BLASTX 7.6.2
Query= UN20400 /QuerySize=1046
(1045 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297792579|ref|XP_002864174.1| HCF106 [Arabidopsis lyrata subs... 309 6e-082
gi|15237156|ref|NP_200057.1| Bacterial sec-independent transloca... 303 4e-080
gi|255545224|ref|XP_002513673.1| conserved hypothetical protein ... 201 2e-049
gi|118486079|gb|ABK94883.1| unknown [Populus trichocarpa] 200 4e-049
gi|224134885|ref|XP_002321929.1| predicted protein [Populus tric... 200 4e-049
gi|224122318|ref|XP_002318805.1| predicted protein [Populus tric... 196 8e-048
gi|15277532|gb|AAK93949.1|AF284760_1 HCF106 [Pisum sativum] 184 3e-044
gi|255639713|gb|ACU20150.1| unknown [Glycine max] 184 3e-044
gi|255647238|gb|ACU24087.1| unknown [Glycine max] 183 7e-044
gi|225464525|ref|XP_002270827.1| PREDICTED: hypothetical protein... 174 2e-041
gi|302143823|emb|CBI22684.3| unnamed protein product [Vitis vini... 174 2e-041
gi|162463061|ref|NP_001104973.1| HCF106C precursor protein [Zea ... 145 2e-032
gi|168029875|ref|XP_001767450.1| predicted protein [Physcomitrel... 138 2e-030
gi|115486019|ref|NP_001068153.1| Os11g0580800 [Oryza sativa Japo... 138 3e-030
gi|44662995|gb|AAS47588.1| chloroplast Hcf106-1 [Physcomitrella ... 137 3e-030
gi|223973823|gb|ACN31099.1| unknown [Zea mays] 134 3e-029
gi|162461892|ref|NP_001105878.1| high chlorophyll fluorescence10... 134 4e-029
gi|242072788|ref|XP_002446330.1| hypothetical protein SORBIDRAFT... 133 5e-029
gi|326533104|dbj|BAJ93524.1| predicted protein [Hordeum vulgare ... 131 2e-028
gi|168064804|ref|XP_001784348.1| predicted protein [Physcomitrel... 128 2e-027
>gi|297792579|ref|XP_002864174.1| HCF106 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 309 bits (790), Expect = 6e-082
Identities = 174/216 (80%), Positives = 182/216 (84%), Gaps = 20/216 (9%)
Frame = -3
Query: 878 MAMASQIIA---SSSPTITNRSHLL------PCYKTSKPYLS---SCLGSSRYSPYIGLK 735
MAMA QIIA SSSPTIT +SHL CYK SKP LS S +GSSR+SPYIGLK
Sbjct: 1 MAMAFQIIASSSSSSPTIT-KSHLFSYPPLQSCYKASKPKLSSWISLMGSSRFSPYIGLK 59
Query: 734 HMGISISPKSSNPERKRRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 555
H+GISISPKSSNPE+KRRC K M+IRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR L
Sbjct: 60 HLGISISPKSSNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 118
Query: 554 GKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTPNVYNQNRMN-----TPPPPPTSV 390
GKTLRTFQPTI+ELQDVSRDFKSTLEREIGLDEISTPNVYNQNR N PPPPP SV
Sbjct: 119 GKTLRTFQPTIKELQDVSRDFKSTLEREIGLDEISTPNVYNQNRTNLVQPPPPPPPPPSV 178
Query: 389 PSTEDPVTAASGPNDVQSPKAYTTEDYLKITEEQLK 282
PSTE PVT A+ PND QSPKAYTTEDYLKITEEQLK
Sbjct: 179 PSTEAPVT-ANDPNDSQSPKAYTTEDYLKITEEQLK 213
>gi|15237156|ref|NP_200057.1| Bacterial sec-independent translocation protein
mttA/Hcf106 [Arabidopsis thaliana]
Length = 260
Score = 303 bits (775), Expect = 4e-080
Identities = 172/214 (80%), Positives = 180/214 (84%), Gaps = 18/214 (8%)
Frame = -3
Query: 878 MAMASQIIA--SSSPTITNRSHLLPC------YKTSKPYLS---SCLGSSRYSPYIGLKH 732
MAMA QIIA SSSPTIT +SHL YK SKP LS S LGSSR+SPYIGLKH
Sbjct: 1 MAMALQIIASSSSSPTIT-KSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKH 59
Query: 731 MGISISPKSSNPERKRRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLG 552
+GISISPKSSNPE+KRRC K M+IRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LG
Sbjct: 60 LGISISPKSSNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLG 118
Query: 551 KTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTPNVYNQNRMN----TPPPPPTSVPS 384
KTLRTFQPTIRELQDVSRDFKSTLEREIGLD+ISTPNVYNQNR N PPPPP SVPS
Sbjct: 119 KTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTPNVYNQNRTNPVQPPPPPPPPSVPS 178
Query: 383 TEDPVTAASGPNDVQSPKAYTTEDYLKITEEQLK 282
TE PVT A+ PND QSPKAYT+EDYLK TEEQLK
Sbjct: 179 TEAPVT-ANDPNDSQSPKAYTSEDYLKFTEEQLK 211
>gi|255545224|ref|XP_002513673.1| conserved hypothetical protein [Ricinus
communis]
Length = 255
Score = 201 bits (509), Expect = 2e-049
Identities = 118/205 (57%), Positives = 142/205 (69%), Gaps = 7/205 (3%)
Frame = -3
Query: 881 PMAMASQIIASSSPTITNRSHLLPCYKTSKPYLSSC---LGSSRYSPYIGLKHMGISISP 711
P +++S ++ I S +K SK LSS LG + +S + GLKH+G+S+ P
Sbjct: 8 PTSLSSTSSSTRVAAIYQLSSSFSSHKNSKFSLSSWISHLGIAPFSQWSGLKHLGVSLMP 67
Query: 710 KSSNPERKRRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQ 531
K + ERKRRC K MV+ ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQ
Sbjct: 68 KFLSKERKRRC-KSMVVHASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQ 126
Query: 530 PTIRELQDVSRDFKSTLEREIGLDEIST--PNVYNQNRMNTPPPPPTSVPSTEDPVTAAS 357
PTIRELQDVSR+FK+TLEREIGLD+I + N+Y+ NR N P+S S E+ T A
Sbjct: 127 PTIRELQDVSREFKTTLEREIGLDDIPSQRENMYSSNRANI-ASAPSSPASNENSPTEAD 185
Query: 356 GPNDVQSPKAYTTEDYLKITEEQLK 282
AYT+E+YLKITEEQLK
Sbjct: 186 PNGAPSQTTAYTSEEYLKITEEQLK 210
>gi|118486079|gb|ABK94883.1| unknown [Populus trichocarpa]
Length = 259
Score = 200 bits (507), Expect = 4e-049
Identities = 126/228 (55%), Positives = 148/228 (64%), Gaps = 12/228 (5%)
Frame = -3
Query: 824 SHLLPCYKTSKPYLSSCL---GSSRYSPYIGLKHMGISISPKSSNPERKRRCSKGMVIRA 654
S +P +K + LS+ + G +S + GLKH+ IS P+ ERKRRC KG VI A
Sbjct: 30 SSFIPYHKAPQFGLSTSIALPGLGPFSQWSGLKHLDISTPPRFIRKERKRRC-KGKVIHA 88
Query: 653 SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTLER 474
SLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTI+ELQ+VSR+FKSTLER
Sbjct: 89 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIKELQEVSREFKSTLER 148
Query: 473 EIGLDEIS--TPNVYNQNRMNTPPPPPTSVPSTEDPVTAASGPNDVQSP-KAYTTEDYLK 303
EIGLDEIS T N YN NT P+S ST T A PN SP K+YT+E+YLK
Sbjct: 149 EIGLDEISNQTQNTYNSKITNT-ASTPSSAGSTNISTTVAD-PNGAPSPNKSYTSEEYLK 206
Query: 302 ITEEQLKLCL---QVKPAIKLRLNKHLLRRKQPKVHQRPHPLQDKIEN 168
ITEEQLK Q +P + QP+ + P +K+EN
Sbjct: 207 ITEEQLKASAAKQQGQPPPPAESQLEPQAQPQPQETTKAMPPPEKLEN 254
>gi|224134885|ref|XP_002321929.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 200 bits (507), Expect = 4e-049
Identities = 126/228 (55%), Positives = 148/228 (64%), Gaps = 12/228 (5%)
Frame = -3
Query: 824 SHLLPCYKTSKPYLSSCL---GSSRYSPYIGLKHMGISISPKSSNPERKRRCSKGMVIRA 654
S +P +K + LS+ + G +S + GLKH+ IS P+ ERKRRC KG VI A
Sbjct: 30 SSFIPYHKAPQFGLSTSIALPGLGPFSQWSGLKHLDISTPPRFIRKERKRRC-KGKVIHA 88
Query: 653 SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTLER 474
SLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTI+ELQ+VSR+FKSTLER
Sbjct: 89 SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIKELQEVSREFKSTLER 148
Query: 473 EIGLDEIS--TPNVYNQNRMNTPPPPPTSVPSTEDPVTAASGPNDVQSP-KAYTTEDYLK 303
EIGLDEIS T N YN NT P+S ST T A PN SP K+YT+E+YLK
Sbjct: 149 EIGLDEISNQTQNTYNSKITNT-ASTPSSAGSTNISTTVAD-PNGAPSPNKSYTSEEYLK 206
Query: 302 ITEEQLKLCL---QVKPAIKLRLNKHLLRRKQPKVHQRPHPLQDKIEN 168
ITEEQLK Q +P + QP+ + P +K+EN
Sbjct: 207 ITEEQLKASAAKQQGQPPPPAESQLEPQAQPQPQETTKAMPPPEKLEN 254
>gi|224122318|ref|XP_002318805.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 196 bits (496), Expect = 8e-048
Identities = 118/189 (62%), Positives = 134/189 (70%), Gaps = 13/189 (6%)
Frame = -3
Query: 824 SHLLPCYKTSKPYLSS-----CLGSSRYSPYIGLKHMGISISPKSSNPERKRRCSKGMVI 660
S L+P +K K LS+ CLG +S + GLKH+GIS SP ERK RC KG VI
Sbjct: 30 SPLIPYHKAPKFGLSTWIPQLCLGP--FSQWSGLKHLGISFSPNFVAKERKGRC-KGKVI 86
Query: 659 RASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTL 480
ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTI+ELQ+VSR+FKSTL
Sbjct: 87 HASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIKELQEVSREFKSTL 146
Query: 479 EREIGLDEIS--TPNVYNQNRMNTPPPPPTSVPSTEDPVTAASGPNDVQSP-KAYTTEDY 309
EREIGLDEIS T N Y+ NT P ++ + P + PN SP AYT+E+Y
Sbjct: 147 EREIGLDEISNQTQNTYSSKITNTASNPSSAGSTNISP--TVTDPNGAPSPNSAYTSEEY 204
Query: 308 LKITEEQLK 282
LKITEEQLK
Sbjct: 205 LKITEEQLK 213
>gi|15277532|gb|AAK93949.1|AF284760_1 HCF106 [Pisum sativum]
Length = 261
Score = 184 bits (465), Expect = 3e-044
Identities = 111/235 (47%), Positives = 144/235 (61%), Gaps = 23/235 (9%)
Frame = -3
Query: 878 MAMASQIIASSSPTITNRSHLLPCYKTSKPYLSSCLGSSRYSPYIGLKHMGISISPKSSN 699
+ S +++ +PT ++ H Y LG ++P+ G K +G S PK
Sbjct: 20 LGTCSMSLSTCTPTSHSKIHHFHLYS---------LGKRLFTPWNGFKQLGFSTKPKKPL 70
Query: 698 PE---RKRRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQP 528
+K RC KG V+ ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQP
Sbjct: 71 FHFIGKKGRC-KGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQP 129
Query: 527 TIRELQDVSRDFKSTLEREIGLDEISTP--NVYNQNRMNTPPPPPTSVPSTEDPVTAASG 354
TIRE+QDVSR+FKSTLEREIG+D+I+ P + Y+ N NT P P++ T + TA
Sbjct: 130 TIREIQDVSREFKSTLEREIGIDDITNPLQSTYSSNVRNT-TPTPSATEITNNSQTAVDP 188
Query: 353 PNDVQSPKAYTTEDYLKITEEQLKLCLQVKPAIKLRLNKHLLRRKQPKVHQRPHP 189
V KAY++E+YLKITEEQLK A+ + + K+ ++ Q+ P
Sbjct: 189 NGKVDESKAYSSEEYLKITEEQLK-------AVAAQQQEQTSSPKEDEIEQQIQP 236
>gi|255639713|gb|ACU20150.1| unknown [Glycine max]
Length = 238
Score = 184 bits (465), Expect = 3e-044
Identities = 111/170 (65%), Positives = 124/170 (72%), Gaps = 14/170 (8%)
Frame = -3
Query: 779 SCLGSSRYSPYIGLKHMGISISPKS-SNPERKRRCSKGMVIRASLFGVGAPEALVIGVVA 603
S LG SP+ GLKH+GIS K + +RK C KG V+ ASLFGVGAPEALVIGVVA
Sbjct: 37 SPLGRGLVSPWSGLKHLGISAKAKPLIHIDRKGGC-KGKVVYASLFGVGAPEALVIGVVA 95
Query: 602 LLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTP--NVYNQ 429
LLVFGPKGLAEVAR LGKTLRTFQPTI+ELQDVSR+FKSTLEREIGLD+ +P N YN
Sbjct: 96 LLVFGPKGLAEVARNLGKTLRTFQPTIKELQDVSREFKSTLEREIGLDDNLSPTQNTYNS 155
Query: 428 NRMNTPPPPPTSVPSTEDPVTAASGPNDVQSP-KAYTTEDYLKITEEQLK 282
N NT P +S ST D PN P KAY++E+YLKITEEQLK
Sbjct: 156 NIRNT--TPTSSSTSTVD-------PNGTPDPTKAYSSEEYLKITEEQLK 196
>gi|255647238|gb|ACU24087.1| unknown [Glycine max]
Length = 238
Score = 183 bits (462), Expect = 7e-044
Identities = 110/170 (64%), Positives = 124/170 (72%), Gaps = 14/170 (8%)
Frame = -3
Query: 779 SCLGSSRYSPYIGLKHMGISISPKS-SNPERKRRCSKGMVIRASLFGVGAPEALVIGVVA 603
S LG SP+ GLKH+GIS K + +RK C KG V+ ASLFGVGAPEALVIGVVA
Sbjct: 37 SPLGRGLVSPWSGLKHLGISAKAKPLIHIDRKGGC-KGKVVYASLFGVGAPEALVIGVVA 95
Query: 602 LLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTP--NVYNQ 429
LLVFGPKGLAEVAR LGKTLRTFQPTI+ELQDVS++FKSTLEREIGLD+ +P N YN
Sbjct: 96 LLVFGPKGLAEVARNLGKTLRTFQPTIKELQDVSKEFKSTLEREIGLDDNLSPTQNTYNS 155
Query: 428 NRMNTPPPPPTSVPSTEDPVTAASGPNDVQSP-KAYTTEDYLKITEEQLK 282
N NT P +S ST D PN P KAY++E+YLKITEEQLK
Sbjct: 156 NIRNT--TPTSSSTSTVD-------PNGTPDPTKAYSSEEYLKITEEQLK 196
>gi|225464525|ref|XP_002270827.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 261
Score = 174 bits (441), Expect = 2e-041
Identities = 100/166 (60%), Positives = 118/166 (71%), Gaps = 5/166 (3%)
Frame = -3
Query: 770 GSSRYSPYIGLKHMGISISPKSSNPERKRRCSKGMVIRASLFGVGAPEALVIGVVALLVF 591
G +S + GL+H+GIS+ KS R+ RC KG V+ ASLFGVGAPEALVIGVVALLVF
Sbjct: 53 GLGPFSSWNGLRHLGISVKQKSLKIGRRGRC-KGKVVYASLFGVGAPEALVIGVVALLVF 111
Query: 590 GPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEIST--PNVYNQNRMN 417
GPKGLAEVAR LGKTLR FQPTI+ELQ+VS++FKSTLE+EIG DEIS+ + Y N
Sbjct: 112 GPKGLAEVARNLGKTLREFQPTIKELQEVSKEFKSTLEKEIGFDEISSSIQDTYRPRTTN 171
Query: 416 TPPPPPTSVPSTEDPVTAASGPNDVQS-PKAYTTEDYLKITEEQLK 282
P+S ED PN S KAY++E+YLKITEEQLK
Sbjct: 172 PTTSTPSSNAGIEDSGNVVD-PNGAPSLNKAYSSEEYLKITEEQLK 216
>gi|302143823|emb|CBI22684.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 174 bits (441), Expect = 2e-041
Identities = 100/166 (60%), Positives = 118/166 (71%), Gaps = 5/166 (3%)
Frame = -3
Query: 770 GSSRYSPYIGLKHMGISISPKSSNPERKRRCSKGMVIRASLFGVGAPEALVIGVVALLVF 591
G +S + GL+H+GIS+ KS R+ RC KG V+ ASLFGVGAPEALVIGVVALLVF
Sbjct: 49 GLGPFSSWNGLRHLGISVKQKSLKIGRRGRC-KGKVVYASLFGVGAPEALVIGVVALLVF 107
Query: 590 GPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEIST--PNVYNQNRMN 417
GPKGLAEVAR LGKTLR FQPTI+ELQ+VS++FKSTLE+EIG DEIS+ + Y N
Sbjct: 108 GPKGLAEVARNLGKTLREFQPTIKELQEVSKEFKSTLEKEIGFDEISSSIQDTYRPRTTN 167
Query: 416 TPPPPPTSVPSTEDPVTAASGPNDVQS-PKAYTTEDYLKITEEQLK 282
P+S ED PN S KAY++E+YLKITEEQLK
Sbjct: 168 PTTSTPSSNAGIEDSGNVVD-PNGAPSLNKAYSSEEYLKITEEQLK 212
>gi|162463061|ref|NP_001104973.1| HCF106C precursor protein [Zea mays]
Length = 238
Score = 145 bits (364), Expect = 2e-032
Identities = 79/133 (59%), Positives = 93/133 (69%), Gaps = 13/133 (9%)
Frame = -3
Query: 683 RCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDV 504
R + VI ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRE+QDV
Sbjct: 57 RTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREIQDV 116
Query: 503 SRDFKSTLEREIGLDEISTPNVYNQNRMNTPPPPPTSVPSTEDPVTAASGPNDVQSPKAY 324
SR+F+STLEREIG+DE+S Y MN P A+ N +P Y
Sbjct: 117 SREFRSTLEREIGIDEVSQSTNYTPTTMNNNQQP-------------AADSNIKPAPAPY 163
Query: 323 TTEDYLKITEEQL 285
T+++ +K+TEEQ+
Sbjct: 164 TSDELVKVTEEQI 176
>gi|168029875|ref|XP_001767450.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 307
Score = 138 bits (346), Expect = 2e-030
Identities = 73/131 (55%), Positives = 91/131 (69%), Gaps = 6/131 (4%)
Frame = -3
Query: 662 IRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKST 483
++ASL GVGAPEALVIGVVALLVFGPKGLAEVARTLGK+LR FQPTI+ELQ VS +FK+T
Sbjct: 106 VQASLLGVGAPEALVIGVVALLVFGPKGLAEVARTLGKSLRAFQPTIKELQQVSNEFKAT 165
Query: 482 LEREIGLDEISTPNVYNQNRMNTPPPPPT------SVPSTEDPVTAASGPNDVQSPKAYT 321
LE+EIGLDE+ P+ Y+ +TP P + S+P T A + Y
Sbjct: 166 LEQEIGLDEMRNPSSYDYPPTSTPSRPSSDSSIRISIPPTLSATEAPKSEEASVQAQPYV 225
Query: 320 TEDYLKITEEQ 288
+DY++I E+Q
Sbjct: 226 ADDYVRIKEDQ 236
>gi|115486019|ref|NP_001068153.1| Os11g0580800 [Oryza sativa Japonica Group]
Length = 247
Score = 138 bits (345), Expect = 3e-030
Identities = 73/108 (67%), Positives = 80/108 (74%)
Frame = -3
Query: 686 RRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQD 507
+R S+G + ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRELQD
Sbjct: 67 KRTSRGTGVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQD 126
Query: 506 VSRDFKSTLEREIGLDEISTPNVYNQNRMNTPPPPPTSVPSTEDPVTA 363
VSR+F+STLEREIGLDE+ Y MN P S + P A
Sbjct: 127 VSREFRSTLEREIGLDEVPPSMNYRPPTMNNSQQPAIDQSSDDKPEAA 174
>gi|44662995|gb|AAS47588.1| chloroplast Hcf106-1 [Physcomitrella patens]
Length = 307
Score = 137 bits (344), Expect = 3e-030
Identities = 73/131 (55%), Positives = 91/131 (69%), Gaps = 6/131 (4%)
Frame = -3
Query: 662 IRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSRDFKST 483
++ASL GVGAPEALVIGVVALLVFGPKGLAEVARTLGK+LR FQPTI+ELQ VS +FK+T
Sbjct: 106 VQASLLGVGAPEALVIGVVALLVFGPKGLAEVARTLGKSLRAFQPTIKELQQVSNEFKAT 165
Query: 482 LEREIGLDEISTPNVYNQNRMNTPPPPPT------SVPSTEDPVTAASGPNDVQSPKAYT 321
LE+EIGLDE+ P+ Y+ +TP P + S+P T A + Y
Sbjct: 166 LEQEIGLDEMRNPSSYDYPPTSTPCXPSSDSSIRISIPPTLSATEAPKSEEASVQAQPYV 225
Query: 320 TEDYLKITEEQ 288
+DY++I E+Q
Sbjct: 226 ADDYVRIKEDQ 236
>gi|223973823|gb|ACN31099.1| unknown [Zea mays]
Length = 238
Score = 134 bits (336), Expect = 3e-029
Identities = 70/96 (72%), Positives = 76/96 (79%)
Frame = -3
Query: 683 RCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDV 504
R + VI ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRE+QDV
Sbjct: 57 RTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREIQDV 116
Query: 503 SRDFKSTLEREIGLDEISTPNVYNQNRMNTPPPPPT 396
SR+F+STLEREIG+DE+S Y MN P T
Sbjct: 117 SREFRSTLEREIGIDEVSQSTNYTPTTMNNNQQPAT 152
>gi|162461892|ref|NP_001105878.1| high chlorophyll fluorescence106 [Zea mays]
Length = 243
Score = 134 bits (335), Expect = 4e-029
Identities = 72/109 (66%), Positives = 78/109 (71%)
Frame = -3
Query: 683 RCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDV 504
R + VI ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRELQDV
Sbjct: 59 RTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDV 118
Query: 503 SRDFKSTLEREIGLDEISTPNVYNQNRMNTPPPPPTSVPSTEDPVTAAS 357
SR+F+STLEREIG+DE+S Y MN P +P S
Sbjct: 119 SREFRSTLEREIGIDEVSQSTNYRPTTMNNNQQPAADPNVKPEPAPYTS 167
>gi|242072788|ref|XP_002446330.1| hypothetical protein SORBIDRAFT_06g014410
[Sorghum bicolor]
Length = 244
Score = 133 bits (334), Expect = 5e-029
Identities = 72/109 (66%), Positives = 78/109 (71%)
Frame = -3
Query: 683 RCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDV 504
R + VI ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LGKTLR FQPTIRE+QDV
Sbjct: 58 RTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREIQDV 117
Query: 503 SRDFKSTLEREIGLDEISTPNVYNQNRMNTPPPPPTSVPSTEDPVTAAS 357
SR+F+STLEREIG+DEIS Y MN P +P S
Sbjct: 118 SREFRSTLEREIGIDEISQSTNYKPTTMNNNQQPAADPNVKPEPAPYTS 166
>gi|326533104|dbj|BAJ93524.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 252
Score = 131 bits (329), Expect = 2e-028
Identities = 75/114 (65%), Positives = 81/114 (71%), Gaps = 6/114 (5%)
Frame = -3
Query: 692 RKRRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIREL 513
++RR G I ASLFGVGAPEALVIGVVALLVFGPKGLAE AR+LGKTLR FQPTIREL
Sbjct: 65 KRRRRRNG--IHASLFGVGAPEALVIGVVALLVFGPKGLAEAARSLGKTLRAFQPTIREL 122
Query: 512 QDVSRDFKSTLEREIGLDEISTPNVY----NQNRMNTPPPPPTSVPSTEDPVTA 363
QDVSRDFK+TLEREIGLDE Y + N P P P T P T+
Sbjct: 123 QDVSRDFKNTLEREIGLDEDPPSMSYRPPPSMNNSQQPAVDPDVKPETTVPYTS 176
>gi|168064804|ref|XP_001784348.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 289
Score = 128 bits (321), Expect = 2e-027
Identities = 70/114 (61%), Positives = 85/114 (74%), Gaps = 6/114 (5%)
Frame = -3
Query: 677 SKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQDVSR 498
+K ++ASL GVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLR FQP I+ELQ+VSR
Sbjct: 87 TKNTGVQASLLGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRGFQPAIKELQEVSR 146
Query: 497 DFKSTLEREIGLDEISTPNVYNQNRMNTPPPPP-----TSVPSTEDPVTAASGP 351
+FK+TLE+EIGLDE+ + Y+ ++P PP +SV ST + A P
Sbjct: 147 EFKATLEQEIGLDELRNTS-YDSPPTSSPSRPPSSTSASSVSSTPSTIAATEAP 199
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,397,426,451,486
Number of Sequences: 15229318
Number of Extensions: 2397426451486
Number of Successful Extensions: 609866771
Number of sequences better than 0.0: 0
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