BLASTX 7.6.2
Query= UN20631 /QuerySize=700
(699 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76440.1 | Symbols: | FUNCTIONS IN: molecular... 265 2e-071
TAIR9_protein||AT1G76440.2 | Symbols: | FUNCTIONS IN: molecular... 265 2e-071
TAIR9_protein||AT1G76440.3 | Symbols: | FUNCTIONS IN: molecular... 265 2e-071
TAIR9_protein||AT1G20870.1 | Symbols: | LOCATED IN: cellular_co... 116 1e-026
TAIR9_protein||AT1G54850.1 | Symbols: | FUNCTIONS IN: molecular... 89 2e-018
TAIR9_protein||AT1G54840.1 | Symbols: | FUNCTIONS IN: molecular... 87 9e-018
>TAIR9_protein||AT1G76440.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock
protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone
(InterPro:IPR008978); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20870.1); Has 32 Blast hits to 32 proteins in
6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:28682371-28682999 REVERSE
Length = 144
Score = 265 bits (677), Expect = 2e-071
Identities = 128/144 (88%), Positives = 135/144 (93%)
Frame = +3
Query: 102 MNPENHQTTTTHSKVISHVFFTGTAKQGSAGPPLGLVDIGVSDIAYIFRVSLPGMAKNQD 281
MN EN+QTTTTHSKVISHVF TGTAK GS GPP+GLVDIGVS++AYIFRVSLPG+ KNQD
Sbjct: 1 MNAENNQTTTTHSKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQD 60
Query: 282 KIKCEIQREGRVCIQGVVPEIAIPSDSGCLYRMQVQQLTPPGPFSITFNLPGQVDPRLFS 461
KIKCEIQREGRVCIQGV+PEIAIPSD+GCLYRMQVQQL PPGPFSITFNLPGQVDPRLFS
Sbjct: 61 KIKCEIQREGRVCIQGVIPEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFS 120
Query: 462 PKFRPDGIFEVVVVKLGVRIPTS* 533
P FR DGIFEVVVVKLGVRIPTS*
Sbjct: 121 PNFRSDGIFEVVVVKLGVRIPTS* 144
>TAIR9_protein||AT1G76440.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock
protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone
(InterPro:IPR008978); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20870.1); Has 32 Blast hits to 32 proteins in
6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:28682371-28682999 REVERSE
Length = 144
Score = 265 bits (677), Expect = 2e-071
Identities = 128/144 (88%), Positives = 135/144 (93%)
Frame = +3
Query: 102 MNPENHQTTTTHSKVISHVFFTGTAKQGSAGPPLGLVDIGVSDIAYIFRVSLPGMAKNQD 281
MN EN+QTTTTHSKVISHVF TGTAK GS GPP+GLVDIGVS++AYIFRVSLPG+ KNQD
Sbjct: 1 MNAENNQTTTTHSKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQD 60
Query: 282 KIKCEIQREGRVCIQGVVPEIAIPSDSGCLYRMQVQQLTPPGPFSITFNLPGQVDPRLFS 461
KIKCEIQREGRVCIQGV+PEIAIPSD+GCLYRMQVQQL PPGPFSITFNLPGQVDPRLFS
Sbjct: 61 KIKCEIQREGRVCIQGVIPEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFS 120
Query: 462 PKFRPDGIFEVVVVKLGVRIPTS* 533
P FR DGIFEVVVVKLGVRIPTS*
Sbjct: 121 PNFRSDGIFEVVVVKLGVRIPTS* 144
>TAIR9_protein||AT1G76440.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heat shock
protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone
(InterPro:IPR008978); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G20870.1); Has 32 Blast hits to 32 proteins in
6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:28682371-28682999 REVERSE
Length = 144
Score = 265 bits (677), Expect = 2e-071
Identities = 128/144 (88%), Positives = 135/144 (93%)
Frame = +3
Query: 102 MNPENHQTTTTHSKVISHVFFTGTAKQGSAGPPLGLVDIGVSDIAYIFRVSLPGMAKNQD 281
MN EN+QTTTTHSKVISHVF TGTAK GS GPP+GLVDIGVS++AYIFRVSLPG+ KNQD
Sbjct: 1 MNAENNQTTTTHSKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQD 60
Query: 282 KIKCEIQREGRVCIQGVVPEIAIPSDSGCLYRMQVQQLTPPGPFSITFNLPGQVDPRLFS 461
KIKCEIQREGRVCIQGV+PEIAIPSD+GCLYRMQVQQL PPGPFSITFNLPGQVDPRLFS
Sbjct: 61 KIKCEIQREGRVCIQGVIPEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFS 120
Query: 462 PKFRPDGIFEVVVVKLGVRIPTS* 533
P FR DGIFEVVVVKLGVRIPTS*
Sbjct: 121 PNFRSDGIFEVVVVKLGVRIPTS* 144
>TAIR9_protein||AT1G20870.1 | Symbols: | LOCATED IN: cellular_component
unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth
stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone
(InterPro:IPR008978); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G54850.1); Has 48 Blast hits to 39 proteins in
11 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants -
42; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr1:7259287-7260775 REVERSE
Length = 464
Score = 116 bits (290), Expect = 1e-026
Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Frame = +3
Query: 90 RLNTMNPENHQTTTTHSKVISHVFFTGTAKQGSAGPPLGLVDIGVSDIAYIFRVSLPGMA 269
R T P + S V TGTA + + G +G+VDIGV+ +AY F+V+LPG+
Sbjct: 320 REKTDKPIPFSSEMKESDAEPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVR 379
Query: 270 KNQDKIKCEIQREGRVCIQGVVP--EIAIPSDSGCLYRMQVQQLTPPGPFSITFNLPGQV 443
K+ + CEI+ +G+V ++G E I S ++ M +++L PPGPF + FNLPG V
Sbjct: 380 KDYGEFSCEIESDGKVILEGSTTRGEKNIKRHSR-VFEMNIRKLCPPGPFKLCFNLPGPV 438
Query: 444 DPRLFSPKFRPDGIFEVVVVK 506
DPRLFSP FR DGIFE V+++
Sbjct: 439 DPRLFSPNFRSDGIFEGVIIR 459
>TAIR9_protein||AT1G54850.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20
(InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G54840.1); Has 35 Blast hits to 35 proteins in 7 species:
Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:20454440-20455994 FORWARD
Length = 207
Score = 89 bits (220), Expect = 2e-018
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Frame = +3
Query: 138 SKVISHVFFTGTAKQGSAGPPLGLVDIGVSDIAYIFRVSLPGMAKNQDKIKCEIQREGRV 317
S+ + V TG+A G G +GLVDI S+ +Y FRV+LPG+++++ + CEI+ +G++
Sbjct: 78 SQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKI 137
Query: 318 CIQGVVPEIAIPSDSGC----LYRMQVQQLTPPGPFSITFNLPGQVDPRLFSPKFRPDGI 485
I+G + C +++M Q L PPG F+I F LPG V F+ F DG+
Sbjct: 138 MIKGAT---TTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGV 194
Query: 486 FEVVVVKL 509
E VV K+
Sbjct: 195 LEGVVKKV 202
>TAIR9_protein||AT1G54840.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heat
shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone
(InterPro:IPR008978); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G54850.1); Has 44 Blast hits to 42 proteins in
10 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants -
36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:20452801-20453932 REVERSE
Length = 350
Score = 87 bits (214), Expect = 9e-018
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = +3
Query: 180 QGSAGPPLGLVDIGVSDIAYIFRVSLPGMAKNQDKIKCEIQREGRVCIQGVVPEIA-IPS 356
+ G +GL+DIG D AY+FRVSLPG+ +++ CE++ G+V ++GV
Sbjct: 233 EAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVEDNGKVLVRGVTTTGGKRVK 292
Query: 357 DSGCLYRMQVQQLTPPGPFSITFNLPGQVDPRLFSPKFRPDGIFEVVVVK 506
++ MQ + L PPG FS++F LPG V P FS F DGI E VV+K
Sbjct: 293 RYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,768,941,887
Number of Sequences: 33410
Number of Extensions: 10768941887
Number of Successful Extensions: 359282909
Number of sequences better than 0.0: 0
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