BLASTX 7.6.2
Query= UN20807 /QuerySize=498
(497 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G15270.1 | Symbols: | FUNCTIONS IN: molecular... 123 8e-029
TAIR9_protein||AT3G16040.1 | Symbols: | FUNCTIONS IN: molecular... 118 2e-027
>TAIR9_protein||AT1G15270.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Translation machinery
associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G16040.1); Has 263 Blast hits to 263
proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi
- 48; Plants - 41; Viruses - 0; Other Eukaryotes - 21 (source: NCBI
BLink). | chr1:5250833-5252020 REVERSE
Length = 65
Score = 123 bits (307), Expect = 8e-029
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = -2
Query: 367 MSSKQGGKAKPLKQPKTDKKEYDEHDMANLQKKKDEEKALKELRAKASQKGSFGGSGLKK 188
MSSKQGGKAKPLKQPK DKKEYDE D+AN+QKKKDEEKALKELRAKASQKGSFGGSGLKK
Sbjct: 1 MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKK 60
Query: 187 SGKK* 173
SGKK*
Sbjct: 61 SGKK* 65
>TAIR9_protein||AT3G16040.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C
globular stage, petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Translation machinery associated TMA7
(InterPro:IPR015157); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G15270.1); Has 264 Blast hits to 264 proteins
in 91 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 48;
Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). |
chr3:5443202-5443810 FORWARD
Length = 65
Score = 118 bits (295), Expect = 2e-027
Identities = 58/65 (89%), Positives = 60/65 (92%)
Frame = -2
Query: 367 MSSKQGGKAKPLKQPKTDKKEYDEHDMANLQKKKDEEKALKELRAKASQKGSFGGSGLKK 188
MSSKQGGK KPLKQPK+ KKEYDEHDM +QKKKDEEKALKELRAKASQKGSFGGSGLKK
Sbjct: 1 MSSKQGGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALKELRAKASQKGSFGGSGLKK 60
Query: 187 SGKK* 173
SGKK*
Sbjct: 61 SGKK* 65
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,906,428,721
Number of Sequences: 33410
Number of Extensions: 10906428721
Number of Successful Extensions: 364740855
Number of sequences better than 0.0: 0
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