BLASTX 7.6.2
Query= UN20933 /QuerySize=1609
(1608 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport facto... 520 2e-147
TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport facto... 398 7e-111
TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport facto... 395 5e-110
TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport facto... 138 2e-032
TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport facto... 136 7e-032
TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport facto... 136 7e-032
TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport facto... 117 3e-026
TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport facto... 117 3e-026
TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport facto... 105 1e-022
TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport facto... 82 7e-016
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 79 6e-015
TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport facto... 58 1e-008
>TAIR9_protein||AT1G13730.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:4710519-4712332 FORWARD
Length = 429
Score = 520 bits (1337), Expect = 2e-147
Identities = 298/436 (68%), Positives = 336/436 (77%), Gaps = 51/436 (11%)
Frame = +2
Query: 212 MGMESHAPLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLK 391
M +ES+AP+ DP+ +GN+FV+KYYN LY+SP+QVH+FYL+DSVLGRPGSDGEMVSV SLK
Sbjct: 1 MALESNAPVVDPNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLK 60
Query: 392 AINEQIMSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKG 571
AINEQIMSFDYE +KIQILTADSQASY +GVVTLVTGLLTVK+G RMRFSQSFFLVP G
Sbjct: 61 AINEQIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNG 120
Query: 572 SYFVLNDVFRYVSDELV--VSHQEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQ- 742
SYFVLNDVFRYV+DE+V ++++EVEEV+ QVVQ T E EVAEPVT Q
Sbjct: 121 SYFVLNDVFRYVADEIVEPEANKKEVEEVIPQVVQPT------EQVDEVAEPVTIPTQQP 174
Query: 743 ---QATETLAKEPERA---GHPKTQEENV-------VDAPKKSFAVIVQSPAKVG----V 871
Q TE K+PERA GHPKTQE+NV VDAPKKSFA IVQ A+ G
Sbjct: 175 EAKQTTENTVKKPERAVANGHPKTQEDNVVNDKSNGVDAPKKSFAHIVQDLAQNGATFNA 234
Query: 872 KASPAKP--RPVKKPSAAPESKAP---PQHYSSAEAVNQSEGGSIFVANLPMDATPEQLN 1036
KASPAKP +PV KPSAA ESKAP +H S+A Q+EG +IFVANL MDATPEQLN
Sbjct: 235 KASPAKPKSKPVTKPSAARESKAPAPVSEHSSAATIDQQAEGYTIFVANLLMDATPEQLN 294
Query: 1037 ETFKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEE 1216
ETFKGFGAI KD IQVRSYRLKGNCFGFVTF SAEAVKLVLQAHKESAIRIGNRRVSIEE
Sbjct: 295 ETFKGFGAITKDGIQVRSYRLKGNCFGFVTFASAEAVKLVLQAHKESAIRIGNRRVSIEE 354
Query: 1217 KRGNNENGRSSMRNDGFS----------RP--------RSHGRNGYERRGESRNGEANND 1342
KRGNN+NGR +MRN G+ RP R +GRNG ERRGESRNGEA+N
Sbjct: 355 KRGNNDNGRPAMRNGGYRNDNGYRNDGYRPRGNGSNGGRGYGRNGSERRGESRNGEAHN- 413
Query: 1343 GDGSRAYQNGLVKANR 1390
GDG + +QNG V+A+R
Sbjct: 414 GDG-KVHQNGTVEASR 428
>TAIR9_protein||AT2G03640.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 423
Score = 398 bits (1021), Expect = 7e-111
Identities = 229/421 (54%), Positives = 280/421 (66%), Gaps = 44/421 (10%)
Frame = +2
Query: 212 MGMESHAPLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLK 391
M ES+AP DP VGN FVQ+YYNHLY+S ++VH+FYLEDS++ RPG DGE+V++ SLK
Sbjct: 1 MTPESNAPSVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLK 60
Query: 392 AINEQIMSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKG 571
IN+QIMS DY++++I+ILTADSQ++ K+GVVTLVTGL+ DGGR +FSQSFFLV + G
Sbjct: 61 GINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNG 120
Query: 572 SYFVLNDVFRYVSDELVVSHQEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQAT 751
SYFVLND FRYVSDE V E +V ++ + + I EPA+E E V + T
Sbjct: 121 SYFVLNDTFRYVSDEFV------EPEATKEVEESQSTNAITEPANESVEAVIVPTEAKTT 174
Query: 752 ETLAKEPERAGHPKTQEENVV----------------DAPKKSFAVIVQSPAK----VGV 871
T GH K EE VV + PKKSFA+IVQS A+ + V
Sbjct: 175 VTKPASAIPNGHAKVPEEKVVNENSSLPKAAEAKLQEEVPKKSFALIVQSLAQSAGTLQV 234
Query: 872 KASPAKPRPVKKPSAAPESKAPP--QHYSSAEAVN-QSEGGSIFVANLPMDATPEQLNET 1042
KASP K +PV+KP AAPE KAP + +SAE++ Q++G SIFVANLPMDAT EQL ET
Sbjct: 235 KASPVKRKPVEKPVAAPERKAPSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYET 294
Query: 1043 FKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEKR 1222
FK FGAIRKD IQVRSY K NC GFV FE+ EAVK V QAH+ES IRIGNRR SIEEKR
Sbjct: 295 FKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEKR 354
Query: 1223 -GNNENGR--SSMRNDGFSRPRSHGRNGYERRGES---------RNGEANNDGDGSRAYQ 1366
GNN+NG S+ N G+ R+GY+ RG RN E+N DG +AYQ
Sbjct: 355 GGNNQNGNRVSTRNNSGYKNEDGFRRDGYKPRGSGVNGGRGYGRRNSESNGDG---KAYQ 411
Query: 1367 N 1369
N
Sbjct: 412 N 412
>TAIR9_protein||AT2G03640.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr2:1104525-1106418 REVERSE
Length = 424
Score = 395 bits (1014), Expect = 5e-110
Identities = 231/422 (54%), Positives = 279/422 (66%), Gaps = 45/422 (10%)
Frame = +2
Query: 212 MGMESHAPLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLK 391
M ES+AP DP VGN FVQ+YYNHLY+S ++VH+FYLEDS++ RPG DGE+V++ SLK
Sbjct: 1 MTPESNAPSVDPQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLK 60
Query: 392 AINEQIMSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKG 571
IN+QIMS DY++++I+ILTADSQ++ K+GVVTLVTGL+ DGGR +FSQSFFLV + G
Sbjct: 61 GINDQIMSIDYKSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNG 120
Query: 572 SYFVLNDVFRYVSDELVVSH-QEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQA 748
SYFVLND FRYVSDE V +EVEE +T EPA+E E V +
Sbjct: 121 SYFVLNDTFRYVSDEFVEPEATKEVEE------SQSTNAITAEPANESVEAVIVPTEAKT 174
Query: 749 TETLAKEPERAGHPKTQEENVV----------------DAPKKSFAVIVQSPAK----VG 868
T T GH K EE VV + PKKSFA+IVQS A+ +
Sbjct: 175 TVTKPASAIPNGHAKVPEEKVVNENSSLPKAAEAKLQEEVPKKSFALIVQSLAQSAGTLQ 234
Query: 869 VKASPAKPRPVKKPSAAPESKAPP--QHYSSAEAVN-QSEGGSIFVANLPMDATPEQLNE 1039
VKASP K +PV+KP AAPE KAP + +SAE++ Q++G SIFVANLPMDAT EQL E
Sbjct: 235 VKASPVKRKPVEKPVAAPERKAPSPIRKQASAESIKPQAQGSSIFVANLPMDATIEQLYE 294
Query: 1040 TFKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEK 1219
TFK FGAIRKD IQVRSY K NC GFV FE+ EAVK V QAH+ES IRIGNRR SIEEK
Sbjct: 295 TFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAVKNVFQAHRESPIRIGNRRASIEEK 354
Query: 1220 R-GNNENGR--SSMRNDGFSRPRSHGRNGYERRGES---------RNGEANNDGDGSRAY 1363
R GNN+NG S+ N G+ R+GY+ RG RN E+N DG +AY
Sbjct: 355 RGGNNQNGNRVSTRNNSGYKNEDGFRRDGYKPRGSGVNGGRGYGRRNSESNGDG---KAY 411
Query: 1364 QN 1369
QN
Sbjct: 412 QN 413
>TAIR9_protein||AT3G25150.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:9157161-9159362 REVERSE
Length = 489
Score = 138 bits (345), Expect = 2e-032
Identities = 97/276 (35%), Positives = 146/276 (52%), Gaps = 22/276 (7%)
Frame = +2
Query: 230 APLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAINEQI 409
A P +VGNAFV +YY+ L++SP VHRFY E S LGRP +G M S+L+AI+++I
Sbjct: 11 AAACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKI 70
Query: 410 MSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLN 589
M+ Y +I T D+Q S+ G + LVTG LT KD R FSQ+FFL PQ+ YFVLN
Sbjct: 71 MALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLN 130
Query: 590 DVFRYVSDELVVSHQEEVEEVVTQVVQTTTKDTILEPASEVAEP------VTTILTQQAT 751
D+FR++ DE V H ++ Q T +DT A E+ + V + T
Sbjct: 131 DMFRFI-DEGTVVHGNQIPVNNVQAPVNTYQDT--AAAKEIPDDFVQEKYVQENHAVKQT 187
Query: 752 ETLAK---EPERAGHPKTQEENVVDAPKKSFAVIVQSPAKVGVKASPAKPRPVKKPSAAP 922
E L+K EPE+ P E+ V A ++ A++ ++ V +P + + V + S +
Sbjct: 188 EVLSKSINEPEKVFTPSEDEQ--VSAAEE--ALVTET-----VNEAPIEVQKVGE-SDSR 237
Query: 923 ESKAPPQHYSSAEAVNQSEGGSIFVANLPMDATPEQ 1030
+ P + Y+S V + + + P P++
Sbjct: 238 TGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKK 273
Score = 92 bits (227), Expect = 8e-019
Identities = 80/253 (31%), Positives = 114/253 (45%), Gaps = 26/253 (10%)
Frame = +2
Query: 665 VQTTTKDTILEPASEVAEPVTTILTQQATETLAKEPERAGH-PKTQEENVVDAPKKSFAV 841
V T ++D + A E T + + + R G PK ++V K++ A
Sbjct: 200 VFTPSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASIVKVMKENAAP 259
Query: 842 IVQSPAKVGVKASPAKPRPVKKPSAAPESKAPPQHYSSAEAVNQSE-----GGSIFVANL 1006
+ S V+ + + + P P S+ + A N E G SI++ L
Sbjct: 260 MSASRTPTKVEPKKQEDQAIHIPLPTPLSEKSDSGANVAVNENNQENERALGPSIYLKGL 319
Query: 1007 PMDATPEQLNETFKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIR 1186
P+DATP L F+ FG IR + IQVRS KG CFGFV FESA +++ ++A S +
Sbjct: 320 PLDATPALLENEFQKFGLIRTNGIQVRSQ--KGFCFGFVEFESASSMQSAIEA---SPVM 374
Query: 1187 IGNRRVSIEEKRG---NNENGRSSM------RNDGFSRPRSH---GRNGYERRGESRNGE 1330
+ +V +EEKR N GRS+ RN+G R R GR GY R NG
Sbjct: 375 LNGHKVVVEEKRSTARGNYRGRSTFGVNTGYRNEG-GRGRGSFGGGRGGYGR--TDFNGY 431
Query: 1331 ANNDGDGSRAYQN 1369
NN G+ Y N
Sbjct: 432 GNNRGNNRGGYAN 444
>TAIR9_protein||AT5G60980.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 460
Score = 136 bits (340), Expect = 7e-032
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
Frame = +2
Query: 212 MGMESHAPLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLK 391
M + +P +VG AFV++YY+ L++SP VHRFY + S L RP G + +V++++
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 392 AINEQIMSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKG 571
AIN++I+S YE+ +I TAD+Q S++ GV+ LVTG LT D R +FSQSFFL PQ
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 572 SYFVLNDVFRYVSDELVVSHQEEVEEVVTQVVQTTTKD 685
YFVLNDVFR++ ++ V + V + TT+D
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVP------INGTTRD 152
Score = 103 bits (256), Expect = 4e-022
Identities = 87/251 (34%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Frame = +2
Query: 605 VSDELVVSHQEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQATET-LAKEPERA 781
V E V S +EE + V +V + KD + E EP T I + P+ +
Sbjct: 170 VEPEPVASIEEEDLDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEILSVPQGDAPKHS 229
Query: 782 GHPKTQEENVVDAPKKSFAVIVQSPAKVGVKASPAKPRPVKKPSAAPESKAPPQHYSSAE 961
++ AP A PA V K + P +P+A PE+ A +S+
Sbjct: 230 YASILKQMKSSPAPTTHVARNKPRPAPVNQKLT----APPAEPAARPEASAHENVPNSSH 285
Query: 962 AVNQSEGGSIFVANLPMDATPEQLNETFKGFGAIRKDSIQVRSYRLKGNCFGFVTFESAE 1141
+ +G SI+V NLP D+TP QL E FK FGAI+ + IQVRS + +G CFGFV FE++
Sbjct: 286 VDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNK-QGFCFGFVEFETSS 344
Query: 1142 AVKLVLQAHKESAIRIGNRRVSIEEK----RGNNENGRSSMR---NDGFSRPRSH--GRN 1294
+ L+A S + IG+R+ +EEK RG NG S R G R S GR
Sbjct: 345 GKQSALEA---SPVTIGDRQAVVEEKKTNSRGGGNNGGSRGRYFSGRGSFRNESFKGGRG 401
Query: 1295 GYERRGESRNG 1327
G R G R G
Sbjct: 402 GGGRGGYGRGG 412
>TAIR9_protein||AT5G60980.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:24543988-24546027 FORWARD
Length = 461
Score = 136 bits (340), Expect = 7e-032
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
Frame = +2
Query: 212 MGMESHAPLADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLK 391
M + +P +VG AFV++YY+ L++SP VHRFY + S L RP G + +V++++
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 392 AINEQIMSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKG 571
AIN++I+S YE+ +I TAD+Q S++ GV+ LVTG LT D R +FSQSFFL PQ
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 572 SYFVLNDVFRYVSDELVVSHQEEVEEVVTQVVQTTTKD 685
YFVLNDVFR++ ++ V + V + TT+D
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVP------INGTTRD 152
Score = 128 bits (321), Expect = 1e-029
Identities = 94/292 (32%), Positives = 140/292 (47%), Gaps = 50/292 (17%)
Frame = +2
Query: 611 DELVVSHQEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQATETLAKEPERAGHP 790
+ +VVSH+ EVE ++ D + E + ++ + E P + H
Sbjct: 160 ERVVVSHEPEVEPEPVASIEEEDLDNVAEVYDPSDKDEGVVVDVEPIE----PPTQISHN 215
Query: 791 KTQEENVVDAPKKSFAVIVQSPAKVGVKASPA--------KPRPV----------KKPSA 916
+ DAPK S+A I++ +K+SPA KPRP +P+A
Sbjct: 216 EILSVPQGDAPKHSYASILKQ-----MKSSPAPTTHVARNKPRPAPVNQKLTAPPAEPAA 270
Query: 917 APESKAPPQHYSSAEAVNQSEGGSIFVANLPMDATPEQLNETFKGFGAIRKDSIQVRSYR 1096
PE+ A +S+ + +G SI+V NLP D+TP QL E FK FGAI+ + IQVRS +
Sbjct: 271 RPEASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNK 330
Query: 1097 LKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEKRGNNE-------------N 1237
+G CFGFV FE++ + L+A S + IG+R+ +EEK+ N+ +
Sbjct: 331 QQGFCFGFVEFETSSGKQSALEA---SPVTIGDRQAVVEEKKTNSRGGGNNGGSRGRYFS 387
Query: 1238 GRSSMRNDGFSRPR------SHGRNGYERRGESRNGEANNDGDG-SRAYQNG 1372
GR S RN+ F R +GR G E G ++ N G+G R QNG
Sbjct: 388 GRGSFRNESFKGGRGGGGRGGYGRGGGEFSGRPKSSNPRNGGEGYQRVPQNG 439
>TAIR9_protein||AT1G69250.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035007 FORWARD
Length = 390
Score = 117 bits (291), Expect = 3e-026
Identities = 87/245 (35%), Positives = 125/245 (51%), Gaps = 40/245 (16%)
Frame = +2
Query: 266 FVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAINEQIMSFDYENTKIQI 445
FV++YY+ L + P + R Y++ SV+ RP G M+S +S++AIN+ I+S D+ENTK ++
Sbjct: 17 FVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSCDFENTKFEV 76
Query: 446 LTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLNDVFRYVSDELVV 625
L+ DSQ S + G+ +V G +T KD R +FSQ F+L Q + VLND+ RYV D+
Sbjct: 77 LSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQ-NTLVVLNDMLRYV-DQEDS 134
Query: 626 SHQEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQATETLAKEPERA-------- 781
S E E VT++V+ PA + + T L Q+ ++ K A
Sbjct: 135 STTETPCEPVTEIVR---------PADGLKKAEKTELKQKNVASVEKSVNAAVEKNAAPL 185
Query: 782 --GHPKTQEENVV-------------DAPKKSFAVIVQSPAKVGVKASPAKPRPVKKPSA 916
G K E+ V+ D K+SFA IV S AK A P VK P
Sbjct: 186 DNGKMKQSEKAVITQKVTEPDAAPQPDGAKRSFADIVGSMAK------NAAPFQVKSPVQ 239
Query: 917 APESK 931
AP K
Sbjct: 240 APVQK 244
Score = 67 bits (161), Expect = 4e-011
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Frame = +2
Query: 632 QEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQATETLAKEPERAGHPKTQEENV 811
Q+ V V V K+ ++ + ++TQ+ TE A P+ G ++ + V
Sbjct: 164 QKNVASVEKSVNAAVEKNAAPLDNGKMKQSEKAVITQKVTEPDA-APQPDGAKRSFADIV 222
Query: 812 VDAPKKSFAVIVQSPAKVGVKASPAKPRPVKKPSAAPESKAPPQHYSSAEAVNQS----E 979
K + V+SP V+A KP+ V +P AA + P S + +Q
Sbjct: 223 GSMAKNAAPFQVKSP----VQAPVQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVP 278
Query: 980 GGSIFVANLPMDATPEQLNETFKGFGAIRKDSIQVRSYRL 1099
G SIFVANLP++A P QL E FK FG I+++ IQVRS R+
Sbjct: 279 GTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRV 318
>TAIR9_protein||AT1G69250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr1:26033163-26035301 FORWARD
Length = 428
Score = 117 bits (291), Expect = 3e-026
Identities = 87/245 (35%), Positives = 125/245 (51%), Gaps = 40/245 (16%)
Frame = +2
Query: 266 FVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAINEQIMSFDYENTKIQI 445
FV++YY+ L + P + R Y++ SV+ RP G M+S +S++AIN+ I+S D+ENTK ++
Sbjct: 17 FVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSCDFENTKFEV 76
Query: 446 LTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLNDVFRYVSDELVV 625
L+ DSQ S + G+ +V G +T KD R +FSQ F+L Q + VLND+ RYV D+
Sbjct: 77 LSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQ-NTLVVLNDMLRYV-DQEDS 134
Query: 626 SHQEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQATETLAKEPERA-------- 781
S E E VT++V+ PA + + T L Q+ ++ K A
Sbjct: 135 STTETPCEPVTEIVR---------PADGLKKAEKTELKQKNVASVEKSVNAAVEKNAAPL 185
Query: 782 --GHPKTQEENVV-------------DAPKKSFAVIVQSPAKVGVKASPAKPRPVKKPSA 916
G K E+ V+ D K+SFA IV S AK A P VK P
Sbjct: 186 DNGKMKQSEKAVITQKVTEPDAAPQPDGAKRSFADIVGSMAK------NAAPFQVKSPVQ 239
Query: 917 APESK 931
AP K
Sbjct: 240 APVQK 244
Score = 106 bits (263), Expect = 6e-023
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Frame = +2
Query: 632 QEEVEEVVTQVVQTTTKDTILEPASEVAEPVTTILTQQATETLAKEPERAGHPKTQEENV 811
Q+ V V V K+ ++ + ++TQ+ TE A P+ G ++ + V
Sbjct: 164 QKNVASVEKSVNAAVEKNAAPLDNGKMKQSEKAVITQKVTEPDA-APQPDGAKRSFADIV 222
Query: 812 VDAPKKSFAVIVQSPAKVGVKASPAKPRPVKKPSAAPESKAPPQHYSSAEAVNQS----E 979
K + V+SP V+A KP+ V +P AA + P S + +Q
Sbjct: 223 GSMAKNAAPFQVKSP----VQAPVQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVP 278
Query: 980 GGSIFVANLPMDATPEQLNETFKGFGAIRKDSIQVRSYRLKGN--CFGFVTFESAEAVKL 1153
G SIFVANLP++A P QL E FK FG I+++ IQVRS R N CFGF++FE+ +V+
Sbjct: 279 GTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRGNANPVCFGFISFETVASVQS 338
Query: 1154 VLQAHKESAIRIGNRRVSIEEKRGNNENGRSSMRNDGFSRPRSHGRNGYERRGESRNGEA 1333
VLQA K + + +R++ ++EK + + + S + G S + +NG ++ NG A
Sbjct: 339 VLQAAKNTPFMLADRKLRVKEKEVDYDGSKPSGKTKGGS---NKTQNGSADSSKTENGSA 395
Query: 1334 NND------GDGSRAYQNGLVKANREMLKPE 1408
++ DG + ++ VK+ R K E
Sbjct: 396 DDSKTNGSAEDGEKEFKQ--VKSRRNRKKSE 424
>TAIR9_protein||AT5G48650.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:19727279-19729533 FORWARD
Length = 459
Score = 105 bits (260), Expect = 1e-022
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +2
Query: 236 LADPHIVGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAINEQIMS 415
+ DP VG+AFV +YY P + RFY E S +GR G DG M S+ + I+E++
Sbjct: 10 VVDPLTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKR 69
Query: 416 FDY-ENTKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLND 592
Y + +I + D+Q S+ G + VTG T+ + R +F+Q+FFL PQ+ +FVLND
Sbjct: 70 LTYGDCNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLND 129
Query: 593 VFRYVSDELVVSHQEEVEEVVTQVVQTTTKDTI 691
+ R+V+D+ + E ++ V + +TT I
Sbjct: 130 ILRFVNDDAKDNVPETIDGEVVSGINSTTPTII 162
Score = 70 bits (169), Expect = 4e-012
Identities = 60/172 (34%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Frame = +2
Query: 866 GVKASPAKPRPVKKPSAAPESKAPPQHYSSAEAVNQSEGGSIFVANLPMDATPEQLNETF 1045
G +AS + P V + ES ++ + EAV +EG SI+V +LP +A + L F
Sbjct: 283 GQQAS-SDPSQVIESDTVSESVDASENGHNQEAV--AEGTSIYVRHLPFNANIDMLEAEF 339
Query: 1046 KGFGAIRKDSIQVRSYRLKGNCFGFVTFESAEAVKLVLQAHKESAIRIGNRRVSIEEK-- 1219
K FGAI IQV + R G +GFV FE A+A ++A S ++IG R +EEK
Sbjct: 340 KQFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEA---SPVKIGGLRAFVEEKLS 396
Query: 1220 --RGNNENGRSSM--RNDGFSRPRSHGRNGYERRGESRNGEANNDGDGSRAY 1363
RG NG RN G GR Y + R G G G R++
Sbjct: 397 TSRGKRGNGNVGYGNRNVGVG---MRGRGSYGYGYDYRRG-GRGPGGGGRSF 444
>TAIR9_protein||AT5G43960.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691653 REVERSE
Length = 451
Score = 82 bits (202), Expect = 7e-016
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Frame = +2
Query: 254 VGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAINEQIMSFDYENT 433
VG+ FV +YY L + P +H+FY E S R D + +SL I+ +MS ++ T
Sbjct: 11 VGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGD-STETANSLLHIHNMVMSLNF--T 67
Query: 434 KIQILTADSQASYKSGVVTLVTGLLTVKD-GGRMRFSQSFFLVPQKGSYFVLNDVFRYVS 610
I++ T +S S++ GV+ +V+G + K+ R F Q+FFL PQ+ YFVL+DVF +V
Sbjct: 68 AIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLSDVFLFVD 127
Query: 611 DELVVSHQ 634
+ V HQ
Sbjct: 128 EGTVYYHQ 135
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 79 bits (194), Expect = 6e-015
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Frame = +2
Query: 254 VGNAFVQKYYNHLYESPAQVHRFYLEDSVLGRPGSDGEMVSVSSLKAIN-EQIMSFDYEN 430
VG+ F ++YYN L +P +++ Y + S + RPG DG M + K + SFD
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLKWRSPGSFD--- 337
Query: 431 TKIQILTADSQASYKSGVVTLVTGLLTVKDGGRMRFSQSFFLVPQKGSYFVLNDVFRYV 607
++I + SQ S K G++ +V G LT + F+Q FFLVPQ+ Y V D+FR+V
Sbjct: 338 -SVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKGYIVCTDMFRFV 395
>TAIR9_protein||AT5G43960.2 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr5:17689154-17691220 REVERSE
Length = 392
Score = 58 bits (139), Expect = 1e-008
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Frame = +2
Query: 407 IMSFDYENTKIQILTADSQASYKSGVVTLVTGLLTVKD-GGRMRFSQSFFLVPQKGSYFV 583
+MS ++ T I++ T +S S++ GV+ +V+G + K+ R F Q+FFL PQ+ YFV
Sbjct: 2 VMSLNF--TAIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFV 59
Query: 584 LNDVFRYVSDELVVSHQ 634
L+DVF +V + V HQ
Sbjct: 60 LSDVFLFVDEGTVYYHQ 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,949,370,268
Number of Sequences: 33410
Number of Extensions: 10949370268
Number of Successful Extensions: 364766074
Number of sequences better than 0.0: 0
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