BLASTX 7.6.2
Query= UN20383 /QuerySize=859
(858 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 237 7e-063
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 237 7e-063
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 99 4e-021
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 95 6e-020
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 94 1e-019
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 69 4e-012
TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular... 55 5e-008
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 237 bits (604), Expect = 7e-063
Identities = 122/174 (70%), Positives = 144/174 (82%), Gaps = 9/174 (5%)
Frame = -2
Query: 755 MASLSISSSSTIINSRASPTR--QASFSSPSCISLPMLP----PKPFQSTSYCRKIARNV 594
MASLS+SSSSTII+SRA P+R AS SSPSCISLP LP + ++T+YCRKI RNV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNV 60
Query: 593 LTKATEVEASA---TAESDTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGSTGL 423
+T+AT A T E++TTELPEIVKTAQEAWEKV+DKYAIGSLAFA +VALWGS G+
Sbjct: 61 VTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 120
Query: 422 ISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILGSN 261
ISAID+LPL PGV ELVGIGYTGWF YKN++FKPDRE +F+KVK TY++ILGS+
Sbjct: 121 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 237 bits (604), Expect = 7e-063
Identities = 122/174 (70%), Positives = 144/174 (82%), Gaps = 9/174 (5%)
Frame = -2
Query: 755 MASLSISSSSTIINSRASPTR--QASFSSPSCISLPMLP----PKPFQSTSYCRKIARNV 594
MASLS+SSSSTII+SRA P+R AS SSPSCISLP LP + ++T+YCRKI RNV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNV 60
Query: 593 LTKATEVEASA---TAESDTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGSTGL 423
+T+AT A T E++TTELPEIVKTAQEAWEKV+DKYAIGSLAFA +VALWGS G+
Sbjct: 61 VTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 120
Query: 422 ISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILGSN 261
ISAID+LPL PGV ELVGIGYTGWF YKN++FKPDRE +F+KVK TY++ILGS+
Sbjct: 121 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 99 bits (244), Expect = 4e-021
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = -2
Query: 608 IARNVLTKATEVEASATAESDTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGST 429
+ RN + + V+AS + +T+L ++V T Q W+K ED+ + L FA +VALW S
Sbjct: 43 LTRNPSSISLMVKASGESSDSSTDL-DVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASL 101
Query: 428 GLISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILG 267
LI+AIDKLP+ FELVGI ++ WF Y+ ++FKPDR+ + + VK + +ILG
Sbjct: 102 NLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 95 bits (234), Expect = 6e-020
Identities = 52/166 (31%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Frame = -2
Query: 749 SLSISSSSTIINSRASPTRQASFSSPSCISLPMLPPKPFQSTSY---CRKIARNVLTKAT 579
++S+++SS S A + S C ++P LPP+ F +S+ + ++ N L K
Sbjct: 2 AISVAASS----SMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVE 57
Query: 578 EVEASATA-ESDTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGSTGLISAIDKL 402
++ A++ E+ + + E++ +E W+ +E+K + A+VA+W S+ ++ AI+ +
Sbjct: 58 LLKTRASSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSV 117
Query: 401 PLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILGS 264
PL P V ELVG+GYTGWFVY+ ++FK R+ + + ++ + I GS
Sbjct: 118 PLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 94 bits (232), Expect = 1e-019
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = -2
Query: 608 IARNVLTKATEVEASATAESDTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALVALWGST 429
+ RN + + V+AS + +T+L ++V T Q W+K ED+ + L FA +VALW S
Sbjct: 43 LTRNPSSISLMVKASGESSDSSTDL-DVVSTIQN-WDKSEDRLGLIGLGFAGIVALWASL 100
Query: 428 GLISAIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILG 267
LI+AIDKLP+ FELVGI ++ WF Y+ ++FKPDR+ + + VK + +ILG
Sbjct: 101 NLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 154
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 69 bits (166), Expect = 4e-012
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = -2
Query: 575 VEASATAESDTTELPEIVKTAQEAWEKVED-------KYAIGSLAFAALVALWGSTGLIS 417
V +A ++ +E P+ +A E + D Y+I A+VAL+ ++ ++S
Sbjct: 80 VVVAAEEKNSNSEAPQAEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVS 139
Query: 416 AIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILGSNS 258
+++ +PLFP + E+VG+GYT WF + ++FK +RE + KV + + +LGS+S
Sbjct: 140 SLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSDS 192
>TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 172 Blast hits to 172 proteins in 28 species:
Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 127;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 128
Score = 55 bits (131), Expect = 5e-008
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -2
Query: 416 AIDKLPLFPGVFELVGIGYTGWFVYKNIIFKPDREVMFQKVKDTYRNILG 267
AIDKLP+ FELVGI ++ WF Y+ ++FKPDR+ + + VK + +ILG
Sbjct: 77 AIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 126
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,638,714,785
Number of Sequences: 33410
Number of Extensions: 10638714785
Number of Successful Extensions: 359258609
Number of sequences better than 0.0: 0
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