BLASTX 7.6.2
Query= UN20756 /QuerySize=707
(706 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G14320.1 | Symbols: | 30S ribosomal protein S... 324 4e-089
TAIR9_protein||AT5G14320.2 | Symbols: | 30S ribosomal protein S... 213 1e-055
TAIR9_protein||AT1G77750.1 | Symbols: | 30S ribosomal protein S... 128 5e-030
>TAIR9_protein||AT5G14320.1 | Symbols: | 30S ribosomal protein S13, chloroplast
(CS13) | chr5:4617839-4618772 REVERSE
Length = 170
Score = 324 bits (829), Expect = 4e-089
Identities = 161/170 (94%), Positives = 166/170 (97%)
Frame = +1
Query: 49 MAQMVAMPVAHSLSLICNWTKSSPLTRNTLALPPTNAPSKQSLSIRCARVGGVEIPSNKR 228
MAQMVAMPVAHSLSLICNW KS+PL+RNTLALP +N P+KQSLSIRCARVGGVEIP+NKR
Sbjct: 1 MAQMVAMPVAHSLSLICNWAKSNPLSRNTLALPASNTPNKQSLSIRCARVGGVEIPANKR 60
Query: 229 IEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNAL 408
IEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNAL
Sbjct: 61 IEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNAL 120
Query: 409 AIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK* 558
AIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK*
Sbjct: 121 AIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIAGKKKVSK* 170
>TAIR9_protein||AT5G14320.2 | Symbols: | 30S ribosomal protein S13, chloroplast
(CS13) | chr5:4618189-4618772 REVERSE
Length = 129
Score = 213 bits (541), Expect = 1e-055
Identities = 106/114 (92%), Positives = 111/114 (97%)
Frame = +1
Query: 49 MAQMVAMPVAHSLSLICNWTKSSPLTRNTLALPPTNAPSKQSLSIRCARVGGVEIPSNKR 228
MAQMVAMPVAHSLSLICNW KS+PL+RNTLALP +N P+KQSLSIRCARVGGVEIP+NKR
Sbjct: 1 MAQMVAMPVAHSLSLICNWAKSNPLSRNTLALPASNTPNKQSLSIRCARVGGVEIPANKR 60
Query: 229 IEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDL 390
IEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDL
Sbjct: 61 IEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDL 114
>TAIR9_protein||AT1G77750.1 | Symbols: | 30S ribosomal protein S13,
chloroplast, putative | chr1:29230346-29231490 REVERSE
Length = 155
Score = 128 bits (320), Expect = 5e-030
Identities = 62/127 (48%), Positives = 86/127 (67%)
Frame = +1
Query: 175 LSIRCARVGGVEIPSNKRIEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILR 354
L ++ RVG E+P+NK ++ LQ ++GIGR ++ Q+L L + NK+ +D+ +ELI LR
Sbjct: 27 LRVQGIRVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGITNKLARDLTGKELIDLR 86
Query: 355 DEVSKYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIA 534
+EV ++ +LRR I+RL E+ CYRG RH GLPCRGQRT N RT KGK +AIA
Sbjct: 87 EEVGQHQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKKGKAVAIA 146
Query: 535 GKKKVSK 555
GKKK +
Sbjct: 147 GKKKAPR 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,862,965,983
Number of Sequences: 33410
Number of Extensions: 10862965983
Number of Successful Extensions: 364671362
Number of sequences better than 0.0: 0
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