BLASTX 7.6.2
Query= UN20472 /QuerySize=1533
(1532 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q96524|CRY2_ARATH Cryptochrome-2 OS=Arabidopsis thaliana GN=C... 634 5e-181
sp|P40115|CRY1_SINAL Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2... 550 2e-155
sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=C... 367 1e-100
sp|Q55081|PHR_SYNY3 Deoxyribodipyrimidine photo-lyase OS=Synecho... 151 2e-035
sp|Q9KNA8|PHR_VIBCH Deoxyribodipyrimidine photo-lyase OS=Vibrio ... 138 2e-031
sp|P27526|PHR_NEUCR Deoxyribodipyrimidine photo-lyase OS=Neurosp... 134 2e-030
sp|P05327|PHR_SYNP6 Deoxyribodipyrimidine photo-lyase OS=Synecho... 132 6e-030
sp|P12768|PHR_STRGR Deoxyribodipyrimidine photo-lyase OS=Strepto... 131 1e-029
sp|P61497|PHR_THET8 Deoxyribodipyrimidine photo-lyase OS=Thermus... 124 2e-027
sp|P61496|PHR_THET2 Deoxyribodipyrimidine photo-lyase OS=Thermus... 123 4e-027
sp|Q9HQ46|PHR_HALSA Deoxyribodipyrimidine photo-lyase OS=Halobac... 120 3e-026
sp|P00914|PHR_ECOLI Deoxyribodipyrimidine photo-lyase OS=Escheri... 118 2e-025
sp|P25078|PHR_SALTY Deoxyribodipyrimidine photo-lyase OS=Salmone... 117 3e-025
sp|Q04449|PHR_BACPE Deoxyribodipyrimidine photo-lyase OS=Bacillu... 115 1e-024
sp|P57386|PHR_BUCAI Deoxyribodipyrimidine photo-lyase OS=Buchner... 112 1e-023
sp|Q89AJ9|PHR_BUCBP Deoxyribodipyrimidine photo-lyase OS=Buchner... 110 3e-023
sp|P05066|PHR_YEAST Deoxyribodipyrimidine photo-lyase, mitochond... 110 4e-023
sp|P77967|CRYD_SYNY3 Cryptochrome DASH OS=Synechocystis sp. (str... 103 4e-021
sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus ... 96 5e-019
sp|Q7UJB1|CRYD_RHOBA Cryptochrome DASH OS=Rhodopirellula baltica... 95 1e-018
>sp|Q96524|CRY2_ARATH Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2
Length = 612
Score = 634 bits (1635), Expect = 5e-181
Identities = 318/371 (85%), Positives = 330/371 (88%), Gaps = 7/371 (1%)
Frame = +2
Query: 2 ENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG 181
ENEAEKPSNALLTRAWSPGWSNADK+LNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG
Sbjct: 195 ENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG 254
Query: 182 EISVRRVFQCARMKQIIWVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLS 361
EISVR VFQCARMKQIIW RDK EGEESADLFLRGIGLR+YSRYICFNFPFTHEQSLLS
Sbjct: 255 EISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFPFTHEQSLLS 314
Query: 362 HLRFFPWDADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW 541
HLRFFPWDADV+KFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW
Sbjct: 315 HLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW 374
Query: 542 KWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE-EST*AMA 718
KWGMKYFWDTLLDADLECDI+GWQYISGS+PDGHELDRLDNPA+QGAKYDPE E
Sbjct: 375 KWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDPEGEYIRQWL 434
Query: 719 TRAGEVAN*MDPSSMGRSFNVLKASGVELGTNYAKPIVDIDTARELLTKAISRTREAQIM 898
+ VLKASGVELGTNYAKPIVDIDTARELL KAISRTREAQIM
Sbjct: 435 PELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAISRTREAQIM 494
Query: 899 IGAAPDEIVADSFEALEAANTVKEHGLCP--SSNDQQVPSDIRYNGSKRMKPVEEEEEEE 1072
IGAAPDEIVADSFEAL ANT+KE GLCP SSNDQQVPS +RYNGSKR+KP EEEEE
Sbjct: 495 IGAAPDEIVADSFEAL-GANTIKEPGLCPSVSSNDQQVPSAVRYNGSKRVKP---EEEEE 550
Query: 1073 REMKKLRGFNE 1105
R+MKK RGF+E
Sbjct: 551 RDMKKSRGFDE 561
>sp|P40115|CRY1_SINAL Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1
Length = 501
Score = 550 bits (1415), Expect = 2e-155
Identities = 273/308 (88%), Positives = 276/308 (89%), Gaps = 1/308 (0%)
Frame = +2
Query: 2 ENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG 181
ENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG
Sbjct: 194 ENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG 253
Query: 182 EISVRRVFQCARMKQIIWVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLS 361
EISVRRVFQCARMKQIIW RDK GEGEESADLFLRGIGLRDYSR ICFNFPFTHEQSLLS
Sbjct: 254 EISVRRVFQCARMKQIIWARDKNGEGEESADLFLRGIGLRDYSRIICFNFPFTHEQSLLS 313
Query: 362 HLRFFPWDADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW 541
HLRFFPWDADV+KFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW
Sbjct: 314 HLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW 373
Query: 542 KWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE-EST*AMA 718
KWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE E
Sbjct: 374 KWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPEGEYIRQWL 433
Query: 719 TRAGEVAN*MDPSSMGRSFNVLKASGVELGTNYAKPIVDIDTARELLTKAISRTREAQIM 898
+ VLKASGVELGTNYAKPIV IDTARELLTKAISRTREAQIM
Sbjct: 434 PELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVVIDTARELLTKAISRTREAQIM 493
Query: 899 IGAAPDEI 922
IGA DE+
Sbjct: 494 IGACGDEM 501
>sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=1
Length = 681
Score = 367 bits (941), Expect = 1e-100
Identities = 179/322 (55%), Positives = 225/322 (69%), Gaps = 5/322 (1%)
Frame = +2
Query: 2 ENEAEKPSNALLTRAWSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFG 181
E+++EK SNALL RAWSPGWSN DK L FI L++Y+KN +K +TS LSP+LHFG
Sbjct: 198 EDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFG 257
Query: 182 EISVRRVFQCARMKQIIWVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLS 361
E+SVR+VF R+KQ+ W + GEES +LFL+ IGLR+YSRYI FN P++HE+ LL
Sbjct: 258 EVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLG 317
Query: 362 HLRFFPWDADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPW 541
HL+FFPW D FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF VK L LPW
Sbjct: 318 HLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPW 377
Query: 542 KWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE-EST*AMA 718
+WGMKYFWDTLLDADLE D +GWQYI+G+LPD E DR+DNP +G K+DP E
Sbjct: 378 RWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWL 437
Query: 719 TRAGEVAN*MDPSSMGRSFNVLKASGVELGTNYAKPIVDIDTARELLTKAISRTREAQIM 898
+ +VL+A+G+ELG+NY PIV +D A+ L +A+S+ + +
Sbjct: 438 PELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMWQLEAA 497
Query: 899 IGAA----PDEIVADSFEALEA 952
AA +E + DS E EA
Sbjct: 498 SRAAIENGSEEGLGDSAEVEEA 519
>sp|Q55081|PHR_SYNY3 Deoxyribodipyrimidine photo-lyase OS=Synechocystis sp.
(strain PCC 6803) GN=phrA PE=1 SV=1
Length = 488
Score = 151 bits (380), Expect = 2e-035
Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Frame = +2
Query: 50 SPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQI 229
+PG A++ L+ F+ L +Y +N + TS LS L FG IS R ++Q
Sbjct: 221 TPGEEAAEQRLDWFVAHGLEEYQQNRNFPALDGTSQLSAALKFGVISPRTLWQTTLE--- 277
Query: 230 IWVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFKA 409
W + + E S + + + + R++ ++ ++FP + S + FPW+ + + F+A
Sbjct: 278 AWEQSRSEEARASIETWQQELAWREFYQHCLYSFPALAQGPYRSPFQEFPWEENQDHFQA 337
Query: 410 WRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADL 589
W +GRTGYP++DA M +L TGWMHNR R+IV+SF +K L+L W+WG YF TL D DL
Sbjct: 338 WCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVASFLIKDLILNWQWGELYFMQTLYDGDL 397
Query: 590 ECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPEEST*AMATRAGEVAN*MDPSSMGR 769
+ GWQ+ + S D L R+ NP Q K+DPE + T ++A G
Sbjct: 398 AANNGGWQWSASSGMDPKPL-RIFNPHTQAQKFDPEGE--YIRTWLPQLAR----FDTGD 450
Query: 770 SFNVLKASGVELGTNYAKPIVD 835
G NY +PIVD
Sbjct: 451 LLTGKLTPGSRRSVNYPEPIVD 472
>sp|Q9KNA8|PHR_VIBCH Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae
GN=phrA PE=1 SV=1
Length = 469
Score = 138 bits (345), Expect = 2e-031
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Frame = +2
Query: 47 WSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQ 226
W+ + L +F +++ DY + TS LSPYL G +S R QC
Sbjct: 202 WAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSLSPYLAIGVLSAR---QCVAR-- 256
Query: 227 IIWVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDA------ 388
++ GE E A ++L + R++ +++ E +L F W A
Sbjct: 257 -LYHESSMGELSEGAQVWLSELIWREFYQHL-----VAIEPNLSKSRDFVEWGARLEWWN 310
Query: 389 DVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWD 568
D EKF+ W +G+TGYP+VDA MR+L TGWMHNR+R+IV+SF K L + W+WG +YF
Sbjct: 311 DNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHIDWRWGERYFMS 370
Query: 569 TLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDP 694
L+D D + GWQ+ + + DG R+ NP QG K+DP
Sbjct: 371 RLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
>sp|P27526|PHR_NEUCR Deoxyribodipyrimidine photo-lyase OS=Neurospora crassa
GN=phr-1 PE=3 SV=1
Length = 642
Score = 134 bits (336), Expect = 2e-030
Identities = 92/293 (31%), Positives = 137/293 (46%), Gaps = 29/293 (9%)
Frame = +2
Query: 47 WSPGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQ 226
W G A K L +F ++ + YA+ TS LS + G +S R + AR +
Sbjct: 357 WPAGEHEALKRLEKFCDEAIGKYAERRNIPAMQGTSNLSVHFASGTLSARTAIRTARDRN 416
Query: 227 IIWVRDKKGEGEESADLFLRGIGLRDYSR-------YICFNFPFTHEQSLLSHLRFFPWD 385
K G E ++ + RD+ + Y+C N PF S + W
Sbjct: 417 ---NTKKLNGGNEGIQRWISEVAWRDFYKHVLVHWPYVCMNKPFKPTYSNIE------WS 467
Query: 386 ADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFW 565
+V+ F AW QGRTG+P++DA MR++ +TG+MHNR+R+IV+SF K LL+ W+ G +YF
Sbjct: 468 YNVDHFHAWTQGRTGFPIIDAAMRQVLSTGYMHNRLRMIVASFLAKDLLVDWRMGERYFM 527
Query: 566 DTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDP---------EEST*AMA 718
+ L+D D + GW + + D R+ NP +Q K+DP EE
Sbjct: 528 EHLIDGDFASNNGGWGFAASVGVDPQPYFRVFNPLLQSEKFDPDGDYIRKWVEELRDLPE 587
Query: 719 TRAGEVAN*MDPSSMGRSFNVLKASGVELGTNYAKPIVDIDTARELLTKAISR 877
+ G+ DP GR +K E G Y +PIV+ AR+ A R
Sbjct: 588 LKGGKGGEIHDP--YGRGSEKVKKKLEEKG--YPRPIVEHSGARDRALDAYKR 636
>sp|P05327|PHR_SYNP6 Deoxyribodipyrimidine photo-lyase OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=phr PE=1 SV=4
Length = 484
Score = 132 bits (332), Expect = 6e-030
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 4/213 (1%)
Frame = +2
Query: 53 PGWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQII 232
PG + A L EF ++ + DY TS LSP L FG I +R+ ++ A +
Sbjct: 208 PGETAAIARLQEFCDRAIADYDPQRNFPAEAGTSGLSPALKFGAIGIRQAWRAASAAHAL 267
Query: 233 WVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFKAW 412
+ E S ++ + + R++ ++ ++FP + S + FPW+ F AW
Sbjct: 268 ---SRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREALFTAW 324
Query: 413 RQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLE 592
Q +TGYP+VDA MR+L TGWMHNR +IV+SF K L++ W+ G ++F L+D DL
Sbjct: 325 TQAQTGYPIVDAAMRQLTETGWMHNRCWMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLA 384
Query: 593 CDIIGWQYISGSLPDGHELDRLDNPAIQGAKYD 691
+ GWQ+ + S D L R+ NPA Q K+D
Sbjct: 385 ANNGGWQWSASSGMDPKPL-RIFNPASQAKKFD 416
>sp|P12768|PHR_STRGR Deoxyribodipyrimidine photo-lyase OS=Streptomyces griseus
GN=phr PE=3 SV=1
Length = 455
Score = 131 bits (329), Expect = 1e-029
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 21/260 (8%)
Frame = +2
Query: 74 KILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKG 253
K++ ++ + DY + G++TS LSP+LHFG +S + A R+K G
Sbjct: 206 KLVTSWLNGPMADYEDGHDDLAGDATSRLSPHLHFGTVSAAELVHRA--------REKGG 257
Query: 254 EGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGY 433
G E+ F+R + RD+ + + P R W +D ++ AW+ G TGY
Sbjct: 258 LGGEA---FVRQLAWRDFHHQVLADRPDASWSDY--RPRHDRWRSDADEMHAWKSGLTGY 312
Query: 434 PLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQ 613
PLVDA MR+L GWMHNR R++ +SF K L + W+ G ++F D L+D D+ + + WQ
Sbjct: 313 PLVDAAMRQLAHEGWMHNRARMLAASFLTKTLYVDWREGARHFLDLLVDGDVANNQLNWQ 372
Query: 614 YISGSLPDGHELDRLDNPAIQGAKYDPEEST*AMATRAGEVAN*MDPSSMGRSFNVLKAS 793
+++G+ D +R+ NP IQG ++D + E+A ++ S++ + K
Sbjct: 373 WVAGTGTDTRP-NRVLNPVIQGKRFDARGD--YVRGWVPELAE-VEGSAIHEPW---KLQ 425
Query: 794 GVE-LGTNYAKPIVDIDTAR 850
G++ G +Y P+VD+ AR
Sbjct: 426 GLDRAGLDYPDPVVDLAEAR 445
>sp|P61497|PHR_THET8 Deoxyribodipyrimidine photo-lyase OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=phr PE=1 SV=1
Length = 420
Score = 124 bits (310), Expect = 2e-027
Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Frame = +2
Query: 233 WVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFKAW 412
W +++ G E A ++ + RD+S ++ ++FP+ E+ L + FPW D F+AW
Sbjct: 228 WEAERR--GGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQAFPWQEDEALFQAW 285
Query: 413 RQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLE 592
+G+TG PLVDA MREL ATG++ NR R+ + FAVK LLLPWK + F LLD D
Sbjct: 286 YEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRA 345
Query: 593 CDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE 697
++ GWQ+ G D R+ NP +QG ++DPE
Sbjct: 346 VNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPE 380
>sp|P61496|PHR_THET2 Deoxyribodipyrimidine photo-lyase OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=phr PE=1 SV=1
Length = 420
Score = 123 bits (308), Expect = 4e-027
Identities = 64/155 (41%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +2
Query: 233 WVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFKAW 412
W +++ G E A ++ + RD+S ++ ++FP+ E+ L + PW D F+AW
Sbjct: 228 WEAERR--GGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQALPWQEDEALFRAW 285
Query: 413 RQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLE 592
+GRTG PLVDA MREL ATG++ NR R+ + FAVK LLLPWK + F LLD D
Sbjct: 286 YEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRA 345
Query: 593 CDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE 697
++ GWQ+ G D R+ NP +QG ++DPE
Sbjct: 346 VNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPE 380
>sp|Q9HQ46|PHR_HALSA Deoxyribodipyrimidine photo-lyase OS=Halobacterium
salinarium GN=phr PE=3 SV=2
Length = 481
Score = 120 bits (300), Expect = 3e-026
Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Frame = +2
Query: 149 TSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEGEESADLFLRGIGLRD-YSRYICF 325
TS LSP+L FG I +R V++ AR + D + E+ F+ + R+ Y++ + F
Sbjct: 240 TSRLSPHLKFGTIGIRTVYEAARAAKSDADTD---DERENVAAFIGQLAWREFYAQVLYF 296
Query: 326 NFPFTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIV 505
N E + ++ W D +AW+ G TGYP+VDAGMR+L A +MHNR+R+IV
Sbjct: 297 NQNVVSE-NFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIV 355
Query: 506 SSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAK 685
++F K LL+ W+ G +F + L D D D GWQ+ + + D R+ NP QG +
Sbjct: 356 AAFLTKDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGER 415
Query: 686 YDPE 697
YDP+
Sbjct: 416 YDPD 419
>sp|P00914|PHR_ECOLI Deoxyribodipyrimidine photo-lyase OS=Escherichia coli
(strain K12) GN=phrB PE=1 SV=1
Length = 472
Score = 118 bits (294), Expect = 2e-025
Identities = 72/212 (33%), Positives = 114/212 (53%), Gaps = 17/212 (8%)
Frame = +2
Query: 80 LNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEG 259
L +F + +Y + TS LS L G +S R QC + +++ + + +G
Sbjct: 212 LRQFCQNGAGEYEQQRDFPAVEGTSRLSASLATGGLSPR---QC--LHRLLAEQPQALDG 266
Query: 260 EESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVE------KFKAWRQG 421
+ ++L + R++ R++ T+ SL H F W V+ +AW++G
Sbjct: 267 -GAGSVWLNELIWREFYRHL-----ITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEG 320
Query: 422 RTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDI 601
+TGYP+VDA MR+L +TGWMHNR+R+I +SF VK LL+ W+ G +YF L+D DL +
Sbjct: 321 KTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANN 380
Query: 602 IGWQYISGSLPDGHELDRLDNPAIQGAKYDPE 697
GWQ+ + + D R+ NP QG K+D E
Sbjct: 381 GGWQWAASTGTDAAPYFRIFNPTTQGEKFDHE 412
>sp|P25078|PHR_SALTY Deoxyribodipyrimidine photo-lyase OS=Salmonella typhimurium
GN=phrB PE=1 SV=2
Length = 473
Score = 117 bits (291), Expect = 3e-025
Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 7/205 (3%)
Frame = +2
Query: 80 LNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEG 259
L +F + +YA + TS LS L G +S R QC + +++ + + +G
Sbjct: 213 LRQFCAQGADEYALRRDFPAVDGTSRLSASLATGGLSPR---QC--LHRLLAEQPQALDG 267
Query: 260 EESADLFLRGIGLRDYSRYICFNFP-FTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGYP 436
+ ++L + R++ R++ +P Q + + W + F+AW++G TGYP
Sbjct: 268 GPGS-VWLNELIWREFYRHLMTWYPALCKHQPFIRWTKRVAWQENPHYFQAWQKGETGYP 326
Query: 437 LVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQY 616
+VDA MR+L ATGWMHNR+R+I +SF VK LL+ W+ G +YF L+D DL + GWQ+
Sbjct: 327 IVDAAMRQLNATGWMHNRLRMITASFLVKDLLIDWRLGERYFMSQLIDGDLAANNGGWQW 386
Query: 617 ISGSLPDGHELDRLDNPAIQGAKYD 691
+ + D R+ NP QG ++D
Sbjct: 387 AASTGTDAAPYFRIFNPTTQGERFD 411
>sp|Q04449|PHR_BACPE Deoxyribodipyrimidine photo-lyase OS=Bacillus pseudofirmus
(strain OF4) GN=phr PE=3 SV=2
Length = 479
Score = 115 bits (287), Expect = 1e-024
Identities = 54/142 (38%), Positives = 83/142 (58%)
Frame = +2
Query: 266 SADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGYPLVD 445
SA+ FL+ + RD+ R + F P ++ ++ R W D + +W++G TG+P+VD
Sbjct: 271 SAETFLKELAWRDFYRMVHFYEPDCKDREIMEGYRELNWSHDQDDLTSWKRGETGFPIVD 330
Query: 446 AGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISG 625
AGMR+L GWMHNR+R+I +SF K LL+ W+ G +YF L+D D +I GWQ+ +
Sbjct: 331 AGMRQLLNEGWMHNRLRMITASFLTKDLLIDWRLGERYFERMLIDYDPSSNIGGWQWAAS 390
Query: 626 SLPDGHELDRLDNPAIQGAKYD 691
D R+ NP Q ++D
Sbjct: 391 VGTDAVPYFRIFNPVTQSKRFD 412
>sp|P57386|PHR_BUCAI Deoxyribodipyrimidine photo-lyase OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum GN=phrB PE=3 SV=1
Length = 483
Score = 112 bits (278), Expect = 1e-023
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Frame = +2
Query: 56 GWSNADKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIW 235
G A L F + DY ++TS+LSPYL G IS R +K ++
Sbjct: 206 GEKEAINRLKNFCIYKFNDYFLKRDYPFLDATSMLSPYLSAGIISSRYC-----LKVLLK 260
Query: 236 VRDKKGEGEESADLFLRGIGLRDYSRYICFNFP-FTHEQSLLSHLRFFPWDADVEKFKAW 412
++ + I R++ ++ FP + +SL++ + W +++ F AW
Sbjct: 261 TKNSLPLNVLLTSPWFDQILWREFYYHLLIGFPKISRSESLVTWEKEIHWINNIKHFNAW 320
Query: 413 RQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLE 592
++G TG+P++DAGMR+L GWMHNR+R+I SSF VK LL+ W+ G ++F L+D DL
Sbjct: 321 KEGNTGFPIIDAGMRQLNELGWMHNRLRMITSSFLVKNLLINWREGEEHFISNLIDGDLA 380
Query: 593 CDIIGWQYISGSLPDGHELDRLDNPAIQGAKYD 691
+ GWQ+ + D R+ NP Q +D
Sbjct: 381 LNNGGWQWSASVGCDSVPYIRIFNPLHQSKTFD 413
>sp|Q89AJ9|PHR_BUCBP Deoxyribodipyrimidine photo-lyase OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=phrB PE=3 SV=1
Length = 478
Score = 110 bits (274), Expect = 3e-023
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Frame = +2
Query: 143 NSTSLLSPYLHFGEISVRRVFQCARM--KQIIWVRDKKGEGEESADLFLRGIGLRDYSRY 316
NSTS+LS +L G IS R QC + K+ + K E + ++ + R++ ++
Sbjct: 237 NSTSMLSAHLSIGVISPR---QCVTLLFKEYPDIIHKLEECK-----WINELLWREFYQH 288
Query: 317 ICFNFP-FTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGYPLVDAGMRELWATGWMHNRI 493
+ + +P QSL WD ++ W+QG TGYP++DAGMR+L GW+ NR+
Sbjct: 289 LLYFYPNIGQNQSLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLKQLGWISNRL 348
Query: 494 RVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAI 673
R+I +SF VK LL+ W+ G +YF L+D D + WQ+I+ D R+ NP +
Sbjct: 349 RMITASFLVKNLLIDWRKGEEYFMSQLIDGDFASNNGNWQWIASVGTDSMPYFRIFNPML 408
Query: 674 QGAKYD 691
Q K+D
Sbjct: 409 QSKKFD 414
>sp|P05066|PHR_YEAST Deoxyribodipyrimidine photo-lyase, mitochondrial
OS=Saccharomyces cerevisiae GN=PHR1 PE=1 SV=1
Length = 565
Score = 110 bits (273), Expect = 4e-023
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Frame = +2
Query: 80 LNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEG 259
L +F+ + Y + TS LS Y+ G IS R + A + K +
Sbjct: 315 LKDFLGTKSSKYNNEKDMLYLGGTSGLSVYITTGRISTRLIVNQAFQSCNGQIMSKALKD 374
Query: 260 EESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRF----FPWDADVEKFKAWRQGRT 427
S F++ + RD+ R+ N+P+T S+ R W+ + F+ W G T
Sbjct: 375 NSSTQNFIKEVAWRDFYRHCMCNWPYT---SMGMPYRLDTLDIKWENNPVAFEKWCTGNT 431
Query: 428 GYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIG 607
G P+VDA MR+L TG+++NR R+I +SF K LL+ W+WG ++F L+D D ++ G
Sbjct: 432 GIPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGG 491
Query: 608 WQYISGSLPDGHELDRLDNPAIQGAKYDPE 697
W + S + D R+ N IQ KYDP+
Sbjct: 492 WGFCSSTGIDAQPYFRVFNMDIQAKKYDPQ 521
>sp|P77967|CRYD_SYNY3 Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803)
GN=cry PE=1 SV=2
Length = 489
Score = 103 bits (256), Expect = 4e-021
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 19/262 (7%)
Frame = +2
Query: 101 QLIDYAKNSKKVVG-NSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEGEESADL 277
+L DY + +VG + +S SP+L G +S R ++Q + +++ +S
Sbjct: 232 RLKDYKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKR------YEQERVSNDSTHW 285
Query: 278 FLRGIGLRDYSRYIC--FNFPFTHEQSLLSHLRFFPWDADVEKFKAWRQGRTGYPLVDAG 451
+ + RD+ R++ + + LL+ + FPW D +F+ WR G+TGYPLVDA
Sbjct: 286 LIFELLWRDFFRFVAQKYGNKLFNRGGLLN--KNFPWQEDQVRFELWRSGQTGYPLVDAN 343
Query: 452 MRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSL 631
MREL TG+M NR R V+SF K L + W+WG ++F L+D D+ + W Y +G
Sbjct: 344 MRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIG 403
Query: 632 PDGHELDRLDNPAIQGAKYDPEEST*AMATRAGEVAN*MDPSSMGR----SFNVLKASGV 799
D + R N Q +YDP+ + + E+ N + + + S K GV
Sbjct: 404 NDARDF-RYFNIPKQSQQYDPQGT--YLRHWLPELKN-LPGDKIHQPWLLSATEQKQWGV 459
Query: 800 ELGTNYAKPIVDIDTARELLTK 865
+LG +Y +P V+ + E K
Sbjct: 460 QLGVDYPRPCVNFHQSVEARRK 481
>sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3
SV=1
Length = 500
Score = 96 bits (238), Expect = 5e-019
Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 24/260 (9%)
Frame = +2
Query: 89 FIEKQLIDYAKNSKK--VVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWVRDKKGEGE 262
F +K L+ K ++ + + +S S +L G +S R + + Q+ K+ + +
Sbjct: 225 FWQKSLLKSYKQTRNGMLGADYSSKFSAWLALGCLSARYIHE-----QVQTYETKRIKND 279
Query: 263 ESADLFLRGIGLRDYSRYICFNFPFTHEQSLL--SHLR--FFPWDADVEKFKAWRQGRTG 430
+ L + RDY R+I H L + LR PW D E+F+ WR G+TG
Sbjct: 280 STYWLIFE-LLWRDYFRFIAAK----HGDRLFYTAGLRGLDIPWKEDWERFELWRTGQTG 334
Query: 431 YPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGW 610
+PLVDA MREL ATG+M NR R V+SF K L + W G ++F L+D D+ + W
Sbjct: 335 FPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVASNWGNW 394
Query: 611 QYISGSLPDGHELDRLDNPAIQGAKYDPEEST*AMATRAGEVAN*MDPSSMGRSFNVL-- 784
Y +G D R N Q YDP+ + + E+A + P+ + + +L
Sbjct: 395 NYTAGVGNDARGF-RFFNILKQARDYDPDGA--YVKHWLPELAG-LPPARVHEPWKLLPV 450
Query: 785 --KASGVELGTNYAKPIVDI 838
K GV LG +Y +P+VD+
Sbjct: 451 EQKRFGVRLGVDYPQPVVDL 470
>sp|Q7UJB1|CRYD_RHOBA Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3
SV=2
Length = 488
Score = 95 bits (234), Expect = 1e-018
Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 16/273 (5%)
Frame = +2
Query: 56 GWSNADKILNEFI--EKQLIDYAKNSKKVV-GNSTSLLSPYLHFGEISVRRVFQCARMKQ 226
G + A + + E+I E +L Y + ++ N +S SP+L G +S R + R +
Sbjct: 212 GQNAAQQRMEEYIWNEDRLRVYKETRNGMLHPNDSSKFSPWLAQGCLSPRMIADHVRRYE 271
Query: 227 IIWVRDKKGEGEESADLFLRGIGLRDYSRYICFNFPFTHEQSLLSHLRFFPWDADVEKFK 406
V++K S + + RDY R+I T ++ W +D E F+
Sbjct: 272 EERVKNK------STYWMIFELLWRDYFRWISRKHGATLFRAGGLRGVNVDWKSDRELFR 325
Query: 407 AWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDAD 586
W+ G TGYPLVDA MREL TG+M NR R V+SF K L + W+WG ++F L+D D
Sbjct: 326 RWQDGTTGYPLVDANMRELRTTGYMSNRGRQNVASFLTKNLGIDWRWGARWFESQLVDYD 385
Query: 587 LECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPE---EST*AMATRAGEVAN*MDPS 757
+ + W Y +G D R N Q YD + R +V +P
Sbjct: 386 VASNYGNWNYAAGVGNDARGF-RFFNITKQSRDYDSQGEYAKHWLPELRDLDVTEIHEPW 444
Query: 758 SMGRSFNVLKASGVELGTNYAKPIVDI-DTARE 853
M S + G LG Y PIVD+ D+A+E
Sbjct: 445 KM--SPERQQEVGATLGKEYPHPIVDLFDSAKE 475
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,959,508,338
Number of Sequences: 518415
Number of Extensions: 83959508338
Number of Successful Extensions: 579439005
Number of sequences better than 0.0: 0
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