS LPPID EAVKKVQ+GL QVEM NKEAAYQAWLG
Sbjct: 436 GEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLG 495
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK*NFN 1549
YYKSQK IARDTTRLVELANEFSRSMGL +PPAIP N+LGKMGLKNVPG+R F+
Sbjct: 496 YYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRVAPGFD 552
>TAIR9_protein||AT5G63630.1 | Symbols: | DEAD box RNA helicase, putative |
chr5:25472598-25475196 REVERSE
Length = 523
Score = 415 bits (1065), Expect = 6e-116
Identities = 203/248 (81%), Positives = 230/248 (92%)
Frame = +3
Query: 96 ETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKAKTG 275
+T +DSYL+KTRFD +PLSPLSL+AIKDAG+ETMTVVQEATLPIILKGKDVLAKAKTG
Sbjct: 42 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 101
Query: 276 TGKTVAFLLPSIEAVIKSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHPSIG 455
TGKTVAFLLPSIE V+KSPP S D+++ PI+ LV+CPTRELA+QAA EANTLLKYHPSIG
Sbjct: 102 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 161
Query: 456 VQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEADHL 635
VQVVIGGT+L EQ+RMQ NPCQILVATPGRL+DHIENT GFATRL GVKVLVLDEADHL
Sbjct: 162 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 221
Query: 636 LDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEGSGETHQ 815
LDMGFR+DIERII+AVPK+RQTFLFSATVPEEVRQIC +AL+RDHEF+NCV EG+ ETHQ
Sbjct: 222 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 281
Query: 816 KVKQMYMM 839
+V+QM+M+
Sbjct: 282 QVRQMHMI 289
Score = 400 bits (1027), Expect = 2e-111
Identities = 196/234 (83%), Positives = 213/234 (91%)
Frame = +2
Query: 839 ASLDRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQG 1018
ASLDRHFSLLY LL+EHI N DYKVI+FCTTAMVT+LVADLLG+L+LNVREIHSRKPQ
Sbjct: 290 ASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQS 349
Query: 1019 YRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKE 1198
YRT+VS+EFRKSK +ILVTSDVSARGVDYPDV+LV+Q+GLP DREQYIHRLGRTGRKGKE
Sbjct: 350 YRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKE 409
Query: 1199 GEGVLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLG 1378
GEG+L+LAPWEEYFLSS+KDLPI KSPLP IDPE VKKVQ+ L VEM+NKEAAYQAWLG
Sbjct: 410 GEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVEMRNKEAAYQAWLG 469
Query: 1379 YYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGLRTK* 1540
YY SQKMI RD RLVELANEFSRSMGLD PPAIPK +LGKMGLKNVPGLR K*
Sbjct: 470 YYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNVPGLRAK* 523
>TAIR9_protein||AT1G63250.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:23463284-23466451 REVERSE
Length = 799
Score = 278 bits (709), Expect = 1e-074
Identities = 131/227 (57%), Positives = 172/227 (75%)
Frame = +2
Query: 848 DRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRT 1027
+ HF L+ LLKEHI + PDYK+I+FC+T MVT L+ LL ++ LNVREIH+RKPQ +RT
Sbjct: 568 ESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRT 627
Query: 1028 KVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEG 1207
+VSDEF++S +ILVTSDVSARG++YPDV+LV+Q+G+PSDREQYIHRLGRTGR+GK GEG
Sbjct: 628 RVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEG 687
Query: 1208 VLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLGYYK 1387
+L++APWE YFL +KDLP+ P P +D +V + + +++ KEAAY AWLGYY
Sbjct: 688 LLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYYN 747
Query: 1388 SQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGL 1528
S + RD T L ELAN F S+GL+ PPA+ + KMGLK + G+
Sbjct: 748 SVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGI 794
Score = 273 bits (696), Expect = 4e-073
Identities = 135/250 (54%), Positives = 184/250 (73%), Gaps = 1/250 (0%)
Frame = +3
Query: 81 DNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLA 260
DN E + DS S RFD+ +SPL+L+A+ +G MT VQ+ATL L GKD L
Sbjct: 311 DNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALV 370
Query: 261 KAKTGTGKTVAFLLPSIEAVIKSPPASRD-SRQSPIVVLVVCPTRELASQAAAEANTLLK 437
KAKTGTGK++AFLLP+IE V+K+ + + ++ +PI L++CPTRELASQ AAE LLK
Sbjct: 371 KAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLK 430
Query: 438 YHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVL 617
+H IGVQ +IGGT+ +Q+R+++ PCQIL+ATPGRL DHIEN SG +RL +K+ ++
Sbjct: 431 FHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIV 490
Query: 618 DEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEG 797
DEAD LLD+GFRRD+E+II +P+QRQ+ LFSAT+P+EVR++ + LKRDH +I+ + G
Sbjct: 491 DEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLG 550
Query: 798 SGETHQKVKQ 827
ETH KV+Q
Sbjct: 551 CVETHDKVRQ 560
>TAIR9_protein||AT2G07750.1 | Symbols: | DEAD box RNA helicase, putative |
chr2:3576483-3580396 FORWARD
Length = 846
Score = 275 bits (701), Expect = 1e-073
Identities = 130/227 (57%), Positives = 171/227 (75%)
Frame = +2
Query: 848 DRHFSLLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRT 1027
+ HF L+ LLKEHI + PDYK+I+FC+T MVT L+ LL ++ LNVREIH+RKPQ +RT
Sbjct: 615 ESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRT 674
Query: 1028 KVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEG 1207
VSDEF++S +ILVTSDVSARG++YPDV+LV+Q+G+PSDREQYIHRLGRTGR+GK G+G
Sbjct: 675 CVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKG 734
Query: 1208 VLMLAPWEEYFLSSVKDLPINKSPLPPIDPEAVKKVQRGLNQVEMKNKEAAYQAWLGYYK 1387
+L++APWE YFL +KDLP+ P P +D +V + + +++ KEAAY AWLGYY
Sbjct: 735 LLLIAPWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYYN 794
Query: 1388 SQKMIARDTTRLVELANEFSRSMGLDMPPAIPKNVLGKMGLKNVPGL 1528
S + RD T L ELAN F S+GL+ PPA+ + KMGLK + G+
Sbjct: 795 SVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGI 841
Score = 272 bits (693), Expect = 9e-073
Identities = 136/250 (54%), Positives = 183/250 (73%), Gaps = 1/250 (0%)
Frame = +3
Query: 81 DNPSTETAKTSDSYLSKTRFDQFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLA 260
DN E + DS S RFD+ +SPL+L+A+ +G MT VQ+ATL L GKD L
Sbjct: 358 DNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALV 417
Query: 261 KAKTGTGKTVAFLLPSIEAVIKSPPASRD-SRQSPIVVLVVCPTRELASQAAAEANTLLK 437
KAKTGTGK++AFLLP+IE V+K+ + + + +PI VL++CPTRELASQ AAE LLK
Sbjct: 418 KAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLK 477
Query: 438 YHPSIGVQVVIGGTKLPTEQRRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVL 617
H IGVQ +IGGT+ +Q+R+++ PCQIL+ATPGRL DHIEN SG +RL +K+ ++
Sbjct: 478 NHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIV 537
Query: 618 DEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHIALKRDHEFINCVQEG 797
DEAD LLD+GF+RD+E+II +P+QRQ+ LFSAT+P+EVR++ + LKRDH +I+ + G
Sbjct: 538 DEADLLLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLG 597
Query: 798 SGETHQKVKQ 827
ETH KVKQ
Sbjct: 598 CVETHDKVKQ 607
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 121 bits (303), Expect = 1e-027
Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 9/212 (4%)
Frame = +3
Query: 144 QFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVI 323
Q L+ L +K +E +Q LPII+ G+D + AKTG+GKT+ F+LP + +
Sbjct: 533 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 592
Query: 324 KSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHPSIGVQV--VIGGTKLPTEQ 497
PP ++ PI LV+ PTREL Q ++ + K+ +G++ V GG+ + +
Sbjct: 593 DQPPV--EAGDGPI-GLVMAPTRELVQQIHSD---IRKFSKPLGIRCVPVYGGSGVAQQI 646
Query: 498 RRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIA 677
++ +I+V TPGR+ D + +SG T L V LV+DEAD + DMGF I RII
Sbjct: 647 SELKRG-TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQ 705
Query: 678 AVPKQRQTFLFSATVPEEVRQICHIALKRDHE 773
+ +RQT LFSAT P +V + L + E
Sbjct: 706 NIRPERQTVLFSATFPRQVETLARKVLNKPVE 737
>TAIR9_protein||AT1G20920.2 | Symbols: | DEAD box RNA helicase, putative |
chr1:7286356-7288842 FORWARD
Length = 829
Score = 121 bits (303), Expect = 1e-027
Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 9/212 (4%)
Frame = +3
Query: 144 QFPLSPLSLRAIKDAGFETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEAVI 323
Q L+ L +K +E +Q LPII+ G+D + AKTG+GKT+ F+LP + +
Sbjct: 195 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 254
Query: 324 KSPPASRDSRQSPIVVLVVCPTRELASQAAAEANTLLKYHPSIGVQV--VIGGTKLPTEQ 497
PP ++ PI LV+ PTREL Q ++ + K+ +G++ V GG+ + +
Sbjct: 255 DQPPV--EAGDGPI-GLVMAPTRELVQQIHSD---IRKFSKPLGIRCVPVYGGSGVAQQI 308
Query: 498 RRMQANPCQILVATPGRLEDHIENTSGFATRLNGVKVLVLDEADHLLDMGFRRDIERIIA 677
++ +I+V TPGR+ D + +SG T L V LV+DEAD + DMGF I RII
Sbjct: 309 SELKRG-TEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQ 367
Query: 678 AVPKQRQTFLFSATVPEEVRQICHIALKRDHE 773
+ +RQT LFSAT P +V + L + E
Sbjct: 368 NIRPERQTVLFSATFPRQVETLARKVLNKPVE 399
>TAIR9_protein||AT3G18600.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:6399724-6403007 REVERSE
Length = 569
Score = 93 bits (229), Expect = 5e-019
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 16/242 (6%)
Frame = +2
Query: 806 DASKGQTNVHDASLDRHFSLL-----YVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLG 970
D G+ V + L++ + ++ +LL + N + K+++F +T + +++
Sbjct: 296 DVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMK 355
Query: 971 QLSLNVREIHSRKPQGYRTKVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDR 1150
++V +IH Q RTK +F K+K IL+ +DV+ARG+D P V ++Q P
Sbjct: 356 ISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKP 415
Query: 1151 EQYIHRLGRTGR-KGKEGEGVLMLAPWEEYFLS-------SVKDLPINKSPLPPIDPEAV 1306
+YIHR+GRT R +G +G+ +L+L P E F+ VK+L N+ L +
Sbjct: 416 TEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQSALE 475
Query: 1307 KKVQRGLNQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELANEFSRSMGLDMPPAIPK 1486
K V + N K + AY+A+L Y S + ++L + S PP +
Sbjct: 476 KCVAKDYNL--NKLAKDAYRAYLSAYNSHSLKDIFNVHRLDLL-AVAESFCFSSPPKVNL 532
Query: 1487 NV 1492
N+
Sbjct: 533 NI 534
>TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase,
putative | chr3:6863790-6866242 FORWARD
Length = 409
Score = 84 bits (205), Expect = 3e-016
Identities = 39/100 (39%), Positives = 61/100 (61%)
Frame = +2
Query: 911 KVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDEFRKSKSIILVTSDVSA 1090
+ +IFC T +++ + + V +H PQ R + +EFR S +L+T+DV A
Sbjct: 276 QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWA 335
Query: 1091 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGV 1210
RG+D VSLV+ LP++RE YIHR+GR+GR G++G +
Sbjct: 336 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAI 375
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 80 bits (196), Expect = 4e-015
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +2
Query: 911 KVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDEFRKSKSIILVTSDVSA 1090
KVIIFC+T + +A +G+ IH K QG R V ++FR KS +L+ +DV+A
Sbjct: 682 KVIIFCSTKRLCDHLARSVGR-HFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 740
Query: 1091 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEG 1201
RG+D D+ +V+ P+ E Y+HR+GRTGR G G
Sbjct: 741 RGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATG 777
>TAIR9_protein||AT5G60990.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH10) | chr5:24546601-24549148 REVERSE
Length = 457
Score = 78 bits (190), Expect = 2e-014
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Frame = +2
Query: 863 LLYVLLKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDE 1042
L+Y+L ++ P+ +IF T TR +A +L L I + Q R ++
Sbjct: 251 LVYIL-----SEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNK 305
Query: 1043 FRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLMLA 1222
F+ + ILV +DV++RG+D P V +V+ +P++ + YIHR+GRT R G+ G G+ ++
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVN 365
Query: 1223 PWEEYFLSSVKDLPINKSPLPPIDPEAV 1306
+E + ++ L K P P + + V
Sbjct: 366 QYELEWYIQIEKLIGKKLPEYPAEEDEV 393
>TAIR9_protein||AT5G26742.1 | Symbols: emb1138 | emb1138 (embryo defective
1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/
nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSE
Length = 748
Score = 77 bits (188), Expect = 3e-014
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = +2
Query: 911 KVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDEFRKSKSIILVTSDVSA 1090
K I+F T V+ L S+ +H Q R + + FR+ K +LV +DV++
Sbjct: 353 KTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVAS 411
Query: 1091 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLM 1216
RG+D P+V LV+ LP+D E ++HR GRTGR GKEG +LM
Sbjct: 412 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILM 453
>TAIR9_protein||AT5G26742.2 | Symbols: emb1138 | emb1138 (embryo defective
1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/
nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSE
Length = 749
Score = 77 bits (188), Expect = 3e-014
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Frame = +2
Query: 911 KVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDEFRKSKSIILVTSDVSA 1090
K I+F T V+ L S+ +H Q R + + FR+ K +LV +DV++
Sbjct: 353 KTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVAS 411
Query: 1091 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLM 1216
RG+D P+V LV+ LP+D E ++HR GRTGR GKEG +LM
Sbjct: 412 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILM 453
>TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:19047960-19049967
FORWARD
Length = 393
Score = 76 bits (185), Expect = 7e-014
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = +2
Query: 911 KVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDEFRKSKSIILVTSDVSA 1090
+ IIFC T + + + + V +H K Q R + ++FR KS +L+ SDV A
Sbjct: 263 QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWA 322
Query: 1091 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGV 1210
RG+D VS V+ +P++ E YIHR+GR GR G+EG +
Sbjct: 323 RGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAI 362
>TAIR9_protein||AT3G09720.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:2980483-2983268 REVERSE
Length = 542
Score = 75 bits (183), Expect = 1e-013
Identities = 38/125 (30%), Positives = 66/125 (52%)
Frame = +2
Query: 878 LKEHIADNPDYKVIIFCTTAMVTRLVADLLGQLSLNVREIHSRKPQGYRTKVSDEFRKSK 1057
L++ A++ + V+IF + + + D L ++ IHS P G R D+FR +
Sbjct: 371 LRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGE 430
Query: 1058 SIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLMLAPWEEY 1237
+L+ +DV ARG+D+ ++ V+ P YIHR+GR+GR G+ GE + +
Sbjct: 431 KWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVP 490
Query: 1238 FLSSV 1252
FL ++
Sbjct: 491 FLRNI 495
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,638,714,785
Number of Sequences: 33410
Number of Extensions: 10638714785
Number of Successful Extensions: 359258609
Number of sequences better than 0.0: 0
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