BLASTX 7.6.2
Query= UN20679 /QuerySize=1180
(1179 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FUZ2|DEF1B_ARATH Peptide deformylase 1B, chloroplastic OS=A... 461 4e-129
sp|Q9FV54|DEF1B_SOLLC Peptide deformylase 1B, chloroplastic OS=S... 325 6e-088
sp|Q5VNN5|DEF1B_ORYSJ Peptide deformylase 1B, chloroplastic OS=O... 289 5e-077
sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (st... 141 9e-033
sp|Q7V3K7|DEF_PROMP Peptide deformylase OS=Prochlorococcus marin... 137 2e-031
sp|Q3AHC4|DEF_SYNSC Peptide deformylase OS=Synechococcus sp. (st... 134 1e-030
sp|Q31DB4|DEF_PROM9 Peptide deformylase OS=Prochlorococcus marin... 132 4e-030
sp|A2BNK7|DEF_PROMS Peptide deformylase OS=Prochlorococcus marin... 132 6e-030
sp|A2BU25|DEF_PROM5 Peptide deformylase OS=Prochlorococcus marin... 132 7e-030
sp|Q0I7A5|DEF_SYNS3 Peptide deformylase OS=Synechococcus sp. (st... 131 1e-029
sp|Q8DIB4|DEF_THEEB Peptide deformylase OS=Thermosynechococcus e... 128 8e-029
sp|Q7VED2|DEF_PROMA Peptide deformylase OS=Prochlorococcus marin... 126 3e-028
sp|Q7U9D4|DEF_SYNPX Peptide deformylase OS=Synechococcus sp. (st... 126 3e-028
sp|Q7V5F9|DEF2_PROMM Peptide deformylase 2 OS=Prochlorococcus ma... 126 4e-028
sp|Q46HV9|DEF_PROMT Peptide deformylase OS=Prochlorococcus marin... 125 7e-028
sp|Q7NIF5|DEF2_GLOVI Peptide deformylase 2 OS=Gloeobacter violac... 125 9e-028
sp|P73441|DEF_SYNY3 Peptide deformylase OS=Synechocystis sp. (st... 125 9e-028
sp|A2BZN6|DEF_PROM1 Peptide deformylase OS=Prochlorococcus marin... 124 2e-027
sp|Q8YSK6|DEF1_ANASP Peptide deformylase 1 OS=Anabaena sp. (stra... 122 8e-027
sp|P94601|DEF_FREDI Peptide deformylase OS=Fremyella diplosiphon... 122 8e-027
>sp|Q9FUZ2|DEF1B_ARATH Peptide deformylase 1B, chloroplastic OS=Arabidopsis
thaliana GN=PDF1B PE=1 SV=2
Length = 273
Score = 461 bits (1186), Expect = 4e-129
Identities = 234/273 (85%), Positives = 249/273 (91%), Gaps = 4/273 (1%)
Frame = +2
Query: 29 NCFLQAPPLSRFLSPVFSRRATNLFAGYCQLKSTVMFSSSSSSAANRTGPLTSPVRAEVK 208
NCFLQAPPLSR L PV SRRAT L AGY +LKSTV F S+ NRT PLTS VRAEVK
Sbjct: 5 NCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST----VNRTSPLTSSVRAEVK 60
Query: 209 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTD 388
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL D MFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 389 GIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 568
GIGLSAPQVG N+QLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 569 VVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
VVRPQSVKIDARDITG +FSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 749 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 847
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>sp|Q9FV54|DEF1B_SOLLC Peptide deformylase 1B, chloroplastic OS=Solanum
lycopersicum GN=PDF1B PE=2 SV=1
Length = 279
Score = 325 bits (831), Expect = 6e-088
Identities = 167/285 (58%), Positives = 212/285 (74%), Gaps = 14/285 (4%)
Frame = +2
Query: 11 LAMAVCNCFLQAPPLSRFLSPVFSRRATNLFAGYC----QLKSTVMFSSSSSSAANRTGP 178
+AMA + + + +RFL P+ SR ++ Y + + + FS+SS+ P
Sbjct: 1 MAMAAAS-WASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNK------P 53
Query: 179 LTSPVRAEVKRV---SRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKN 349
V A+ +RV K D++A+ +DL F PLKIVEYPDPILRAK KRI FD NLK
Sbjct: 54 PKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKK 113
Query: 350 LADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPF 529
L D MFD+MYKTDGIGLSAPQVG N+QLMVFN AGE GEGEEIVLVNP++++YS +++P+
Sbjct: 114 LVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPY 173
Query: 530 NEGCLSFPGIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRM 709
EGCLSFP I+ DV RP+SVK+DA+DI G +F ISLS LPAR+FQHE+DHL+GVLFFD+M
Sbjct: 174 EEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKM 233
Query: 710 TDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 844
TD+VLDTIRE+L ALEKKYE++TGLP+PE + R+ KKA VGFGK
Sbjct: 234 TDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGK 278
>sp|Q5VNN5|DEF1B_ORYSJ Peptide deformylase 1B, chloroplastic OS=Oryza sativa
subsp. japonica GN=PDF1B PE=2 SV=1
Length = 269
Score = 289 bits (737), Expect = 5e-077
Identities = 137/208 (65%), Positives = 172/208 (82%)
Frame = +2
Query: 221 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGL 400
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 401 SAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 580
SAPQVG N+QLMVFNPAG GEGEEIVLVNP + K S +L+ + EGCLSFPGIYA+VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 581 QSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 760
+VKIDA+D+TGAK + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 182 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241
Query: 761 KYEEKTGLPSPEKVQARQKKKAGVGFGK 844
KYEE TGL SPE ++ + +K + F +
Sbjct: 242 KYEESTGLVSPESIENYKGRKDLISFSR 269
>sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=def PE=3 SV=1
Length = 187
Score = 141 bits (355), Expect = 9e-033
Identities = 66/152 (43%), Positives = 97/152 (63%)
Frame = +2
Query: 266 PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFN 445
PL++ D +LR K KRI D+ ++ LA M MY + GIGL+APQVG N +L+V +
Sbjct: 16 PLELHYLGDKVLRQKAKRIAKVDDEIRTLAKEMLQTMYSSQGIGLAAPQVGVNKRLIVID 75
Query: 446 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKF 625
E+ +VL+NP+I K+ +L PF EGCLS PG++ DV+RP +++ RD G
Sbjct: 76 TDPENPANAPLVLINPEIKKFGQQLCPFEEGCLSIPGVHLDVIRPDEIEVSYRDEQGKPK 135
Query: 626 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDV 721
I S L +R+ QHE DHL+GV+F DR+ +++
Sbjct: 136 RIKASGLLSRVIQHEIDHLDGVMFVDRVENEI 167
>sp|Q7V3K7|DEF_PROMP Peptide deformylase OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=def PE=3 SV=1
Length = 201
Score = 137 bits (343), Expect = 2e-031
Identities = 71/173 (41%), Positives = 101/173 (58%), Gaps = 1/173 (0%)
Frame = +2
Query: 197 AEVKRVSRKDDQVASASDLQFETP-LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDV 373
+++ R S+ + + S Q TP L+I + D +LR KRI D +++NLA +M
Sbjct: 6 SQLARKSKTNSPIEKVSKEQTGTPSLEIYKLGDDVLRENAKRISKVDNSIRNLAKDMLQS 65
Query: 374 MYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 553
MY GIGL+APQ+G +L+V + E E ++L+NP+I Y L + EGCLS P
Sbjct: 66 MYAAKGIGLAAPQIGIKKELLVIDVNFEDAAAEPLILINPEITDYGTTLNSYEEGCLSIP 125
Query: 554 GIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMT 712
G+Y +VVRP ++K+ RD G + L AR QHE DHL GVLF DR+T
Sbjct: 126 GVYLNVVRPSTIKLRFRDEMGRPRKMKADGLLARCIQHEMDHLNGVLFVDRVT 178
>sp|Q3AHC4|DEF_SYNSC Peptide deformylase OS=Synechococcus sp. (strain CC9605)
GN=def PE=3 SV=1
Length = 201
Score = 134 bits (336), Expect = 1e-030
Identities = 80/194 (41%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Frame = +2
Query: 197 AEVKRVSRKDDQVASASDLQFET-PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDV 373
AE+ R + K ET PL+I D +LR +RIG +E ++ LA +M
Sbjct: 6 AELARQADKSRDTMLVPKTALETPPLEIHTLGDEVLRQPARRIGKVNEQVRELARDMLRS 65
Query: 374 MYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 553
MY GIGL+APQVG + QL+V + E+ +VL+NP+I S L + EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEITAASAGLDTYEEGCLSIP 125
Query: 554 GIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTI 733
G+Y DVVRP ++++ RD G + L AR QHE DHL GVLF DR+TD D +
Sbjct: 126 GVYLDVVRPTAIELSFRDEMGRPRKMKADGLMARCIQHEMDHLNGVLFVDRVTDQ--DGL 183
Query: 734 REELEALEKKYEEK 775
++EL+ EK +E +
Sbjct: 184 QKELK--EKGFERQ 195
>sp|Q31DB4|DEF_PROM9 Peptide deformylase OS=Prochlorococcus marinus (strain MIT
9312) GN=def PE=3 SV=1
Length = 201
Score = 132 bits (332), Expect = 4e-030
Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 4/169 (2%)
Frame = +2
Query: 269 LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNP 448
L+I + D +LR KRI DE+++ L M MY GIGL+APQ+G N +L+V +
Sbjct: 31 LEIYKLGDDVLRQNSKRITKVDESIRKLTREMIQSMYAAKGIGLAAPQIGINKELLVIDV 90
Query: 449 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFS 628
E E ++L+NP+I Y L + EGCLS PG+Y +VVRP ++K+ RD G
Sbjct: 91 NFEDSAAEPLILINPEITDYGTTLNSYEEGCLSIPGVYLNVVRPSTIKLKFRDEMGRPRK 150
Query: 629 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEK 775
+ L AR QHE DHL G+LF DR+T D +++EL +++ + EK
Sbjct: 151 MKADGLLARCIQHEMDHLNGILFVDRVTSK--DDLKKEL--IKEGFHEK 195
>sp|A2BNK7|DEF_PROMS Peptide deformylase OS=Prochlorococcus marinus (strain
AS9601) GN=def PE=3 SV=1
Length = 201
Score = 132 bits (331), Expect = 6e-030
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 5/194 (2%)
Frame = +2
Query: 197 AEVKRVSRKDDQVASASDLQFETP-LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDV 373
+++ + SR + + Q P L I + D +LR KRI DE+++ LA M
Sbjct: 6 SQLAKKSRTNGNAEKIAKEQSGKPFLDIYKLGDDVLRQNSKRITKVDESIRKLAREMLQS 65
Query: 374 MYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 553
MY GIGL+APQ+G N +L+V + E E ++L+NP+I + L + EGCLS P
Sbjct: 66 MYAAKGIGLAAPQIGINKELLVIDVNFEDSAAEPLILINPEITDFGTTLNSYEEGCLSIP 125
Query: 554 GIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTI 733
G+Y +VVRP ++K+ RD G + L AR QHE DHL G+LF DR+T D +
Sbjct: 126 GVYLNVVRPSTIKLKFRDEMGRPRKMKADGLLARCIQHEMDHLNGILFVDRVTSK--DDL 183
Query: 734 REELEALEKKYEEK 775
+EL L++ + EK
Sbjct: 184 NKEL--LKEGFNEK 195
>sp|A2BU25|DEF_PROM5 Peptide deformylase OS=Prochlorococcus marinus (strain MIT
9515) GN=def PE=3 SV=1
Length = 203
Score = 132 bits (330), Expect = 7e-030
Identities = 71/184 (38%), Positives = 110/184 (59%), Gaps = 6/184 (3%)
Frame = +2
Query: 209 RVSRKDDQVASASDLQFET----PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVM 376
++++K S+S ++ E PL+I + + +LR KRIG D + +NLA +M M
Sbjct: 7 QLAKKSRNELSSSKVKKEVIENPPLEIFKLGNDVLRTNAKRIGKVDLDTRNLAKDMLKSM 66
Query: 377 YKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPG 556
Y GIGL+APQVG + +L+V + E E ++L+NP+I + + L + EGCLS PG
Sbjct: 67 YSAKGIGLAAPQVGISKELLVIDINFEDSAAEPLILINPEITAFGNTLNSYEEGCLSIPG 126
Query: 557 IYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMT--DDVLDT 730
+Y +VVRP ++K+ D G ++ L AR QHE DHL GVLF DR+T +D+
Sbjct: 127 VYLNVVRPSTIKLRFSDEMGRPRKMNADGLLARCIQHEVDHLRGVLFVDRVTSKEDLKTE 186
Query: 731 IREE 742
+++E
Sbjct: 187 LKKE 190
>sp|Q0I7A5|DEF_SYNS3 Peptide deformylase OS=Synechococcus sp. (strain CC9311)
GN=def PE=3 SV=1
Length = 202
Score = 131 bits (328), Expect = 1e-029
Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
Frame = +2
Query: 197 AEVKRVSRKDDQVASASDLQFET-PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDV 373
A++ R + K + ET PL I D LR +RIG DE +++LA +M
Sbjct: 6 AQLARSAEKSSSSIAVPKEPLETAPLDIHTLGDDALRGDARRIGKVDERVRDLARDMLRS 65
Query: 374 MYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 553
MY GIGL+APQVG + QL+V + E+ +VL+NP+I S + + EGCLS P
Sbjct: 66 MYTASGIGLAAPQVGVHQQLLVIDLDFETPSTPPLVLINPEITTCSASVDTYEEGCLSIP 125
Query: 554 GIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTD 715
G+Y DVVRP ++++ RD G ++ L AR QHE DHL GVLF DR+TD
Sbjct: 126 GVYLDVVRPTAIQLSFRDEMGRPRTMKADGLMARCIQHEMDHLRGVLFVDRVTD 179
>sp|Q8DIB4|DEF_THEEB Peptide deformylase OS=Thermosynechococcus elongatus
(strain BP-1) GN=def PE=3 SV=1
Length = 188
Score = 128 bits (321), Expect = 8e-029
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
Frame = +2
Query: 266 PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFN 445
PL++ D +LR KR+ D++++++A M MY DGIGL+APQVG N Q++V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRVSKVDDSIRDIARKMLQTMYSADGIGLAAPQVGINKQILVID 75
Query: 446 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKF 625
+ E E +V++NP I +S++L EGCLS PG+Y +V RP V++ +D G
Sbjct: 76 IHPDDPEAEPLVMINPVIKDFSEELEVCQEGCLSIPGVYLEVRRPAMVEVSYKDEWGRPQ 135
Query: 626 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
I L AR QHE DHL GV+F DR+ + L +R EL+
Sbjct: 136 VIMAGGLLARAIQHEIDHLTGVMFVDRVENQAL--LRHELK 174
>sp|Q7VED2|DEF_PROMA Peptide deformylase OS=Prochlorococcus marinus GN=def PE=3
SV=1
Length = 203
Score = 126 bits (316), Expect = 3e-028
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Frame = +2
Query: 269 LKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFNP 448
L+I + LR KRI D+N+++L M MY GIGL+APQ+G QL+V +
Sbjct: 31 LEIHTLGNSALRQSAKRISKVDKNIRDLVKKMLHSMYAAKGIGLAAPQIGSQQQLLVIDL 90
Query: 449 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKFS 628
E+ I+L+NP+I ++S + + EGCLS PG+Y DV+RP S+K++ RD G
Sbjct: 91 DIENSATPPIILINPEITEFSATIDTYEEGCLSIPGVYLDVIRPSSIKVNFRDEMGRPKK 150
Query: 629 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 748
I+ L AR QHE DHL GVLF DR ++ + + +EL+
Sbjct: 151 INADGLLARCIQHEMDHLNGVLFVDRAINE--EALNKELK 188
>sp|Q7U9D4|DEF_SYNPX Peptide deformylase OS=Synechococcus sp. (strain WH8102)
GN=def PE=3 SV=1
Length = 201
Score = 126 bits (316), Expect = 3e-028
Identities = 70/175 (40%), Positives = 98/175 (56%), Gaps = 1/175 (0%)
Frame = +2
Query: 197 AEVKRVSRKDDQVASASDLQFET-PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDV 373
A++ R + + ET PL+I +LR +RIG E + LA +M
Sbjct: 6 AQLARAAEQSRDTMLVPKTALETPPLEIHTLGAEVLRQSARRIGKVTEQTRELARDMLRS 65
Query: 374 MYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 553
MY GIGL+APQVG + QL+V + E+ +VL+NP+I+ S + + EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEISAASASIDTYEEGCLSIP 125
Query: 554 GIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 718
G+Y DVVRP ++++ RD G + L AR QHE DHL GVLF DR+TD+
Sbjct: 126 GVYLDVVRPTAIELSFRDEMGRPRKMKADGLMARCIQHEMDHLNGVLFVDRVTDE 180
>sp|Q7V5F9|DEF2_PROMM Peptide deformylase 2 OS=Prochlorococcus marinus (strain
MIT 9313) GN=def2 PE=3 SV=1
Length = 201
Score = 126 bits (315), Expect = 4e-028
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Frame = +2
Query: 197 AEVKRVSRK-DDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDV 373
A++ R + K VA + PL+I + +LR +RIG DE++++L +M
Sbjct: 6 AQLARTAEKTKGSVAVPKEPLDHPPLQIHTLGNGVLRQSTRRIGKVDESVRDLVRDMLRS 65
Query: 374 MYKTDGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 553
MY GIGL+APQVG + QL+V + E+ +VL+NP+I S + + EGCLS P
Sbjct: 66 MYAAKGIGLAAPQVGIHKQLLVLDLDLETPTTPPVVLINPEIISSSATVETYEEGCLSIP 125
Query: 554 GIYADVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 718
G+Y +VVRP + + RD G + L AR QHE DHLEGVLF DR+TD+
Sbjct: 126 GVYLNVVRPSEIVLSFRDEMGRPRKMKADGLMARCIQHEMDHLEGVLFVDRVTDE 180
>sp|Q46HV9|DEF_PROMT Peptide deformylase OS=Prochlorococcus marinus (strain
NATL2A) GN=def PE=3 SV=1
Length = 202
Score = 125 bits (313), Expect = 7e-028
Identities = 65/171 (38%), Positives = 95/171 (55%)
Frame = +2
Query: 206 KRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKT 385
K +K ++ + + PLK+ + D LR RI D+ ++ LA +M MY +
Sbjct: 10 KNAEKKKPSISVSKEPVENPPLKVYQLGDEALRTPANRIVKVDDAIRKLAKDMLITMYSS 69
Query: 386 DGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYA 565
GIGL+APQVG +L+V + E +V +NP+I S L + EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIQKRLLVIDLKFEDPNSPPMVFINPEIISSSATLDTYEEGCLSIPGVYL 129
Query: 566 DVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 718
+V+RP S+K+ RD G ++ L AR QHE DHL GV F D++TD+
Sbjct: 130 NVLRPSSIKLSYRDEMGRPKKMNADGLMARCIQHEIDHLNGVCFVDKVTDE 180
>sp|Q7NIF5|DEF2_GLOVI Peptide deformylase 2 OS=Gloeobacter violaceus GN=def2
PE=3 SV=1
Length = 187
Score = 125 bits (312), Expect = 9e-028
Identities = 65/152 (42%), Positives = 90/152 (59%)
Frame = +2
Query: 266 PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFN 445
PL I D +LR K+I ++ ++ LA M MY DGIGL+APQVG N +++V +
Sbjct: 16 PLAIHTLGDRVLRQGSKQISGINDEVRKLAQQMLQTMYSADGIGLAAPQVGVNKRMIVVD 75
Query: 446 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKF 625
E+ +VL+NP I ++S L EGCLS P IYADV RP+ V RD+ G
Sbjct: 76 IDPENAARPPLVLINPLIKQFSSDLAVDQEGCLSVPSIYADVRRPERVVATYRDLNGRPV 135
Query: 626 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDV 721
++ + L AR QHE DHL+GVLF DR+ + +
Sbjct: 136 TLEATGLLARCIQHEIDHLDGVLFVDRVENQI 167
>sp|P73441|DEF_SYNY3 Peptide deformylase OS=Synechocystis sp. (strain PCC 6803)
GN=def PE=3 SV=1
Length = 187
Score = 125 bits (312), Expect = 9e-028
Identities = 59/148 (39%), Positives = 91/148 (61%)
Frame = +2
Query: 266 PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFN 445
PL++ D +LR KRI D++++ LA M MY +GIGL+APQVG N QL+V +
Sbjct: 16 PLELHYLGDKVLRQPAKRIAKVDDSIRKLAKEMLQTMYSANGIGLAAPQVGINKQLLVVD 75
Query: 446 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKF 625
+ + ++++NP+I + S++L EGCLS P +Y DV RP+++++ +D G
Sbjct: 76 CEQDKPDEPPLIMINPQITRTSEELCVVEEGCLSVPNVYMDVTRPRAIEVTYKDEHGRPQ 135
Query: 626 SISLSRLPARIFQHEYDHLEGVLFFDRM 709
+ L AR+ QHE DHL GV+F DR+
Sbjct: 136 KRLFAELTARVIQHEMDHLNGVMFVDRV 163
>sp|A2BZN6|DEF_PROM1 Peptide deformylase OS=Prochlorococcus marinus (strain
NATL1A) GN=def PE=3 SV=1
Length = 202
Score = 124 bits (309), Expect = 2e-027
Identities = 64/171 (37%), Positives = 95/171 (55%)
Frame = +2
Query: 206 KRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKT 385
K +K ++ + + PLK+ + D LR RI D+ ++ LA +M MY +
Sbjct: 10 KNAEKKKPSISVSKEPVENPPLKVYQLGDEALRTPANRIVKVDDAIRKLAKDMLITMYSS 69
Query: 386 DGIGLSAPQVGFNIQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYA 565
GIGL+APQVG +L+V + E +V +NP+I S + + EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIQKRLLVIDLNFEDPNSPPMVFINPEIISSSATVDTYEEGCLSIPGVYL 129
Query: 566 DVVRPQSVKIDARDITGAKFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 718
+V+RP S+K+ RD G ++ L AR QHE DHL GV F D++TD+
Sbjct: 130 NVLRPSSIKLSYRDEMGRPKKMNADGLMARCIQHEIDHLNGVCFVDKVTDE 180
>sp|Q8YSK6|DEF1_ANASP Peptide deformylase 1 OS=Anabaena sp. (strain PCC 7120)
GN=def1 PE=3 SV=1
Length = 187
Score = 122 bits (304), Expect = 8e-027
Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Frame = +2
Query: 266 PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFN 445
PL++ D +LR KRI D+ + L +M MY +DGIGL+APQVG N QL+V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRITKVDDETRQLIRDMLQTMYSSDGIGLAAPQVGINKQLIVID 75
Query: 446 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKF 625
++ ++L+NP I + S ++ EGCLS PG+Y DV RP+ V++ +D G
Sbjct: 76 CEPDNPANPPLILINPTIKQVSREICSAQEGCLSIPGVYMDVKRPEVVEVAYKDENGRPQ 135
Query: 626 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREEL 745
++ + L R QHE DHL GV+F DR+ + + T+ +EL
Sbjct: 136 TLKATDLLGRCIQHEMDHLNGVVFVDRVDNSL--TLAQEL 173
>sp|P94601|DEF_FREDI Peptide deformylase OS=Fremyella diplosiphon GN=def PE=3
SV=1
Length = 187
Score = 122 bits (304), Expect = 8e-027
Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Frame = +2
Query: 266 PLKIVEYPDPILRAKCKRIGVFDENLKNLADNMFDVMYKTDGIGLSAPQVGFNIQLMVFN 445
PL++ D +LR KRI D+ L+ L +M MY DGIGL+APQVG + QL+V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRIAKVDDELRQLIRDMLQTMYSKDGIGLAAPQVGIHKQLIVID 75
Query: 446 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGAKF 625
++ +VL+NP I + S ++ EGCLS P +Y DV RP+ V+I +D G
Sbjct: 76 LEPDNPANPPLVLINPTIKQVSKEICVAQEGCLSIPNVYMDVKRPEVVEIAYKDENGRPK 135
Query: 626 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREEL 745
++ + L AR QHE DHL GV+F DR+ + + T+ +EL
Sbjct: 136 TLKATDLLARCIQHEMDHLNGVVFVDRVDNSL--TLAQEL 173
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,924,390,942
Number of Sequences: 518415
Number of Extensions: 86924390942
Number of Successful Extensions: 587655121
Number of sequences better than 0.0: 0
|
