BLASTX 7.6.2
Query= UN20578 /QuerySize=1434
(1433 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9MAC5|PTBP1_ARATH Polypyrimidine tract-binding protein homol... 693 8e-199
sp|Q9FGL9|PTBP2_ARATH Polypyrimidine tract-binding protein homol... 515 4e-145
sp|Q6ICX4|PTBP3_ARATH Polypyrimidine tract-binding protein homol... 158 2e-037
sp|Q29099|PTBP1_PIG Polypyrimidine tract-binding protein 1 OS=Su... 108 1e-022
sp|Q91Z31|PTBP2_MOUSE Polypyrimidine tract-binding protein 2 OS=... 106 7e-022
sp|Q66H20|PTBP2_RAT Polypyrimidine tract-binding protein 2 OS=Ra... 106 7e-022
sp|Q9UKA9|PTBP2_HUMAN Polypyrimidine tract-binding protein 2 OS=... 105 1e-021
sp|Q00438|PTBP1_RAT Polypyrimidine tract-binding protein 1 OS=Ra... 105 1e-021
sp|Q8WN55|PTBP1_BOVIN Polypyrimidine tract-binding protein 1 OS=... 104 2e-021
sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=... 104 2e-021
sp|P17225|PTBP1_MOUSE Polypyrimidine tract-binding protein 1 OS=... 103 4e-021
sp|O95758|ROD1_HUMAN Regulator of differentiation 1 OS=Homo sapi... 82 1e-014
sp|Q9Z118|ROD1_RAT Regulator of differentiation 1 OS=Rattus norv... 82 1e-014
sp|Q8BHD7|ROD1_MOUSE Regulator of differentiation 1 OS=Mus muscu... 81 2e-014
>sp|Q9MAC5|PTBP1_ARATH Polypyrimidine tract-binding protein homolog 1
OS=Arabidopsis thaliana GN=PTB PE=2 SV=1
Length = 399
Score = 693 bits (1788), Expect = 8e-199
Identities = 347/398 (87%), Positives = 369/398 (92%), Gaps = 5/398 (1%)
Frame = +3
Query: 54 SSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRSQAFVEFGE 233
S +QFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTK+NVGANR+QAFVEF +
Sbjct: 4 SGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFAD 63
Query: 234 VNQAISMVSYYASSSEPAQIRGKTVYIQYSNRNEIVNNQSPGEVPGNVLLVTFEGVESHD 413
+NQAISMVSYYASSSEPAQIRGKTVYIQYSNR+EIVNNQSPG+VPGNVLLVTFEGVESH+
Sbjct: 64 LNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVESHE 123
Query: 414 VSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLPEH 593
VSIDV+HLVFSA+GFVHKIATFEKAAGFQALVQFTDV+TA AAR+ALDGRSIP+YLL H
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAH 183
Query: 594 VGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQSN 773
VGSC+LRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGK+VE+QSN
Sbjct: 184 VGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSN 243
Query: 774 VLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEALE 953
VLL LIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTA +AKEALE
Sbjct: 244 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALE 303
Query: 954 GHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKVPGVAAASGPTDGW 1133
GHCIYDGGYCKLRL+YSRHTDLNVKAFSDKSRDYTLPDLS LV QK P V + S P GW
Sbjct: 304 GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAV-SGSAPPAGW 362
Query: 1134 HNGQVQTQYA---GSSYMYSPADPTGASPSSGHPPYYG 1238
N Q Q+QY+ GS YMY +DP GASP SG PPYYG
Sbjct: 363 QNPQAQSQYSGYGGSPYMYPSSDPNGASP-SGQPPYYG 399
>sp|Q9FGL9|PTBP2_ARATH Polypyrimidine tract-binding protein homolog 2
OS=Arabidopsis thaliana GN=At5g53180 PE=2 SV=1
Length = 429
Score = 515 bits (1325), Expect = 4e-145
Identities = 246/339 (72%), Positives = 295/339 (87%)
Frame = +3
Query: 51 MSSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRSQAFVEFG 230
+SS QFRYTQ PSKV+HLRNLPWEC EEELI+L K FG +VNTK NVGANR+QAF+EF
Sbjct: 4 VSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFE 63
Query: 231 EVNQAISMVSYYASSSEPAQIRGKTVYIQYSNRNEIVNNQSPGEVPGNVLLVTFEGVESH 410
++NQAI M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++ +V GNVLLVT EG ++
Sbjct: 64 DLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGDDAR 123
Query: 411 DVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLPE 590
VSIDV+HLVFSA+GFVHKI TFEK AG+QALVQFTD +TA AA+ ALDGRSIP+YLL E
Sbjct: 124 MVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAE 183
Query: 591 HVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQS 770
VG C+L+++YSAHTDL +KFQSHRSRDYTNPYLPV +A+D + Q A+G DGK++E +S
Sbjct: 184 TVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPES 243
Query: 771 NVLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEAL 950
NVLLA IENMQYAVT+DVLH VF+A+G VQKIA+F+KNG QALIQYSD+ TA +AKEAL
Sbjct: 244 NVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEAL 303
Query: 951 EGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPD 1067
EGHCIYDGG+CKL +TYSRHTDL++K +D+SRDYT+P+
Sbjct: 304 EGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPN 342
>sp|Q6ICX4|PTBP3_ARATH Polypyrimidine tract-binding protein homolog 3
OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1
Length = 432
Score = 158 bits (397), Expect = 2e-037
Identities = 117/375 (31%), Positives = 187/375 (49%), Gaps = 47/375 (12%)
Frame = +3
Query: 90 SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRSQAFVEFGEVNQAISMVSYYA 269
SKVVH+RN+ E E +L+ L + FG I TK + ++QA ++ +V+ A+S + ++
Sbjct: 5 SKVVHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMQDVSSAVSALQFF- 61
Query: 270 SSSEPAQIRGKTVYIQYSNRNEIV----NNQSPGEVPGNVLLVTFEGVESHDVSIDVVHL 437
++ +P IRG+ VY+Q+S+ E+ N + P +LLVT + + +++DV+H
Sbjct: 62 TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 119
Query: 438 VFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLPEHVGSCNLRM 617
VFS YGFV K+ TF+K+AGFQAL+Q+ A +ARTAL GR+I + G C L +
Sbjct: 120 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 172
Query: 618 SYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQSNV------- 776
+S +L + + + RSRDYTNP LP Q S P G G +N
Sbjct: 173 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGR--SSHPCYGDTGVAYPQMANTSAIAAAF 230
Query: 777 --------------LLALIENMQY-AVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQY 911
L+ N+ ++ D L +FS YG + +I + +N AL+Q
Sbjct: 231 GGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALVQM 289
Query: 912 SDIPTATIAKEALEGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQK 1091
D A +A L+G ++ +L + +S+H N+ +D S DY +L++
Sbjct: 290 GDGFQAELAVHFLKGAMLFGK---RLEVNFSKHP--NITPGTD-SHDYVNSNLNRFNRNA 343
Query: 1092 VPGVAAASGPTDGWH 1136
PT H
Sbjct: 344 AKNYRYCCSPTKMIH 358
>sp|Q29099|PTBP1_PIG Polypyrimidine tract-binding protein 1 OS=Sus scrofa
GN=PTBP1 PE=2 SV=1
Length = 557
Score = 108 bits (269), Expect = 1e-022
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Frame = +3
Query: 615 MSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGA----DGKRVETQSNVLL 782
+ +S H +L +++R L + G++ A A G + QS VL
Sbjct: 128 IQFSNHKELKTDSSPNQAR--AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLR 185
Query: 783 ALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEALEGHC 962
++EN+ Y VT+DVLH +FS +GTV KI F KN QAL+QY+D +A AK +L+G
Sbjct: 186 IIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQN 245
Query: 963 IYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKVPGVAAASGPTDGWHNG 1142
IY+ C LR+ +S+ T LNVK +DKSRDYT PDL G P + G
Sbjct: 246 IYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS--GDNQPSLDQTMAAAFGAPGI 302
Query: 1143 QVQTQYAGSSYMYSPADPTGASPS 1214
+ YAG+ + + A P A+ S
Sbjct: 303 MSASPYAGAGFPPTFAIPQAATVS 326
Score = 88 bits (217), Expect = 1e-016
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 9/116 (7%)
Frame = +3
Query: 408 HDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLP 587
+ V++DV+H +FS +G V KI TF K FQAL+Q+ D +A A+ +LDG++I
Sbjct: 193 YPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI------ 246
Query: 588 EHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV--NQTAMDGSMQPALGADG 749
+ C LR+ +S T LN+K+ + +SRDYT P LP NQ ++D +M A GA G
Sbjct: 247 -YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPG 301
>sp|Q91Z31|PTBP2_MOUSE Polypyrimidine tract-binding protein 2 OS=Mus musculus
GN=Ptbp2 PE=1 SV=2
Length = 531
Score = 106 bits (262), Expect = 7e-022
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Frame = +3
Query: 591 HVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQS 770
H+ + + + YS H +L ++ + QTA + + ++ QS
Sbjct: 120 HLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTA-NTPLSGTTVSESAVTPAQS 178
Query: 771 NVLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEAL 950
VL +I+NM Y VT+DVLH +FS +G V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 951 EGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKV--PGVAAA 1112
+G IY+ C LR+ +S+ +LNVK +DKSRDYT PDL GQ P +AAA
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAA 293
>sp|Q66H20|PTBP2_RAT Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus
GN=Ptbp2 PE=2 SV=1
Length = 531
Score = 106 bits (262), Expect = 7e-022
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Frame = +3
Query: 591 HVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQS 770
H+ + + + YS H +L ++ + QTA + + ++ QS
Sbjct: 120 HLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTA-NTPLSGTTVSESAVTPAQS 178
Query: 771 NVLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEAL 950
VL +I+NM Y VT+DVLH +FS +G V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 951 EGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKV--PGVAAA 1112
+G IY+ C LR+ +S+ +LNVK +DKSRDYT PDL GQ P +AAA
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAA 293
>sp|Q9UKA9|PTBP2_HUMAN Polypyrimidine tract-binding protein 2 OS=Homo sapiens
GN=PTBP2 PE=1 SV=1
Length = 531
Score = 105 bits (261), Expect = 1e-021
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Frame = +3
Query: 591 HVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKRVETQS 770
H+ + + + YS H +L ++ + QTA + + ++ QS
Sbjct: 120 HLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTA-NTPLSGTTVSESAVTPAQS 178
Query: 771 NVLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEAL 950
VL +I+NM Y VT+DVLH +FS +G V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 951 EGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKV--PGVAAA 1112
+G IY+ C LR+ +S+ +LNVK +DKSRDYT PDL GQ P +AAA
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAA 293
Score = 80 bits (195), Expect = 4e-014
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 13/110 (11%)
Frame = +3
Query: 408 HDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLP 587
+ V++DV+H +FS +G V KI TF K FQAL+Q+ D A A+ ALDG++I
Sbjct: 190 YPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNI------ 243
Query: 588 EHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPAL 737
+ C LR+ +S +LN+K+ + +SRDYT P LP G QPAL
Sbjct: 244 -YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP------SGDGQPAL 286
>sp|Q00438|PTBP1_RAT Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus
GN=Ptbp1 PE=1 SV=1
Length = 555
Score = 105 bits (260), Expect = 1e-021
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Frame = +3
Query: 615 MSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGA----DGKRVETQSNVLL 782
+ +S H +L +++R L + G++ A A G + QS VL
Sbjct: 127 IQFSNHKELKTDSSPNQAR--AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLR 184
Query: 783 ALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEALEGHC 962
++EN+ Y VT+DVLH +FS +GTV KI F KN QAL+QY+D +A AK +L+G
Sbjct: 185 IIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQN 244
Query: 963 IYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDLSQLVGQKVPGVAAASGPTDGWHNG 1142
IY+ C LR+ +S+ T LNVK +DKSRDYT PDL G P + G
Sbjct: 245 IYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS--GDSQPSLDQTMAAAFGAPGI 301
Query: 1143 QVQTQYAGS 1169
+ YAG+
Sbjct: 302 MSASPYAGA 310
Score = 86 bits (212), Expect = 5e-016
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 9/116 (7%)
Frame = +3
Query: 408 HDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLP 587
+ V++DV+H +FS +G V KI TF K FQAL+Q+ D +A A+ +LDG++I
Sbjct: 192 YPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI------ 245
Query: 588 EHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV--NQTAMDGSMQPALGADG 749
+ C LR+ +S T LN+K+ + +SRDYT P LP +Q ++D +M A GA G
Sbjct: 246 -YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAPG 300
>sp|Q8WN55|PTBP1_BOVIN Polypyrimidine tract-binding protein 1 OS=Bos taurus
GN=PTBP1 PE=2 SV=1
Length = 531
Score = 104 bits (258), Expect = 2e-021
Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 7/156 (4%)
Frame = +3
Query: 615 MSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGA----DGKRVETQSNVLL 782
+ +S H +L +++R L + G++ A A G + QS VL
Sbjct: 128 IQFSNHKELKTDSSPNQAR--AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLR 185
Query: 783 ALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEALEGHC 962
++EN+ Y VT+DVLH +FS +GTV KI F KN QAL+QY+D +A AK +L+G
Sbjct: 186 IIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQN 245
Query: 963 IYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDL 1070
IY+ C LR+ +S+ T LNVK +DKSRDYT PDL
Sbjct: 246 IYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDL 280
Score = 83 bits (203), Expect = 5e-015
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Frame = +3
Query: 408 HDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLP 587
+ V++DV+H +FS +G V KI TF K FQAL+Q+ D +A A+ +LDG++I
Sbjct: 193 YPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI------ 246
Query: 588 EHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV--NQTAMDGSMQPALG 740
+ C LR+ +S T LN+K+ + +SRDYT P LP +Q ++D +M A G
Sbjct: 247 -YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG 298
>sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=Homo sapiens
GN=PTBP1 PE=1 SV=1
Length = 531
Score = 104 bits (258), Expect = 2e-021
Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 7/156 (4%)
Frame = +3
Query: 615 MSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGA----DGKRVETQSNVLL 782
+ +S H +L +++R L + G++ A A G + QS VL
Sbjct: 128 IQFSNHKELKTDSSPNQAR--AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLR 185
Query: 783 ALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTATIAKEALEGHC 962
++EN+ Y VT+DVLH +FS +GTV KI F KN QAL+QY+D +A AK +L+G
Sbjct: 186 IIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQN 245
Query: 963 IYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDL 1070
IY+ C LR+ +S+ T LNVK +DKSRDYT PDL
Sbjct: 246 IYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDL 280
Score = 83 bits (203), Expect = 5e-015
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Frame = +3
Query: 408 HDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLP 587
+ V++DV+H +FS +G V KI TF K FQAL+Q+ D +A A+ +LDG++I
Sbjct: 193 YPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI------ 246
Query: 588 EHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV--NQTAMDGSMQPALG 740
+ C LR+ +S T LN+K+ + +SRDYT P LP +Q ++D +M A G
Sbjct: 247 -YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG 298
>sp|P17225|PTBP1_MOUSE Polypyrimidine tract-binding protein 1 OS=Mus musculus
GN=Ptbp1 PE=1 SV=2
Length = 527
Score = 103 bits (256), Expect = 4e-021
Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Frame = +3
Query: 747 GKRVETQSNVLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPT 926
G + QS VL ++EN+ Y VT+DVLH +FS +GTV KI F KN QAL+QY+D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 927 ATIAKEALEGHCIYDGGYCKLRLTYSRHTDLNVKAFSDKSRDYTLPDL 1070
A AK +L+G IY+ C LR+ +S+ T LNVK +DKSRDYT PDL
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDL 279
Score = 83 bits (203), Expect = 5e-015
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Frame = +3
Query: 408 HDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDGRSIPKYLLP 587
+ V++DV+H +FS +G V KI TF K FQAL+Q+ D +A A+ +LDG++I
Sbjct: 192 YPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI------ 245
Query: 588 EHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV--NQTAMDGSMQPALG 740
+ C LR+ +S T LN+K+ + +SRDYT P LP +Q ++D +M A G
Sbjct: 246 -YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG 297
>sp|O95758|ROD1_HUMAN Regulator of differentiation 1 OS=Homo sapiens GN=ROD1
PE=1 SV=2
Length = 552
Score = 82 bits (200), Expect = 1e-014
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 16/145 (11%)
Frame = +3
Query: 321 SNRNEIVNNQSPGEVPGNVLLVTFEGVESHDVSIDVVHLVFSAYGFVHKIATFEKAAGFQ 500
SN ++ QSP VL + E + + V+++V+H +FS +G V KI TF K FQ
Sbjct: 169 SNEGTVLPGQSP------VLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQ 221
Query: 501 ALVQFTDVDTALAARTALDGRSIPKYLLPEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYT 680
AL+Q+ D A A+ ALDG++I + C LR+ +S T LN+K+ + +SRD+T
Sbjct: 222 ALLQYADPVNAHYAKMALDGQNI-------YNACCTLRIDFSKLTSLNVKYNNDKSRDFT 274
Query: 681 NPYLPV--NQTAMDGSMQPALGADG 749
LP Q +++ M A GA G
Sbjct: 275 RLDLPTGDGQPSLEPPMAAAFGAPG 299
>sp|Q9Z118|ROD1_RAT Regulator of differentiation 1 OS=Rattus norvegicus GN=Rod1
PE=2 SV=1
Length = 523
Score = 82 bits (200), Expect = 1e-014
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 16/145 (11%)
Frame = +3
Query: 321 SNRNEIVNNQSPGEVPGNVLLVTFEGVESHDVSIDVVHLVFSAYGFVHKIATFEKAAGFQ 500
SN ++ QSP VL + E + + V+++V+H +FS +G V KI TF K FQ
Sbjct: 140 SNEGTLLPGQSP------VLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQ 192
Query: 501 ALVQFTDVDTALAARTALDGRSIPKYLLPEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYT 680
AL+Q+ D A A+ ALDG++I + C LR+ +S T LN+K+ + +SRD+T
Sbjct: 193 ALLQYADPVNAQYAKMALDGQNI-------YNACCTLRIDFSKLTSLNVKYNNDKSRDFT 245
Query: 681 NPYLPV--NQTAMDGSMQPALGADG 749
LP Q +++ M A GA G
Sbjct: 246 RLDLPTGDGQPSLEPPMAAAFGAPG 270
>sp|Q8BHD7|ROD1_MOUSE Regulator of differentiation 1 OS=Mus musculus GN=Rod1
PE=2 SV=1
Length = 523
Score = 81 bits (198), Expect = 2e-014
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Frame = +3
Query: 354 PGEVPGNVLLVTFEGVESHDVSIDVVHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTA 533
PG+ P VL + E + + V+++V+H +FS +G V KI TF K FQAL+Q+ D A
Sbjct: 147 PGQSP--VLRIIIENL-FYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNA 203
Query: 534 LAARTALDGRSIPKYLLPEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV--NQT 707
A+ ALDG++I + C LR+ +S T LN+K+ + +SRD+T LP Q
Sbjct: 204 QYAKMALDGQNI-------YNACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQP 256
Query: 708 AMDGSMQPALGADG 749
+++ M A GA G
Sbjct: 257 SLEPPMAAAFGAPG 270
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,924,390,942
Number of Sequences: 518415
Number of Extensions: 86924390942
Number of Successful Extensions: 587655121
Number of sequences better than 0.0: 0
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