BLASTX 7.6.2
Query= UN20557 /QuerySize=916
(915 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54190.1 | Symbols: | FUNCTIONS IN: molecular... 382 2e-106
TAIR9_protein||AT2G38630.1 | Symbols: | FUNCTIONS IN: molecular... 356 2e-098
>TAIR9_protein||AT3G54190.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT2G38630.1); Has 77
Blast hits to 77 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink). | chr3:20061759-20063880 REVERSE
Length = 468
Score = 382 bits (981), Expect = 2e-106
Identities = 196/217 (90%), Positives = 202/217 (93%), Gaps = 4/217 (1%)
Frame = +1
Query: 178 MEGRRITASPRPCSGRRRVAVAAKKRPRPDGFVSSVKKLQRREISSRKDRAFSISTAQER 357
MEGRRITASPRPCSGRR + AKKR RPDGFV+SVKKLQRREISSRKDRAFSISTAQER
Sbjct: 1 MEGRRITASPRPCSGRR---IVAKKRSRPDGFVNSVKKLQRREISSRKDRAFSISTAQER 57
Query: 358 FRNMRLVEQYDTHDPKGHCLVALPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETNT 537
FRNMRLVEQYDTHDPKGHCLVALPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRE+N
Sbjct: 58 FRNMRLVEQYDTHDPKGHCLVALPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRESNK 117
Query: 538 RVCFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYILRGQPDAGFAL 717
R+CFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYILRGQPDAGFAL
Sbjct: 118 RICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYILRGQPDAGFAL 177
Query: 718 FESESLKWPGFVEFDDVNGKFLRI-LRGTVCTSFDLK 825
FESESLKWPGFVEFDDVNGK L + +V FDLK
Sbjct: 178 FESESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLK 214
>TAIR9_protein||AT2G38630.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G54190.1); Has 79 Blast hits to 77 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
53; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
chr2:16154283-16156302 REVERSE
Length = 468
Score = 356 bits (912), Expect = 2e-098
Identities = 187/238 (78%), Positives = 204/238 (85%), Gaps = 5/238 (2%)
Frame = +1
Query: 175 IMEGRRITASPRPCSGRRRVAVAAKKRPRPDGFVSSVKKLQRREISSRKDRAFSISTAQE 354
+MEGRRI A+PRPCSG RR V AKKR RPDGFV+SVKKLQRREISSR DRAFSISTAQE
Sbjct: 1 MMEGRRIIANPRPCSGSRR--VIAKKRSRPDGFVNSVKKLQRREISSRMDRAFSISTAQE 58
Query: 355 RFRNMRLVEQYDTHDPKGHCLVALPFLMKRTKVIEIVAARDIVFALAHSGVCAAFSRETN 534
RFRNMRLVEQYDTHDPKG+CLV+LP L+KR+KVIEIVAARDIVFAL SGVCA+FSRETN
Sbjct: 59 RFRNMRLVEQYDTHDPKGYCLVSLPNLLKRSKVIEIVAARDIVFALTLSGVCASFSRETN 118
Query: 535 TRVCFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNFSSLKCRSTRIEYILRGQPDAGFA 714
+VCFLNVSPDEVIRSLFYNKNNDSLITVSVYASDN+SSLKCRSTRIEYILRGQ DAGF
Sbjct: 119 KKVCFLNVSPDEVIRSLFYNKNNDSLITVSVYASDNYSSLKCRSTRIEYILRGQADAGFP 178
Query: 715 LFESESLKWPGFVEFDDVNGKFLRI-LRGTVCTSFDLKTIPCCIRYQIKCQELNQSRI 885
LFESESLKWPGFVEFDDVNGK L + +V FDLK + Y I + + + +I
Sbjct: 179 LFESESLKWPGFVEFDDVNGKVLTYSAQDSVYKVFDLKNY--ALLYSISDKNVQEIKI 234
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,768,941,887
Number of Sequences: 33410
Number of Extensions: 10768941887
Number of Successful Extensions: 359282909
Number of sequences better than 0.0: 0
|
