BLASTX 7.6.2
Query= UN20679 /QuerySize=1180
(1179 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15241461|ref|NP_196970.1| peptide deformylase 1B [Arabidopsis... 461 9e-128
gi|297811599|ref|XP_002873683.1| predicted protein [Arabidopsis ... 460 2e-127
gi|21553551|gb|AAM62644.1| Formylmethionine deformylase [Arabido... 460 4e-127
gi|11320966|gb|AAG33980.1|AF269165_1 peptide deformylase [Arabid... 459 5e-127
gi|194368702|pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b... 352 8e-095
gi|327200558|pdb|3M6O|A Chain A, Crystal Structure Of Arabidopsi... 351 1e-094
gi|255560876|ref|XP_002521451.1| polypeptide deformylase, putati... 349 9e-094
gi|327200562|pdb|3M6Q|A Chain A, Crystal Structure Of Arabidopsi... 348 1e-093
gi|327200563|pdb|3M6R|A Chain A, Crystal Structure Of Arabidopsi... 348 2e-093
gi|224060121|ref|XP_002300047.1| peptide deformylase [Populus tr... 332 9e-089
gi|225452422|ref|XP_002276964.1| PREDICTED: hypothetical protein... 327 2e-087
gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName: Full=Peptide deform... 325 1e-086
gi|115438779|ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japo... 289 1e-075
gi|242058133|ref|XP_002458212.1| hypothetical protein SORBIDRAFT... 287 4e-075
gi|326511653|dbj|BAJ91971.1| predicted protein [Hordeum vulgare ... 282 8e-074
gi|222618926|gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryz... 278 1e-072
gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryz... 278 1e-072
gi|222618921|gb|EEE55053.1| hypothetical protein OsJ_02752 [Oryz... 276 6e-072
gi|116787193|gb|ABK24406.1| unknown [Picea sitchensis] 265 1e-068
gi|255630300|gb|ACU15506.1| unknown [Glycine max] 233 7e-059
>gi|15241461|ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
Length = 273
Score = 461 bits (1186), Expect = 9e-128
Identities = 234/273 (85%), Positives = 249/273 (91%), Gaps = 4/273 (1%)
Frame = +2
Query: 29 NCFLQAPPLSRFLSPVFSRRATNLFAGYCQLKSTVMFSSSSSSAANRTGPLTSPVRAEVK 208
NCFLQAPPLSR L PV SRRAT L AGY +LKSTV F S+ NRT PLTS VRAEVK
Sbjct: 5 NCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST----VNRTSPLTSSVRAEVK 60
Query: 209 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTD 388
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 389 GIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 568
GIGLSAPQVG N+QLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 569 VVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
VVRPQSVKIDARDITG +FSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 749 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 847
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>gi|297811599|ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 460 bits (1183), Expect = 2e-127
Identities = 234/273 (85%), Positives = 247/273 (90%), Gaps = 4/273 (1%)
Frame = +2
Query: 29 NCFLQAPPLSRFLSPVFSRRATNLFAGYCQLKSTVMFSSSSSSAANRTGPLTSPVRAEVK 208
NCFLQAPPLSR PV SRRAT L AGY +LKSTVMF S+ NRT PL SPVRAEVK
Sbjct: 5 NCFLQAPPLSRLFLPVLSRRATTLSAGYGRLKSTVMFCST----GNRTSPLISPVRAEVK 60
Query: 209 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTD 388
RVSRKD +VASASDLQFETPL+IVEYPDPILRAK KRIGVFD+NLKNL D MFDVMYKTD
Sbjct: 61 RVSRKDVEVASASDLQFETPLRIVEYPDPILRAKNKRIGVFDQNLKNLVDAMFDVMYKTD 120
Query: 389 GIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 568
GIGLSAPQVG N+QLMVFNPAGE GEGEEIVLVNP I KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGEEIVLVNPIIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 569 VVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
VVRPQSVKIDARDITG +FSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 749 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 847
ALEKKYEEKTGLPSPE++QAR K+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERIQARHKRKAGVGFGKR 273
>gi|21553551|gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
Length = 273
Score = 460 bits (1181), Expect = 4e-127
Identities = 233/273 (85%), Positives = 248/273 (90%), Gaps = 4/273 (1%)
Frame = +2
Query: 29 NCFLQAPPLSRFLSPVFSRRATNLFAGYCQLKSTVMFSSSSSSAANRTGPLTSPVRAEVK 208
NCFLQAPPLSR L PV SRRAT L AGY +LKSTV F S+ NR PLTS VRAEVK
Sbjct: 5 NCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST----VNRNSPLTSSVRAEVK 60
Query: 209 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTD 388
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 389 GIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 568
GIGLSAPQVG N+QLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 569 VVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
VVRPQSVKIDARDITG +FSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 749 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 847
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>gi|11320966|gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis
thaliana]
Length = 273
Score = 459 bits (1180), Expect = 5e-127
Identities = 233/273 (85%), Positives = 248/273 (90%), Gaps = 4/273 (1%)
Frame = +2
Query: 29 NCFLQAPPLSRFLSPVFSRRATNLFAGYCQLKSTVMFSSSSSSAANRTGPLTSPVRAEVK 208
NCFLQAPPLSR L PV SRRAT L AGY +LKSTV F S+ NRT PLTS VRAEVK
Sbjct: 5 NCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST----VNRTSPLTSSVRAEVK 60
Query: 209 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTD 388
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 389 GIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 568
GIGLSAPQVG N+QLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 569 VVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
VVRPQSVKIDARDITG +FSISLS LPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSSLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 749 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 847
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>gi|194368702|pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal
Structure
Length = 193
Score = 352 bits (902), Expect = 8e-095
Identities = 173/193 (89%), Positives = 184/193 (95%)
Frame = +2
Query: 221 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGL 400
KDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTDGIGL
Sbjct: 1 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 60
Query: 401 SAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 580
SAPQVG N+QLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRP
Sbjct: 61 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 120
Query: 581 QSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 760
QSVKIDARDITG +FSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEK
Sbjct: 121 QSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEK 180
Query: 761 KYEEKTGLPSPEK 799
KYEEKTGLPSPE+
Sbjct: 181 KYEEKTGLPSPER 193
>gi|327200558|pdb|3M6O|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Peptide Deformylase 1b (Atpdf1b)
Length = 193
Score = 351 bits (900), Expect = 1e-094
Identities = 172/193 (89%), Positives = 184/193 (95%)
Frame = +2
Query: 269 LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNP 448
++IVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTDGIGLSAPQVG N+QLMVFNP
Sbjct: 1 MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 60
Query: 449 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFS 628
AGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRPQSVKIDARDITG +FS
Sbjct: 61 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 120
Query: 629 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQA 808
ISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEKKYEEKTGLPSPE+V+A
Sbjct: 121 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEA 180
Query: 809 RQKKKAGVGFGKR 847
RQK+KAGVGFGKR
Sbjct: 181 RQKRKAGVGFGKR 193
>gi|255560876|ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus
communis]
Length = 282
Score = 349 bits (893), Expect = 9e-094
Identities = 171/244 (70%), Positives = 203/244 (83%), Gaps = 8/244 (3%)
Frame = +2
Query: 116 QLKSTVMFSSSSSSAANRTGPLTSPVRAEVKR-VSRKDDQVASASDLQFETPLKIVEYPD 292
QL ST FSS + P + PVRA+ KR S K++++A+ +DL FE PLKIVEYPD
Sbjct: 45 QLSSTARFSSIAK-------PPSIPVRAQAKRSFSFKEEEIATPADLCFEEPLKIVEYPD 97
Query: 293 PILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGE 472
PILR K KRI FD+NLK L D MFDVMYKTDGIGLSAPQVG N+QLMVFNP GE GEGE
Sbjct: 98 PILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGE 157
Query: 473 EIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPA 652
EIVL+NP++NKYS K+VPFNEGCLSFPGIYADV+RP+SVKIDARDI GA+F+++LS LPA
Sbjct: 158 EIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPA 217
Query: 653 RIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGV 832
R+FQHEYDHLEG+LFFDRMTD+VLD+IR +L+ALEKK+E+KTG SPEK++ R+ KKA
Sbjct: 218 RVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAA 277
Query: 833 GFGK 844
GFGK
Sbjct: 278 GFGK 281
>gi|327200562|pdb|3M6Q|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Peptide Deformylase 1b (Atpdf1b) G41q Mutant In Complex With Actinonin
Length = 193
Score = 348 bits (892), Expect = 1e-093
Identities = 171/193 (88%), Positives = 183/193 (94%)
Frame = +2
Query: 269 LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNP 448
++IVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTD IGLSAPQVG N+QLMVFNP
Sbjct: 1 MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDQIGLSAPQVGLNVQLMVFNP 60
Query: 449 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFS 628
AGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRPQSVKIDARDITG +FS
Sbjct: 61 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 120
Query: 629 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQA 808
ISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEKKYEEKTGLPSPE+V+A
Sbjct: 121 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEA 180
Query: 809 RQKKKAGVGFGKR 847
RQK+KAGVGFGKR
Sbjct: 181 RQKRKAGVGFGKR 193
>gi|327200563|pdb|3M6R|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Peptide Deformylase 1b (Atpdf1b) G41m Mutant In Complex With Actinonin
Length = 193
Score = 348 bits (891), Expect = 2e-093
Identities = 171/193 (88%), Positives = 183/193 (94%)
Frame = +2
Query: 269 LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNP 448
++IVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTD IGLSAPQVG N+QLMVFNP
Sbjct: 1 MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDMIGLSAPQVGLNVQLMVFNP 60
Query: 449 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFS 628
AGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRPQSVKIDARDITG +FS
Sbjct: 61 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 120
Query: 629 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQA 808
ISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEKKYEEKTGLPSPE+V+A
Sbjct: 121 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEA 180
Query: 809 RQKKKAGVGFGKR 847
RQK+KAGVGFGKR
Sbjct: 181 RQKRKAGVGFGKR 193
>gi|224060121|ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
Length = 258
Score = 332 bits (850), Expect = 9e-089
Identities = 163/232 (70%), Positives = 192/232 (82%), Gaps = 1/232 (0%)
Frame = +2
Query: 152 SSAANRTGPLTSPVRAEVKR-VSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGV 328
SS + P + VR++ KR K DQVA+ SDL+FE PLKIVEYPDPILRAK KRI
Sbjct: 27 SSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDS 86
Query: 329 FDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKY 508
FD+NLK L D MFDVMYKTDGIGLSAPQVG N+QLMVFNPA E GEG+EIVLVNP++NKY
Sbjct: 87 FDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKY 146
Query: 509 SDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEG 688
S K V FNEGCLSFPGIYADV RP+SVKIDARDI GA+F+++LS LPAR+FQHE+DHL+G
Sbjct: 147 SKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQG 206
Query: 689 VLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 844
+LFFDRMT++VLD+IR L+ALEKKYE+KTG PSPE+++ + KK GFGK
Sbjct: 207 ILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258
>gi|225452422|ref|XP_002276964.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 275
Score = 327 bits (838), Expect = 2e-087
Identities = 159/231 (68%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
Frame = +2
Query: 155 SAANRTGPLTSPVRAEVKR-VSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVF 331
S+ANR V+ + KR S K++ +AS +DL FE PLKIVEYPDPILRAK K I F
Sbjct: 44 SSANRFRLPLMQVQVQAKRGFSFKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTF 103
Query: 332 DENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYS 511
D+NLK L D MFDVMYKTDGIGLSAPQVG N+QLMVFNP GE GEGEEIVLVNP++NKYS
Sbjct: 104 DDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYS 163
Query: 512 DKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGV 691
K+V FNEGCLSFPGIYADV RP+SVKIDARDITGA+F I+LS LPAR+FQHE+DHL+G
Sbjct: 164 KKIVLFNEGCLSFPGIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGT 223
Query: 692 LFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 844
LFFDRMT++VLD+I L+ LE+KYE++TG PSPE+++ R+++K GFGK
Sbjct: 224 LFFDRMTEEVLDSIHANLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGK 274
>gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName: Full=Peptide deformylase 1B,
chloroplastic; Short=PDF 1B; AltName: Full=Polypeptide deformylase;
Flags: Precursor
Length = 279
Score = 325 bits (831), Expect = 1e-086
Identities = 167/285 (58%), Positives = 212/285 (74%), Gaps = 14/285 (4%)
Frame = +2
Query: 11 LAMAVCNCFLQAPPLSRFLSPVFSRRATNLFAGYC----QLKSTVMFSSSSSSAANRTGP 178
+AMA + + + +RFL P+ SR ++ Y + + + FS+SS+ P
Sbjct: 1 MAMAAAS-WASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNK------P 53
Query: 179 LTSPVRAEVKRV---SRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKN 349
V A+ +RV K D++A+ +DL F PLKIVEYPDPILRAK KRI FD NLK
Sbjct: 54 PKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKK 113
Query: 350 LADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPF 529
L D MFD+MYKTDGIGLSAPQVG N+QLMVFN AGE GEGEEIVLVNP++++YS +++P+
Sbjct: 114 LVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPY 173
Query: 530 NEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRM 709
EGCLSFP I+ DV RP+SVK+DA+DI G +F ISLS LPAR+FQHE+DHL+GVLFFD+M
Sbjct: 174 EEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKM 233
Query: 710 TDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 844
TD+VLDTIRE+L ALEKKYE++TGLP+PE + R+ KKA VGFGK
Sbjct: 234 TDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGK 278
>gi|115438779|ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group]
Length = 269
Score = 289 bits (737), Expect = 1e-075
Identities = 137/208 (65%), Positives = 172/208 (82%)
Frame = +2
Query: 221 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGL 400
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 401 SAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 580
SAPQVG N+QLMVFNPAG GEGEEIVLVNP + K S +L+ + EGCLSFPGIYA+VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 581 QSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 760
+VKIDA+D+TGAK + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 182 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241
Query: 761 KYEEKTGLPSPEKVQARQKKKAGVGFGK 844
KYEE TGL SPE ++ + +K + F +
Sbjct: 242 KYEESTGLVSPESIENYKGRKDLISFSR 269
>gi|242058133|ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040
[Sorghum bicolor]
Length = 264
Score = 287 bits (732), Expect = 4e-075
Identities = 138/206 (66%), Positives = 170/206 (82%)
Frame = +2
Query: 227 DQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSA 406
+ A+A+DL+FE+PL++V+YPDPILRA+ KRI FD NL+ LAD MFDVMYKTDGIGLSA
Sbjct: 59 EDFATATDLRFESPLEVVKYPDPILRARNKRINAFDANLRALADEMFDVMYKTDGIGLSA 118
Query: 407 PQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQS 586
PQVG N+QLMVFNPAG GEGEEIVLVNP + K + +L+ F EGCLSFPGIY +V+RP+S
Sbjct: 119 PQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKSAKRLLVFEEGCLSFPGIYGNVLRPES 178
Query: 587 VKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKY 766
VKI+A+D+TGAK + LS LPAR+FQHE+DHL G+LFFDRMT DVL+T+REEL+ LEKKY
Sbjct: 179 VKIEAQDVTGAKIKVKLSGLPARVFQHEFDHLLGILFFDRMTMDVLETVREELKNLEKKY 238
Query: 767 EEKTGLPSPEKVQARQKKKAGVGFGK 844
EE+TGL SPE V+ + K F +
Sbjct: 239 EERTGLASPETVENYEGAKDVFSFSR 264
>gi|326511653|dbj|BAJ91971.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 270
Score = 282 bits (721), Expect = 8e-074
Identities = 135/208 (64%), Positives = 169/208 (81%)
Frame = +2
Query: 221 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGL 400
+DD ASA+DL+FE PLK+V+YPDP+LRA+ KRI FD NL++LAD MFDVMYKTDGIGL
Sbjct: 63 EDDDFASAADLRFEPPLKVVQYPDPVLRARNKRINTFDNNLRSLADEMFDVMYKTDGIGL 122
Query: 401 SAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 580
SAPQVG N+QLMVFNPAG GEGEEIVLVNP + K+S +L + EGCLSFPGIYA+V+RP
Sbjct: 123 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKFSKRLSVYEEGCLSFPGIYANVLRP 182
Query: 581 QSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 760
+VKIDA+D +GAK + LS L AR+FQHE+DHL+G+LFFDRMT DV+++I E+L++LE+
Sbjct: 183 DTVKIDAQDASGAKIKVKLSELSARVFQHEFDHLQGILFFDRMTMDVVESIHEQLKSLEE 242
Query: 761 KYEEKTGLPSPEKVQARQKKKAGVGFGK 844
KYEE TG SPE + + K V F +
Sbjct: 243 KYEEITGQASPETIANFRGTKDVVSFSR 270
>gi|222618926|gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryza sativa
Japonica Group]
Length = 267
Score = 278 bits (711), Expect = 1e-072
Identities = 132/188 (70%), Positives = 161/188 (85%)
Frame = +2
Query: 221 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGL 400
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 401 SAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 580
SAPQVG N+QLMVFNPAG GEGEEIVLVNP + K S +L+ + EGCLSFPGIYA+VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 581 QSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 760
+VKIDA+D+TGAK + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 182 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241
Query: 761 KYEEKTGL 784
KYEE TGL
Sbjct: 242 KYEESTGL 249
>gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryza sativa Indica
Group]
Length = 997
Score = 278 bits (710), Expect = 1e-072
Identities = 139/219 (63%), Positives = 174/219 (79%), Gaps = 6/219 (2%)
Frame = +2
Query: 143 SSSSSAANRTGPLTSPVR-----AEVKRVSRKDDQVASASDLQFETPLKIVEYPDPILRA 307
+S+ +RTG + +P+R A V +D+ A+A+DLQFE PLK+V+YPDPILRA
Sbjct: 749 ASAGLPLSRTGSV-APLRHGFGSAVVTAPPAEDEDFATAADLQFEPPLKVVKYPDPILRA 807
Query: 308 KCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLV 487
+ KRI FD+NL++L D MFDVMYKTDGIGLSAPQVG N+QLMVFNPAG GEGEEIVLV
Sbjct: 808 RNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLV 867
Query: 488 NPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQH 667
NP + K S +L+ + E CLSFPGIYA+VVRP +VKIDA+D+TGAK + LS L AR+FQH
Sbjct: 868 NPVVYKMSKRLLVYEESCLSFPGIYANVVRPDNVKIDAQDVTGAKIKVKLSGLSARVFQH 927
Query: 668 EYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGL 784
E+DHL+G+LFFDRM+ DVL+++RE L+ LEKKYEE TGL
Sbjct: 928 EFDHLQGILFFDRMSLDVLESVREGLKDLEKKYEESTGL 966
>gi|222618921|gb|EEE55053.1| hypothetical protein OsJ_02752 [Oryza sativa
Japonica Group]
Length = 260
Score = 276 bits (705), Expect = 6e-072
Identities = 131/188 (69%), Positives = 160/188 (85%)
Frame = +2
Query: 221 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGL 400
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 42 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 101
Query: 401 SAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 580
SAPQVG N+QLMVFNPAG GEGEEIVLVNP + K S +L+ + E CLSFPGIYA+VVRP
Sbjct: 102 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEESCLSFPGIYANVVRP 161
Query: 581 QSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 760
+VKIDA+D+TGAK + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 162 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 221
Query: 761 KYEEKTGL 784
KYEE TGL
Sbjct: 222 KYEESTGL 229
>gi|116787193|gb|ABK24406.1| unknown [Picea sitchensis]
Length = 290
Score = 265 bits (676), Expect = 1e-068
Identities = 129/213 (60%), Positives = 164/213 (76%)
Frame = +2
Query: 167 RTGPLTSPVRAEVKRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLK 346
R G ++ R + + + ++ AS+LQ+E PLKIV+YPD LRAK K I +FDE L+
Sbjct: 75 RMGVMSQARRGFLSELRKMKEEEDFASELQYELPLKIVKYPDSRLRAKNKPINIFDEKLQ 134
Query: 347 NLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVP 526
LAD MFD+MYKTDG+GLSAPQVG N+QLMVFNPAGESG+GEE++LVNP+I KYS +
Sbjct: 135 RLADEMFDLMYKTDGVGLSAPQVGVNVQLMVFNPAGESGKGEEVILVNPEIYKYSKRKEV 194
Query: 527 FNEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDR 706
F EGCLSFP IYADV RP SVKI+A D+ G KF +SL ARIFQHEYDHL+ +LFF+R
Sbjct: 195 FTEGCLSFPEIYADVERPMSVKIEAWDVKGKKFILSLKEFNARIFQHEYDHLQRILFFER 254
Query: 707 MTDDVLDTIREELEALEKKYEEKTGLPSPEKVQ 805
M D+L+TIR L+ LE+KYE +TG+P+PE+V+
Sbjct: 255 MHPDILETIRPALQDLEQKYEIRTGMPAPERVK 287
>gi|255630300|gb|ACU15506.1| unknown [Glycine max]
Length = 221
Score = 233 bits (592), Expect = 7e-059
Identities = 118/171 (69%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Frame = +2
Query: 176 PLTSPVRAEVKR-VSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNL 352
P T+P RA K S D VAS D +F PLKIVEYPDP LRA+ KRI FD++LK L
Sbjct: 43 PRTAPPRAMAKPCFSPAQDLVASPGDFEFVLPLKIVEYPDPRLRARNKRIVAFDDSLKKL 102
Query: 353 ADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFN 532
MFDVMYKTDGIGLSAPQ+G N+QLMVFNP GE GEGEEIVLVNP++++YS KL FN
Sbjct: 103 VHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGEHGEGEEIVLVNPRVSQYSKKLTLFN 162
Query: 533 EGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLE 685
EGCLSFPGI ADV RP+SVKIDAR I G FS++LS LPARIFQHE+DHL+
Sbjct: 163 EGCLSFPGINADVKRPESVKIDARGINGTMFSVNLSDLPARIFQHEFDHLQ 213
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,498,019,856,450
Number of Sequences: 15229318
Number of Extensions: 2498019856450
Number of Successful Extensions: 628698129
Number of sequences better than 0.0: 0
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