BLASTX 7.6.2
Query= UN20933 /QuerySize=1609
(1608 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O94260|G3BP_SCHPO Putative G3BP-like protein OS=Schizosacchar... 94 3e-018
sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus mus... 55 1e-006
sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sa... 55 2e-006
sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos tau... 53 5e-006
sp|Q6CC82|NTF2_YARLI Nuclear transport factor 2 OS=Yarrowia lipo... 53 5e-006
sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sa... 53 6e-006
>sp|O94260|G3BP_SCHPO Putative G3BP-like protein OS=Schizosaccharomyces pombe
GN=nxt3 PE=1 SV=1
Length = 434
Score = 94 bits (232), Expect = 3e-018
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 8/157 (5%)
Frame = +2
Query: 233 PLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSV-SSLKAINEQI 409
P+ +G FVQ+YY +L + P ++H FY + S L G +GE +S+ + I+ +I
Sbjct: 11 PVLGKDEIGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIH-GDEGESISLCHGQQEIHNKI 69
Query: 410 MSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLN 589
+ D++N K+ I DS AS G+V V G ++ K +F+Q+FFL Q YFVLN
Sbjct: 70 LDLDFQNCKVLISNVDSLASSNGGIVIQVLGEMSNKGKLSRKFAQTFFLAEQPNGYFVLN 129
Query: 590 DVFRYVSDELVVSHQEEVEEVVTQVVQTTTKDTILEP 700
D+FR++ +++ E EE V+ KD EP
Sbjct: 130 DIFRFLREDV------EEEEESPDAVEKEKKDVASEP 160
>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6
PE=2 SV=1
Length = 460
Score = 55 bits (132), Expect = 1e-006
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Frame = +2
Query: 890 PRPVKKPSA-APESKAPPQHYSSAEAVNQS--EGGSIFVANLPMDATPEQLNETFKGFGA 1060
P P PSA AP S A Q S+ + EG ++F+ +LP + +L +TF FGA
Sbjct: 341 PYPAAYPSAYAPASTAFSQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGA 400
Query: 1061 IRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEKRGNNEN 1237
+ + V + CFGFV+F++ + + +QA + +IG +R+ ++ KR + N
Sbjct: 401 VVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQA--MNGFQIGMKRLKVQLKRPKDAN 457
>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6
PE=1 SV=1
Length = 481
Score = 55 bits (130), Expect = 2e-006
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Frame = +2
Query: 908 PSA-APESKAPPQHYSSAEAVNQS--EGGSIFVANLPMDATPEQLNETFKGFGAIRKDSI 1078
PSA AP S A PQ S+ + EG ++F+ +LP + +L +TF FGA+ +
Sbjct: 368 PSAYAPVSTAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKV 427
Query: 1079 QVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEKRGNNEN 1237
V + CFGFV+F++ + + +QA + +IG +R+ ++ KR + N
Sbjct: 428 FVDRATNQSKCFGFVSFDNPTSAQTAIQA--MNGFQIGMKRLKVQLKRPKDAN 478
>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3
PE=2 SV=1
Length = 461
Score = 53 bits (126), Expect = 5e-006
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Frame = +2
Query: 878 SPAKPRPVKKPSAAPESKAPPQHYSSAEAVNQS-----EGGSIFVANLPMDATPEQLNET 1042
+PA P+P P+ + PP + Q +G +IF+ +LP + T ++ +
Sbjct: 339 APAFPQP---PALVAQQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQM 395
Query: 1043 FKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEKR 1222
F FG + + V + CFGFV+F++ + + +QA + +IG +R+ ++ KR
Sbjct: 396 FVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA--MNGFQIGMKRLKVQLKR 453
Query: 1223 GNNEN 1237
+ N
Sbjct: 454 PKDAN 458
>sp|Q6CC82|NTF2_YARLI Nuclear transport factor 2 OS=Yarrowia lipolytica GN=NTF2
PE=3 SV=1
Length = 123
Score = 53 bits (126), Expect = 5e-006
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Frame = +2
Query: 242 DPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAINEQIMSFD 421
D + + F + YY +Q+ Y + S+L G+ + +AI E+++
Sbjct: 4 DFNTLAKQFCEFYYQTFDTDRSQLGNLYRDHSMLTFTGTQHQ-----GAQAIVEKLVGLP 58
Query: 422 YENTKIQILTADSQASYKSG--VVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLNDV 595
+ + +I D+Q + G V+ LVTG L V + ++Q F L+P SY+V ND+
Sbjct: 59 FGQVRHKISDIDAQPASAQGGDVIVLVTGELCVDGDNPLPYAQVFHLIPDGSSYYVFNDI 118
Query: 596 FR 601
FR
Sbjct: 119 FR 120
>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3
PE=1 SV=1
Length = 465
Score = 53 bits (125), Expect = 6e-006
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Frame = +2
Query: 878 SPAKPRP----VKKPSAAPESKAPPQHYSSAEAVNQS-EGGSIFVANLPMDATPEQLNET 1042
+PA P+P ++P P+ + Q + + +G +IF+ +LP + T ++ +
Sbjct: 340 APAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQM 399
Query: 1043 FKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEKR 1222
F FG + + V + CFGFV+F++ + + +QA + +IG +R+ ++ KR
Sbjct: 400 FVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA--MNGFQIGMKRLKVQLKR 457
Query: 1223 GNNEN 1237
+ N
Sbjct: 458 PKDAN 462
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,924,390,942
Number of Sequences: 518415
Number of Extensions: 86924390942
Number of Successful Extensions: 587655121
Number of sequences better than 0.0: 0
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