BLASTX 7.6.2
Query= UN20586 /QuerySize=1059
(1058 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12530.1 | Symbols: PSF2 | PSF2 | chr3:3972604... 337 7e-093
TAIR9_protein||AT3G12530.2 | Symbols: PSF2 | PSF2 | chr3:3972604... 299 3e-081
>TAIR9_protein||AT3G12530.1 | Symbols: PSF2 | PSF2 | chr3:3972604-3973864
REVERSE
Length = 211
Score = 337 bits (864), Expect = 7e-093
Identities = 163/192 (84%), Positives = 179/192 (93%), Gaps = 1/192 (0%)
Frame = +1
Query: 172 MAGQTDPHISLFSPQEVEFMAEDEMVEIVPNMNMDPLNFIAGDYGRFVPQIPTQVPLWLA 351
MAGQTDPHISLFSPQEVEFMAEDE+VEIVPNMNM+ LNFI+GD+GRF+PQIPT+VPLWLA
Sbjct: 1 MAGQTDPHISLFSPQEVEFMAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLA 60
Query: 352 VALKRRGKCTFRPPAWLSVDNLTQVLEAEREPQSKFQPLPSGYIEIARLLFDHARDDIPD 531
VALKRRGKCTFRPP W+SVDNLTQ+LEAERE QS FQ LP Y+EIARLLFDHARDDIPD
Sbjct: 61 VALKRRGKCTFRPPGWMSVDNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPD 120
Query: 532 MYMVKSLVEDIRDVRLHKLETNLGTFGADTTAVKMNNVSAMEVNLVRPFVIRALEAFYKH 711
MYMV+SLVEDIRDVRLHKLETNLG+F T+AVK++NVSAMEVN+VRPFVIRALEAFYKH
Sbjct: 121 MYMVRSLVEDIRDVRLHKLETNLGSF-QGTSAVKISNVSAMEVNIVRPFVIRALEAFYKH 179
Query: 712 DKPERDADRDAK 747
DKPE D DRD +
Sbjct: 180 DKPEADVDRDTR 191
>TAIR9_protein||AT3G12530.2 | Symbols: PSF2 | PSF2 | chr3:3972604-3973728
REVERSE
Length = 192
Score = 299 bits (764), Expect = 3e-081
Identities = 144/173 (83%), Positives = 160/173 (92%), Gaps = 1/173 (0%)
Frame = +1
Query: 229 MAEDEMVEIVPNMNMDPLNFIAGDYGRFVPQIPTQVPLWLAVALKRRGKCTFRPPAWLSV 408
MAEDE+VEIVPNMNM+ LNFI+GD+GRF+PQIPT+VPLWLAVALKRRGKCTFRPP W+SV
Sbjct: 1 MAEDELVEIVPNMNMEQLNFISGDFGRFIPQIPTKVPLWLAVALKRRGKCTFRPPGWMSV 60
Query: 409 DNLTQVLEAEREPQSKFQPLPSGYIEIARLLFDHARDDIPDMYMVKSLVEDIRDVRLHKL 588
DNLTQ+LEAERE QS FQ LP Y+EIARLLFDHARDDIPDMYMV+SLVEDIRDVRLHKL
Sbjct: 61 DNLTQILEAERESQSTFQALPFSYVEIARLLFDHARDDIPDMYMVRSLVEDIRDVRLHKL 120
Query: 589 ETNLGTFGADTTAVKMNNVSAMEVNLVRPFVIRALEAFYKHDKPERDADRDAK 747
ETNLG+F T+AVK++NVSAMEVN+VRPFVIRALEAFYKHDKPE D DRD +
Sbjct: 121 ETNLGSF-QGTSAVKISNVSAMEVNIVRPFVIRALEAFYKHDKPEADVDRDTR 172
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,768,941,887
Number of Sequences: 33410
Number of Extensions: 10768941887
Number of Successful Extensions: 359282909
Number of sequences better than 0.0: 0
|