BLASTX 7.6.2

Query= UN20400 /QuerySize=1046
        (1045 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton mo...    303   1e-082
TAIR9_protein||AT5G28750.1 | Symbols:  | thylakoid assembly prot...     54   2e-007

>TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton motive force
        dependent protein transmembrane transporter | chr5:21286896-21288613
        FORWARD

          Length = 261

 Score =  303 bits (775), Expect = 1e-082
 Identities = 172/214 (80%), Positives = 180/214 (84%), Gaps = 18/214 (8%)
 Frame = -3

Query: 878 MAMASQIIA--SSSPTITNRSHLLPC------YKTSKPYLS---SCLGSSRYSPYIGLKH 732
           MAMA QIIA  SSSPTIT +SHL         YK SKP LS   S LGSSR+SPYIGLKH
Sbjct:   1 MAMALQIIASSSSSPTIT-KSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKH 59

Query: 731 MGISISPKSSNPERKRRCSKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTLG 552
           +GISISPKSSNPE+KRRC K M+IRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR LG
Sbjct:  60 LGISISPKSSNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLG 118

Query: 551 KTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTPNVYNQNRMN----TPPPPPTSVPS 384
           KTLRTFQPTIRELQDVSRDFKSTLEREIGLD+ISTPNVYNQNR N     PPPPP SVPS
Sbjct: 119 KTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTPNVYNQNRTNPVQPPPPPPPPSVPS 178

Query: 383 TEDPVTAASGPNDVQSPKAYTTEDYLKITEEQLK 282
           TE PVT A+ PND QSPKAYT+EDYLK TEEQLK
Sbjct: 179 TEAPVT-ANDPNDSQSPKAYTSEDYLKFTEEQLK 211

>TAIR9_protein||AT5G28750.1 | Symbols:  | thylakoid assembly protein, putative |
        chr5:10784142-10785677 REVERSE

          Length = 148

 Score =  54 bits (127), Expect = 2e-007
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = -3

Query: 653 SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQ 510
           +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ   +E +
Sbjct:  62 ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFE 109

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,638,714,785
Number of Sequences: 33410
Number of Extensions: 10638714785
Number of Successful Extensions: 359258609
Number of sequences better than 0.0: 0