BLASTX 7.6.2
Query= UN20886 /QuerySize=1611
(1610 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G00830.1 | Symbols: | RNA recognition motif (... 758 4e-219
TAIR9_protein||AT4G00830.2 | Symbols: | RNA recognition motif (... 758 4e-219
TAIR9_protein||AT3G52660.1 | Symbols: | RNA recognition motif (... 423 2e-118
TAIR9_protein||AT3G52660.2 | Symbols: | RNA recognition motif (... 423 2e-118
TAIR9_protein||AT2G44710.1 | Symbols: | RNA recognition motif (... 130 3e-030
TAIR9_protein||AT5G28390.1 | Symbols: | RNA recognition motif (... 122 1e-027
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 61 2e-009
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 61 2e-009
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 61 2e-009
TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, pu... 60 5e-009
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 59 6e-009
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 59 6e-009
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 59 6e-009
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 59 6e-009
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 58 2e-008
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 57 2e-008
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 57 2e-008
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 57 4e-008
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 56 5e-008
>TAIR9_protein||AT4G00830.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:352782-354965 FORWARD
Length = 496
Score = 758 bits (1955), Expect = 4e-219
Identities = 387/481 (80%), Positives = 421/481 (87%), Gaps = 26/481 (5%)
Frame = +2
Query: 53 DVDDRVDYEDGSSSEMEEEHVEEDDD-DSQNDEEHDVEGYGGRKSEEAE------AEDED 211
+++D V+ E E EEE ++DDD +QN EE +VE YG K + E AED+D
Sbjct: 20 EMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEEIAEDDD 79
Query: 212 NNIDIDIETAEDEE------EEEEREEYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCE 373
N+ IDIETA+D+E ++E+RE+YSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCE
Sbjct: 80 NH--IDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCE 137
Query: 374 PIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELHSKQFKGKTIRCSLSETKNR 553
IG+IFEVRLMKDRDSG+SKGYAFV FKTKDVAQKAIEELHSK+FKGKTIRCSLSETKNR
Sbjct: 138 EIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNR 197
Query: 554 LFIGNIPKDWTEDEFRKVIEDVGPGVESIELIKDPTNSARNRGFAFVLYYNNACADYSRQ 733
LFIGNIPK+WTEDEFRKVIEDVGPGVE+IELIKDPTN+ RNRGFAFVLYYNNACADYSRQ
Sbjct: 198 LFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSRQ 257
Query: 734 KMIDSSFKLEGNAPTVTWADPKSSPETSAAAAQVKALYVKNIPENTSTEQLKELFQRHGG 913
KMIDS+FKLEGNAPTVTWADPKSSPE SAAAAQVKALYVKNIPENTSTEQLKELFQRHG
Sbjct: 258 KMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGE 317
Query: 914 VTKVVTPPGKGGKRDFGFVHYAERSSALRAVKDSERYEINGQELEVVLAKPQAERKHEPS 1093
VTK+VTPPGKGGKRDFGFVHYAERSSAL+AVKD+ERYE+NGQ LEVVLAKPQAERKH+PS
Sbjct: 318 VTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPS 377
Query: 1094 FYAYGAAAPTPSPFALPTFGGFAAPPYGAM----GIAGSFVQPMIYGRGAMPTGMQMVPM 1261
Y+YG AAPTP+PF PTFGGFAA PYGAM GIAGSF QPMIYGRGAMPTGMQMVPM
Sbjct: 378 SYSYG-AAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPM 436
Query: 1262 LLPDGRVGYVLQQPGMQM--APPARPRRDDRNN---GGSGRENRHDDHDGNRGGRRYRPY 1426
LLPDGRVGYVLQQPGM M APP RPRR+DRNN GGSGR+N H +HDGNRGGRRYRPY
Sbjct: 437 LLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNSH-EHDGNRGGRRYRPY 495
Query: 1427 * 1429
*
Sbjct: 496 * 496
>TAIR9_protein||AT4G00830.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:352782-354965 FORWARD
Length = 496
Score = 758 bits (1955), Expect = 4e-219
Identities = 387/481 (80%), Positives = 421/481 (87%), Gaps = 26/481 (5%)
Frame = +2
Query: 53 DVDDRVDYEDGSSSEMEEEHVEEDDD-DSQNDEEHDVEGYGGRKSEEAE------AEDED 211
+++D V+ E E EEE ++DDD +QN EE +VE YG K + E AED+D
Sbjct: 20 EMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGGDMEDVQEEIAEDDD 79
Query: 212 NNIDIDIETAEDEE------EEEEREEYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCE 373
N+ IDIETA+D+E ++E+RE+YSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCE
Sbjct: 80 NH--IDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCE 137
Query: 374 PIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELHSKQFKGKTIRCSLSETKNR 553
IG+IFEVRLMKDRDSG+SKGYAFV FKTKDVAQKAIEELHSK+FKGKTIRCSLSETKNR
Sbjct: 138 EIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNR 197
Query: 554 LFIGNIPKDWTEDEFRKVIEDVGPGVESIELIKDPTNSARNRGFAFVLYYNNACADYSRQ 733
LFIGNIPK+WTEDEFRKVIEDVGPGVE+IELIKDPTN+ RNRGFAFVLYYNNACADYSRQ
Sbjct: 198 LFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSRQ 257
Query: 734 KMIDSSFKLEGNAPTVTWADPKSSPETSAAAAQVKALYVKNIPENTSTEQLKELFQRHGG 913
KMIDS+FKLEGNAPTVTWADPKSSPE SAAAAQVKALYVKNIPENTSTEQLKELFQRHG
Sbjct: 258 KMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGE 317
Query: 914 VTKVVTPPGKGGKRDFGFVHYAERSSALRAVKDSERYEINGQELEVVLAKPQAERKHEPS 1093
VTK+VTPPGKGGKRDFGFVHYAERSSAL+AVKD+ERYE+NGQ LEVVLAKPQAERKH+PS
Sbjct: 318 VTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPS 377
Query: 1094 FYAYGAAAPTPSPFALPTFGGFAAPPYGAM----GIAGSFVQPMIYGRGAMPTGMQMVPM 1261
Y+YG AAPTP+PF PTFGGFAA PYGAM GIAGSF QPMIYGRGAMPTGMQMVPM
Sbjct: 378 SYSYG-AAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPM 436
Query: 1262 LLPDGRVGYVLQQPGMQM--APPARPRRDDRNN---GGSGRENRHDDHDGNRGGRRYRPY 1426
LLPDGRVGYVLQQPGM M APP RPRR+DRNN GGSGR+N H +HDGNRGGRRYRPY
Sbjct: 437 LLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNSH-EHDGNRGGRRYRPY 495
Query: 1427 * 1429
*
Sbjct: 496 * 496
>TAIR9_protein||AT3G52660.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19522598-19524735 FORWARD
Length = 472
Score = 423 bits (1087), Expect = 2e-118
Identities = 221/489 (45%), Positives = 310/489 (63%), Gaps = 46/489 (9%)
Frame = +2
Query: 29 ASSMSDAPDVDDRVDYE-DGSSSEMEEEHVEEDDDDSQNDEEHDVEGYGGRKSEEAEAED 205
AS D+ + ++RVD + D E+ EE VE ++ EE ++E EE E E+
Sbjct: 8 ASEAHDSMESEERVDLDGDNDPEEILEEEVEYEE-----VEEEEIEEIEEEIEEEVEVEE 62
Query: 206 EDNNIDIDIETAEDEEEEEEREEYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGD 385
E+ E A EEEEE++ + LL+LPPHGSEV++GG+P D E DL+ C IG+
Sbjct: 63 EEEE-----EDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSIGE 117
Query: 386 IFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELHSKQFKGKTIRCSLSETKNRLFIG 565
+ EVR+M+++DSG+ KGYAFV F++KD+A +AI+ L++ F+GK I+CS ++ K+RLF+G
Sbjct: 118 VTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLFLG 177
Query: 566 NIPKDWTEDEFRKVIEDVGPGVESIELIKDPTNSARNRGFAFVLYYNNACADYSRQKMID 745
N+P++W E + +K +GPGV+ +EL K+P N RNRGFAF+ YYN+ACA+YS+QKM +
Sbjct: 178 NVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKMSN 237
Query: 746 SSFKLEGNAPTVTWADPKSSPETSAAAAQVKALYVKNIPENTSTEQLKELFQRHGGVTKV 925
SFKL+ NAPTV+WA+ +S ++A+QVKALY+KN+P + + E+LK LF+ HG + KV
Sbjct: 238 PSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKV 297
Query: 926 VTPPGKGGKRD--FGFVHYAERSSALRAVKDSERYEINGQELEVVLAKPQAERK------ 1081
V PP K GK D +GFVHYAER+S +RA+K++ERYEI+G L+ LAKPQA++K
Sbjct: 298 VIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTNTV 357
Query: 1082 ----------HEPSFYAYGAAAPTPSPFALPTFGGFAAPPYGAMGIAGSFVQPMIYGRGA 1231
+ P +YG A PSPF GGF A Y QP+++ G
Sbjct: 358 QNVQKSQLQPNYPPLLSYGMA---PSPFG--ALGGFGASAYS---------QPLMHAGGH 403
Query: 1232 MPTGMQMVPMLLPDGRVGYVLQQPGMQMAPPARPRRDDRNNGGSGRENRHD---DHDGNR 1402
GM M+P++LPDGR+GYVLQQPG+ P PR GGSG + D R
Sbjct: 404 AAGGMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGR 463
Query: 1403 GGRRYRPY* 1429
G RY PY*
Sbjct: 464 GRSRYNPY* 472
>TAIR9_protein||AT3G52660.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19522598-19524735 FORWARD
Length = 472
Score = 423 bits (1087), Expect = 2e-118
Identities = 221/489 (45%), Positives = 310/489 (63%), Gaps = 46/489 (9%)
Frame = +2
Query: 29 ASSMSDAPDVDDRVDYE-DGSSSEMEEEHVEEDDDDSQNDEEHDVEGYGGRKSEEAEAED 205
AS D+ + ++RVD + D E+ EE VE ++ EE ++E EE E E+
Sbjct: 8 ASEAHDSMESEERVDLDGDNDPEEILEEEVEYEE-----VEEEEIEEIEEEIEEEVEVEE 62
Query: 206 EDNNIDIDIETAEDEEEEEEREEYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGD 385
E+ E A EEEEE++ + LL+LPPHGSEV++GG+P D E DL+ C IG+
Sbjct: 63 EEEE-----EDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSIGE 117
Query: 386 IFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELHSKQFKGKTIRCSLSETKNRLFIG 565
+ EVR+M+++DSG+ KGYAFV F++KD+A +AI+ L++ F+GK I+CS ++ K+RLF+G
Sbjct: 118 VTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLFLG 177
Query: 566 NIPKDWTEDEFRKVIEDVGPGVESIELIKDPTNSARNRGFAFVLYYNNACADYSRQKMID 745
N+P++W E + +K +GPGV+ +EL K+P N RNRGFAF+ YYN+ACA+YS+QKM +
Sbjct: 178 NVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKMSN 237
Query: 746 SSFKLEGNAPTVTWADPKSSPETSAAAAQVKALYVKNIPENTSTEQLKELFQRHGGVTKV 925
SFKL+ NAPTV+WA+ +S ++A+QVKALY+KN+P + + E+LK LF+ HG + KV
Sbjct: 238 PSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKV 297
Query: 926 VTPPGKGGKRD--FGFVHYAERSSALRAVKDSERYEINGQELEVVLAKPQAERK------ 1081
V PP K GK D +GFVHYAER+S +RA+K++ERYEI+G L+ LAKPQA++K
Sbjct: 298 VIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTNTV 357
Query: 1082 ----------HEPSFYAYGAAAPTPSPFALPTFGGFAAPPYGAMGIAGSFVQPMIYGRGA 1231
+ P +YG A PSPF GGF A Y QP+++ G
Sbjct: 358 QNVQKSQLQPNYPPLLSYGMA---PSPFG--ALGGFGASAYS---------QPLMHAGGH 403
Query: 1232 MPTGMQMVPMLLPDGRVGYVLQQPGMQMAPPARPRRDDRNNGGSGRENRHD---DHDGNR 1402
GM M+P++LPDGR+GYVLQQPG+ P PR GGSG + D R
Sbjct: 404 AAGGMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGR 463
Query: 1403 GGRRYRPY* 1429
G RY PY*
Sbjct: 464 GRSRYNPY* 472
>TAIR9_protein||AT2G44710.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:18432902-18436629 FORWARD
Length = 810
Score = 130 bits (326), Expect = 3e-030
Identities = 91/336 (27%), Positives = 176/336 (52%), Gaps = 15/336 (4%)
Frame = +2
Query: 71 DYEDGSSSEMEEEHVEEDDDDSQNDEEHDVEGYG-----GRKSEEAEAEDEDNNIDIDIE 235
++E+ + + E V E+ ++ + + E + E G +E+ ++ED+D++ I+ E
Sbjct: 129 EFEERELGQEDHELVNEEGEELEEEIEVEEEAGEFADEIGDGAEDLDSEDDDDDHAIE-E 187
Query: 236 TAEDEEEEEEREEYSHLL--SLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMK 409
E + E EE+ +L E+F+G L + EEDL+ + +G++ EVR++K
Sbjct: 188 VKHGETVDVEEEEHHDVLHERRKRKEFEIFVGSLDKGASEEDLKKVFGHVGEVTEVRILK 247
Query: 410 DRDSGESKGYAFVGFKTKDVAQKAIEELHSKQFKGKTIRCSLSETKNRLFIGNIPKDWTE 589
+ + +SKG AF+ F T + A++A++EL S GK + S+ + LF+GNI K WT
Sbjct: 248 NPQTKKSKGSAFLRFATVEQAKRAVKELKSPMINGKKCGVTASQDNDTLFVGNICKIWTP 307
Query: 590 DEFRKVIEDVG-PGVESIELIKDPTNSARNRGFAFVLYYNNACADYSRQKMI--DSSFKL 760
+ R+ ++ G ++ I L++D N NRG+AF+ + + + A + ++++ D F +
Sbjct: 308 EALREKLKHYGVENMDDITLVEDSNNVNMNRGYAFLEFSSRSDAMDAHKRLVKKDVMFGV 367
Query: 761 EGNAPTVTWADPKSSPETSAAAAQVKALYVKNIPENTSTEQLKELFQRHGGVTKVVTPPG 940
E A V++ D E AQVK +++ + + + E++++L + +G + KV
Sbjct: 368 EKPA-KVSFTDSFLDLE-DEIMAQVKTIFIDGLLPSWNEERVRDLLKPYGKLEKVELARN 425
Query: 941 --KGGKRDFGFVHYAERSSALRAVKDSERYEINGQE 1042
++DFGFV + +A+ K E+ E
Sbjct: 426 MPSARRKDFGFVTFDTHEAAVSCAKFINNSELGEGE 461
>TAIR9_protein||AT5G28390.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:10342024-10342997 REVERSE
Length = 181
Score = 122 bits (304), Expect = 1e-027
Identities = 57/101 (56%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = +2
Query: 737 MIDSSFKLEGNAPTVTWADPKSSPETSAAAAQVKALYVKNIPENTSTEQLKELFQRHGGV 916
M + SFKL+ NAPTV+WA+ +S E ++A+QVKALY+KN+P + + E+LK LF+ HG +
Sbjct: 1 MSNPSFKLDDNAPTVSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKI 60
Query: 917 TKVVTPPGKGGKRD--FGFVHYAERSSALRAVKDSERYEIN 1033
KVV PP K GK D +GFVHYAER+S +RA+K++ERYEI+
Sbjct: 61 LKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEID 101
Score = 75 bits (182), Expect = 1e-013
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = +2
Query: 1190 AGSFVQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMQMAPPARPRRDDRNNGGSGR 1369
A ++ QP+++ G GM M+P++LPDGR+ YVLQQPG+ P PR GGSG
Sbjct: 102 ASAYSQPLMHAGGHAAGGMSMMPIMLPDGRIRYVLQQPGLAAMPQPPPRPSPPYRGGSGS 161
Query: 1370 ENRHDDHDGNRGGRRYRPY* 1429
+ D RG RY PY*
Sbjct: 162 SSSKQSSDNGRGRSRYNPY* 181
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 61 bits (147), Expect = 2e-009
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +2
Query: 317 FIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELH 496
F+GGL +EDL+ GD+ + +++ DR+SG S+G+ FV FK + + AIEE++
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 497 SKQFKGKTIRCSLSETK 547
K+ G+ I + ++++
Sbjct: 69 GKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 61 bits (147), Expect = 2e-009
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +2
Query: 317 FIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELH 496
F+GGL +EDL+ GD+ + +++ DR+SG S+G+ FV FK + + AIEE++
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 497 SKQFKGKTIRCSLSETK 547
K+ G+ I + ++++
Sbjct: 69 GKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 61 bits (147), Expect = 2e-009
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +2
Query: 317 FIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIEELH 496
F+GGL +EDL+ GD+ + +++ DR+SG S+G+ FV FK + + AIEE++
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 497 SKQFKGKTIRCSLSETK 547
K+ G+ I + ++++
Sbjct: 69 GKELDGRVITVNEAQSR 85
>TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, putative |
chr5:1878497-1879515 FORWARD
Length = 147
Score = 60 bits (143), Expect = 5e-009
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +2
Query: 308 SEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIE 487
S++FIGGL E+ L + G + E +++ DR S SKG+ FV F + D AQKA+
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM 93
Query: 488 ELHSKQFKGKTIRCSLSETKNRL 556
E + +Q G+TI ++ K L
Sbjct: 94 EFNGQQLNGRTIFVDYAKAKQSL 116
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 59 bits (142), Expect = 6e-009
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 278 SHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFK 457
S L SL +++FIGGL + LRD GD+ + +++ DR++G S+G+ FV F
Sbjct: 25 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 84
Query: 458 TKDVAQKAIEELHSKQFKGKTIR 526
+ A AI E+ K+ G+ IR
Sbjct: 85 DEGAATAAISEMDGKELNGRHIR 107
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 59 bits (142), Expect = 6e-009
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 278 SHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFK 457
S L SL +++FIGGL + LRD GD+ + +++ DR++G S+G+ FV F
Sbjct: 25 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 84
Query: 458 TKDVAQKAIEELHSKQFKGKTIR 526
+ A AI E+ K+ G+ IR
Sbjct: 85 DEGAATAAISEMDGKELNGRHIR 107
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 59 bits (142), Expect = 6e-009
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 278 SHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFK 457
S L SL +++FIGGL + LRD GD+ + +++ DR++G S+G+ FV F
Sbjct: 25 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 84
Query: 458 TKDVAQKAIEELHSKQFKGKTIR 526
+ A AI E+ K+ G+ IR
Sbjct: 85 DEGAATAAISEMDGKELNGRHIR 107
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 59 bits (142), Expect = 6e-009
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +2
Query: 278 SHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFK 457
S L SL +++FIGGL + LRD GD+ + +++ DR++G S+G+ FV F
Sbjct: 25 SMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 84
Query: 458 TKDVAQKAIEELHSKQFKGKTIR 526
+ A AI E+ K+ G+ IR
Sbjct: 85 DEGAATAAISEMDGKELNGRHIR 107
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 58 bits (138), Expect = 2e-008
Identities = 23/80 (28%), Positives = 48/80 (60%)
Frame = +2
Query: 308 SEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIE 487
S++FIGG+ + E+ LR+ G++ + R++ DR++G S+G+ FV F + + A AI+
Sbjct: 40 SKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQ 99
Query: 488 ELHSKQFKGKTIRCSLSETK 547
L + G+ ++ + + +
Sbjct: 100 ALDGRDLHGRVVKVNYANDR 119
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 57 bits (137), Expect = 2e-008
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +2
Query: 305 GSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAI 484
G+ +++G L V + L +L G + E R++ DRDSG SKG+ FV + QKAI
Sbjct: 256 GNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 315
Query: 485 EELHSKQFKGKTIRCSLSETK 547
L+ G+ IR S +E +
Sbjct: 316 NSLNGADLDGRQIRVSEAEAR 336
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 57 bits (137), Expect = 2e-008
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +2
Query: 305 GSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAI 484
G+ +++G L V + L +L G + E R++ DRDSG SKG+ FV + QKAI
Sbjct: 256 GNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 315
Query: 485 EELHSKQFKGKTIRCSLSETK 547
L+ G+ IR S +E +
Sbjct: 316 NSLNGADLDGRQIRVSEAEAR 336
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 57 bits (135), Expect = 4e-008
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = +2
Query: 305 GSEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAI 484
G+ V++G L V + L L G + E R++ DRDSG SKG+ FV + + Q AI
Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262
Query: 485 EELHSKQFKGKTIRCSLSETK 547
+ L G+ IR S +E +
Sbjct: 263 KSLDGADLDGRQIRVSEAEAR 283
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 56 bits (134), Expect = 5e-008
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +2
Query: 308 SEVFIGGLPRDVGEEDLRDLCEPIGDIFEVRLMKDRDSGESKGYAFVGFKTKDVAQKAIE 487
S++FIGGL V E+ L+D G++ EVR+ D+ SG S+G+ FV F + A A +
Sbjct: 41 SKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKD 100
Query: 488 ELHSKQFKGKTIRCSLS 538
+ K G+ +R S +
Sbjct: 101 AMDGKGLLGRPLRISFA 117
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,949,370,268
Number of Sequences: 33410
Number of Extensions: 10949370268
Number of Successful Extensions: 364766074
Number of sequences better than 0.0: 0
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