BLASTX 7.6.2
Query= UN20744 /QuerySize=1180
(1179 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 372 4e-103
TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi... 183 2e-046
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 176 3e-044
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3... 171 1e-042
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding... 156 4e-038
TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 93 3e-019
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 88 8e-018
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 88 8e-018
TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-r... 81 1e-015
TAIR9_protein||AT2G21440.1 | Symbols: | RNA recognition motif (... 70 2e-012
TAIR9_protein||AT4G02430.2 | Symbols: | pre-mRNA splicing facto... 66 4e-011
TAIR9_protein||AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 62 5e-010
TAIR9_protein||AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 62 5e-010
TAIR9_protein||AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1;... 56 3e-008
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 52 7e-007
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 372 bits (953), Expect = 4e-103
Identities = 188/217 (86%), Positives = 192/217 (88%), Gaps = 6/217 (2%)
Frame = +2
Query: 95 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPE 271
RRYSPPYYSPPRRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRNIPLDCRPE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 272 ELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVV 451
ELR PFERFGPVRDVYIPRDYYSG+PRGFAFVEFVDAYDAGEAQRSMNRR F GREITVV
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVV 121
Query: 452 VASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSY 631
VASESRKRPEEMRVKTRTRSREPSGSR RSHGRSRSRSISRSRSPRRPSDSRSR RSRSY
Sbjct: 122 VASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSRSY 181
Query: 632 SPAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDA 742
SPAPRRRG P R +E+ S P EG A
Sbjct: 182 SPAPRRRG-----GPPRGEEDENYSRRSYSPGYEGAA 213
Score = 145 bits (364), Expect = 7e-035
Identities = 92/159 (57%), Positives = 99/159 (62%), Gaps = 20/159 (12%)
Frame = +2
Query: 482 EMRVKTRTRSRE-PSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSP------A 640
E+ V + SR+ P R ++ RSR S SR RS R SRSR SRS SP
Sbjct: 117 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGR---SRSRSISRSRSPRRPSDSR 173
Query: 641 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAAAAG-DRDTNGD 817
R R YS +PRRR PPRGE D YSRRSYSPGYEGAAAA DRD NGD
Sbjct: 174 SRYRSRSYSPAPRRR---------GGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGD 224
Query: 818 NETREKPDYEPEERRRGGREVSRSPSGSRSRSVEASPR* 934
NE REKP YE E+RRRGGR VSRSPSGSRSRSVE SPR*
Sbjct: 225 NEIREKPGYEAEDRRRGGRAVSRSPSGSRSRSVEVSPR* 263
>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE
Length = 263
Score = 183 bits (464), Expect = 2e-046
Identities = 119/264 (45%), Positives = 148/264 (56%), Gaps = 28/264 (10%)
Frame = +2
Query: 119 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFERF 298
SPP RGYG RGRSP P G GG R SLLVRN+ DCR E+LR PFE+F
Sbjct: 9 SPP-RGYGRRGRSPSP-------RGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 299 GPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRP 478
GPV+D+Y+PRDYY+G+PRGF F++F+D DA EA+ M+ + GRE+TVV A E+RK+P
Sbjct: 61 GPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKP 120
Query: 479 EEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGA 658
EM RTR R +R + RS R SRS PRR RSR RSR Y+ P +R
Sbjct: 121 TEM----RTRDRGGRSNRFQDRRRSPPR-YSRSPPPRR--GRRSRSRSRGYNSPPAKRHQ 173
Query: 659 DYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAAAAGDRDTNGDNETREKP 838
S SP+ R+ E+ RS RSPP RS SP G + R R+
Sbjct: 174 SRSVSPQDRRYEKERSYSRSPPHNGSRV----RSGSP---GRVKSHSRSPRRSVSPRKNR 226
Query: 839 DYEPEERRRGGREVSRSPSGSRSR 910
Y PE+ R S+SP +SR
Sbjct: 227 SYTPEQAR------SQSPVPRQSR 244
Score = 183 bits (464), Expect = 2e-046
Identities = 119/270 (44%), Positives = 148/270 (54%), Gaps = 28/270 (10%)
Frame = +2
Query: 146 RGRSPPPPPRRGYGGGGG--------GGGRKGSSHGSLLVRNIPLDCRPEELRVPFERFG 301
RGRS P P RGYG G GG R SLLVRN+ DCR E+LR PFE+FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFG 61
Query: 302 PVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPE 481
PV+D+Y+PRDYY+G+PRGF F++F+D DA EA+ M+ + GRE+TVV A E+RK+P
Sbjct: 62 PVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPT 121
Query: 482 EMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGAD 661
EM RTR R +R + RS R SRS PRR RSR RSR Y+ P +R
Sbjct: 122 EM----RTRDRGGRSNRFQDRRRSPPR-YSRSPPPRR--GRRSRSRSRGYNSPPAKRHQS 174
Query: 662 YSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAAAAGDRDTNGDNETREKPD 841
S SP+ R+ E+ RS RSPP RS SP G + R R+
Sbjct: 175 RSVSPQDRRYEKERSYSRSPPHNGSRV----RSGSP---GRVKSHSRSPRRSVSPRKNRS 227
Query: 842 YEPEERRRGGREVSRSPSGSRSRSVEASPR 931
Y PE+ R S+SP +SRS PR
Sbjct: 228 YTPEQAR------SQSPVPRQSRSPTPVPR 251
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 176 bits (445), Expect = 3e-044
Identities = 115/267 (43%), Positives = 143/267 (53%), Gaps = 28/267 (10%)
Frame = +2
Query: 125 PRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFERFGP 304
P RGYG RGRSP P G GGR SLLVRN+ DCR E+LR FE+FGP
Sbjct: 10 PPRGYGRRGRSPSP--------RGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGP 61
Query: 305 VRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEE 484
V+D+Y+PRDYY+G+PRGF FV+F+D DA +A+ M+ + GRE+TVV A E+RK+P E
Sbjct: 62 VKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTE 121
Query: 485 MRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADY 664
M R+RE G R R R+ R SRSRSP P RSR RS Y P RR
Sbjct: 122 M------RARERGGGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYYSPPPRRHHPR 174
Query: 665 SASPRRRQEERPRSPLRSPP------RGEGDAKYSRRSYSPGYEGAAAAGDRDTNGDNET 826
S SPR + + RS RSP R + RS SP + + R + +
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRRSISRSPRRSRSPSPK 234
Query: 827 REKPDYEPEERRRGGREVSRSPSGSRS 907
R + P R +SRSP SRS
Sbjct: 235 RNR-SVSPR------RSISRSPRRSRS 254
>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632567 FORWARD
Length = 221
Score = 171 bits (431), Expect = 1e-042
Identities = 106/226 (46%), Positives = 128/226 (56%), Gaps = 21/226 (9%)
Frame = +2
Query: 125 PRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFERFGP 304
P RGYG RGRSP P G GGR SLLVRN+ DCR E+LR FE+FGP
Sbjct: 10 PPRGYGRRGRSPSP--------RGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGP 61
Query: 305 VRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEE 484
V+D+Y+PRDYY+G+PRGF FV+F+D DA +A+ M+ + GRE+TVV A E+RK+P E
Sbjct: 62 VKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTE 121
Query: 485 MRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADY 664
M R+RE G R R R+ R SRSRSP P RSR RS Y P RR
Sbjct: 122 M------RARERGGGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYYSPPPRRHHPR 174
Query: 665 SASPRRRQEERPRSPLRSPP------RGEGDAKYSRRSYSPGYEGA 784
S SPR + + RS RSP R + RS SP E A
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPTQEEA 220
>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
binding / nucleotide binding | chr5:6268925-6271158 REVERSE
Length = 237
Score = 156 bits (392), Expect = 4e-038
Identities = 93/205 (45%), Positives = 114/205 (55%), Gaps = 9/205 (4%)
Frame = +2
Query: 131 RGYGGRGRS-PPPPPRRGYGGG-----GGGGGRKGSSHGSLLVRNIPLDCRPEELRVPFE 292
R Y R R PP R+GY + S LL+RN+PLD RP +LR FE
Sbjct: 9 RSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFE 68
Query: 293 RFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRK 472
RFGP++D+Y+PR+YY+GEPRGF FV++ A DA EA + MN +V GGREI +V A E+RK
Sbjct: 69 RFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRK 128
Query: 473 RPEEMRVKTRTRSREPSGSR-GRSHGRSRSRSISRSRS-PRRPSDSRSRRRSRSYSPAPR 646
P+EMR T R R R R RS SRSRS PRR S R YSP R
Sbjct: 129 TPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDDLYSPRRR 188
Query: 647 RRGADYSASPRRRQEERPRSPLRSP 721
R S PR +E + R+ RSP
Sbjct: 189 SRSISRSPLPRNEREYKSRN-CRSP 212
>TAIR9_protein||AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334829 FORWARD
Length = 301
Score = 93 bits (230), Expect = 3e-019
Identities = 77/218 (35%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Frame = +2
Query: 119 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGG--RKGSSHGS---LLVRNIPLDCRPEELRV 283
S R GYGG G GYGGGGGGGG R G S S ++VR +P ++L+
Sbjct: 89 SDRRGGYGGGG--------SGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKD 140
Query: 284 PFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVF---GGREITVVV 454
+ G V + RD + V++ + D A R ++ F R V
Sbjct: 141 HMRKAGDVCFAEVTRD----SDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVK 196
Query: 455 ASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRR-----PSDSRSRRR 619
ES + ++R+RSR S SRGR SRSRS+SRS+SPR+ P S SR
Sbjct: 197 KYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSI 256
Query: 620 SRSYSPAPRRRGADYSASPR--RRQEERPRSPLRSPPR 727
S+S SP+P ++ + A R R R RSP +SPP+
Sbjct: 257 SKSRSPSPDKKKSPPRAMSRSKSRSRSRSRSPSKSPPK 294
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 88 bits (217), Expect = 8e-018
Identities = 73/180 (40%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Frame = +2
Query: 206 GRKG----SSHGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEF 373
GR G S SLLV NI ++L F ++G V DV+IPRD +G+ RGFAFV +
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 374 VDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHGRS 553
+A +A ++ RV GREITV A E K R P R RS
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFAKYGPN--AEKISKGRVVEPPPKSRRSRSRSPR 122
Query: 554 RSRSISRSRSP---RRPSDSRS-RRRSRS--YSPAPRRRGADYSASPRRRQEERPRSPLR 715
RSRS RSRSP R P SRS RRRSR R+R S R R EE+ R R
Sbjct: 123 RSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDHRR 182
Score = 55 bits (130), Expect = 1e-007
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 557 SRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSPLRSPPRGEG 736
+ IS+ R P S RRSRS SP R + PRRR R RSP R
Sbjct: 98 AEKISKGRVVEPPPKS---RRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYR 154
Query: 737 DAKYSRRSYSPGYEGAAAAGDRDTNGDNETREKPDYEPEERRRGGREVSRSPSGSRSRSV 916
+ Y +RS S Y+ ++D + TR + E+RR GR + S S SRS+
Sbjct: 155 EKDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRVRGR--YDNESRSHSRSL 212
Query: 917 EASP 928
ASP
Sbjct: 213 SASP 216
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 88 bits (217), Expect = 8e-018
Identities = 73/180 (40%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Frame = +2
Query: 206 GRKG----SSHGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEF 373
GR G S SLLV NI ++L F ++G V DV+IPRD +G+ RGFAFV +
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 374 VDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHGRS 553
+A +A ++ RV GREITV A E K R P R RS
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFAKYGPN--AEKISKGRVVEPPPKSRRSRSRSPR 122
Query: 554 RSRSISRSRSP---RRPSDSRS-RRRSRS--YSPAPRRRGADYSASPRRRQEERPRSPLR 715
RSRS RSRSP R P SRS RRRSR R+R S R R EE+ R R
Sbjct: 123 RSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDHRR 182
Score = 55 bits (130), Expect = 1e-007
Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +2
Query: 557 SRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSPLRSPPRGEG 736
+ IS+ R P S RRSRS SP R + PRRR R RSP R
Sbjct: 98 AEKISKGRVVEPPPKS---RRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYR 154
Query: 737 DAKYSRRSYSPGYEGAAAAGDRDTNGDNETREKPDYEPEERRRGGREVSRSPSGSRSRSV 916
+ Y +RS S Y+ ++D + TR + E+RR GR + S S SRS+
Sbjct: 155 EKDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRVRGR--YDNESRSHSRSL 212
Query: 917 EASP 928
ASP
Sbjct: 213 SASP 216
>TAIR9_protein||AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
34a); RNA binding / nucleic acid binding / nucleotide binding |
chr3:18332668-18334617 FORWARD
Length = 298
Score = 81 bits (198), Expect = 1e-015
Identities = 67/191 (35%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Frame = +2
Query: 119 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGG--RKGSSHGS---LLVRNIPLDCRPEELRV 283
S R GYGG G GYGGGGGGGG R G S S ++VR +P ++L+
Sbjct: 89 SDRRGGYGGGG--------SGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASWQDLKD 140
Query: 284 PFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVF---GGREITVVV 454
+ G V + RD + V++ + D A R ++ F R V
Sbjct: 141 HMRKAGDVCFAEVTRD----SDGTYGVVDYTNYDDMKYAIRKLDDTEFRNPWARGFIRVK 196
Query: 455 ASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRR-----PSDSRSRRR 619
ES + ++R+RSR S SRGR SRSRS+SRS+SPR+ P S SR
Sbjct: 197 KYESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSI 256
Query: 620 SRSYSPAPRRR 652
S+S SP+P ++
Sbjct: 257 SKSRSPSPDKK 267
>TAIR9_protein||AT2G21440.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:9173712-9179065 REVERSE
Length = 1004
Score = 70 bits (170), Expect = 2e-012
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +2
Query: 197 GGGGRKGSSHGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFV 376
GG G K + L++RN+P +P +++V F G V DV+IP+++ +G P+GFAFV+F
Sbjct: 322 GGEGSK-AQKWKLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFT 380
Query: 377 DAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHGRS 553
DA A + N +FG R I V A T + + GS G S S
Sbjct: 381 CKKDAANAIKKFNGHMFGKRPIAVDWAVPKNIYNGAADATTASADGDKEGSDGDSENSS 439
Score = 56 bits (134), Expect = 3e-008
Identities = 46/167 (27%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Frame = +2
Query: 206 GRKGSSH--GSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVD 379
G + S H ++ V +P +L F GPVR ++ + S E RGFAFV+F
Sbjct: 11 GEEKSPHAAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFAL 70
Query: 380 AYDAGEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRS 559
D A N GGR ITV A+ R +E R K P S+G+S +
Sbjct: 71 QEDVNRAIELKNGSTVGGRRITVKQAAH-RPSLQERRTKAAEGISVPDNSQGQSDKDTSI 129
Query: 560 RSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERP 700
SP + R + P R++ R++ E+P
Sbjct: 130 PETDEKVSPPEKKLEKPVERKKVEKPIERKQ---VEKPVERKKAEKP 173
>TAIR9_protein||AT4G02430.2 | Symbols: | pre-mRNA splicing factor, putative /
SR1 protein, putative | chr4:1069186-1071313 FORWARD
Length = 279
Score = 66 bits (159), Expect = 4e-011
Identities = 63/175 (36%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Frame = +2
Query: 173 RRGYGGGGGGGGRKGSSHGS---LLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSG 343
R G GGG GGG +G S S ++V +P ++L+ + G V + RD
Sbjct: 99 RGGRGGGDGGGRERGPSRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRD---- 154
Query: 344 EPRG-FAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREP 520
RG V++ D A R E V +SR+ + R +R RS
Sbjct: 155 -GRGTTGIVDYTSYEDMKYALDDTEFRNAFSHEYVRVREYDSRR---DSRSPSRGRSYSK 210
Query: 521 SGSRGRSHGRSRSRSISR--SRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPR 679
S SRGRS RSRSRS SR SRSP+ S RS +S S SP R R S SPR
Sbjct: 211 SRSRGRSPSRSRSRSRSRSKSRSPKAKSLRRSPAKSTSRSPRSRSRSKSRSLSPR 265
>TAIR9_protein||AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-629583 FORWARD
Length = 304
Score = 62 bits (150), Expect = 5e-010
Identities = 44/87 (50%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +2
Query: 500 RTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPR 679
R+ S+ S SRGRS RSRSRS SRSRSP+ S RS +S S SP PR + S SP
Sbjct: 208 RSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSR--SPSP- 264
Query: 680 RRQEERPRSPLRSPPRGEGDAKYSRRS 760
RR R RSPL S + EG S+ S
Sbjct: 265 RRSRSRSRSPLPSVQK-EGSKSPSKPS 290
>TAIR9_protein||AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-629583 FORWARD
Length = 304
Score = 62 bits (150), Expect = 5e-010
Identities = 44/87 (50%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +2
Query: 500 RTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPR 679
R+ S+ S SRGRS RSRSRS SRSRSP+ S RS +S S SP PR + S SP
Sbjct: 208 RSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSR--SPSP- 264
Query: 680 RRQEERPRSPLRSPPRGEGDAKYSRRS 760
RR R RSPL S + EG S+ S
Sbjct: 265 RRSRSRSRSPLPSVQK-EGSKSPSKPS 290
>TAIR9_protein||AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
nucleic acid binding / nucleotide binding | chr1:626918-628995 FORWARD
Length = 286
Score = 56 bits (134), Expect = 3e-008
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +2
Query: 500 RTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPR 679
R+ S+ S SRGRS RSRSRS SRSRSP+ S RS +S S SP PR + S SPR
Sbjct: 208 RSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSR--SPSPR 265
Query: 680 R 682
R
Sbjct: 266 R 266
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 52 bits (123), Expect = 7e-007
Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Frame = +2
Query: 464 SRKR-PEEMRVKTR----TRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRS 628
SR R P+ +R + R +RSR SGS RS RSRS S SRSRSPR D RSRS
Sbjct: 954 SRSRSPDLVRPRRRSSSYSRSRSRSGSYSRSRSRSRSWSRSRSRSPRHSRDRGGHNRSRS 1013
Query: 629 YSPAP 643
YS +P
Sbjct: 1014 YSRSP 1018
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,862,965,983
Number of Sequences: 33410
Number of Extensions: 10862965983
Number of Successful Extensions: 364671362
Number of sequences better than 0.0: 0
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