BLASTX 7.6.2
Query= UN20989 /QuerySize=772
(771 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4... 171 1e-040
gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrat... 168 8e-040
gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana] 168 1e-039
gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis ... 112 5e-023
gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis tha... 102 5e-020
gi|224070434|ref|XP_002303149.1| predicted protein [Populus tric... 64 3e-008
gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 330... 60 2e-007
gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japoni... 55 8e-006
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis
thaliana]
Length = 1188
Score = 171 bits (433), Expect = 1e-040
Identities = 93/127 (73%), Positives = 103/127 (81%), Gaps = 7/127 (5%)
Frame = -2
Query: 521 QMSRTHLPEVEKSKAPPQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRDLAAR 342
QMSR+HLPEV+K + PQTNWSEH KAL + SSVTK LSS+ LYALESQKP RD+AAR
Sbjct: 6 QMSRSHLPEVQKPRG-PQTNWSEHAKALESSSSVTKFLSSNVLYALESQKP---RDMAAR 61
Query: 341 SIAFPSVNAHTLAAAHPQIDKAWRVLSNLSINKTYLRP*ITPPVDESCTNGSYSARERST 162
SIAFPSVN HTL AHPQI KAWR LS+LS+N TYLRP +TPP+D TN SYSARERST
Sbjct: 62 SIAFPSVNVHTL--AHPQISKAWRALSSLSVNNTYLRPGVTPPIDVG-TNDSYSARERST 118
Query: 161 VKVTSST 141
KV SST
Sbjct: 119 AKVISST 125
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp.
lyrata]
Length = 1189
Score = 168 bits (425), Expect = 8e-040
Identities = 90/125 (72%), Positives = 101/125 (80%), Gaps = 6/125 (4%)
Frame = -2
Query: 515 SRTHLPEVEKSKAPPQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRDLAARSI 336
S +HLPEV+K + PQTNWSEH KAL + SSVTK LSS+ LYALESQKP RD++ARSI
Sbjct: 2 SWSHLPEVQKPRG-PQTNWSEHAKALESSSSVTKFLSSNVLYALESQKP---RDMSARSI 57
Query: 335 AFPSVNAHTLAAAHPQIDKAWRVLSNLSINKTYLRP*ITPPVDESCTNGSYSARERSTVK 156
AFPSVN HTL AHPQI KAWR LS+LSIN YLRP +TPP+D+ TNGSYSARE STVK
Sbjct: 58 AFPSVNVHTL--AHPQISKAWRALSSLSINNAYLRPGVTPPIDDGGTNGSYSAREGSTVK 115
Query: 155 VTSST 141
V SST
Sbjct: 116 VISST 120
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 168 bits (423), Expect = 1e-039
Identities = 91/125 (72%), Positives = 101/125 (80%), Gaps = 7/125 (5%)
Frame = -2
Query: 515 SRTHLPEVEKSKAPPQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRDLAARSI 336
SR+HLPEV+K + PQTNWSEH KAL + SSVTK LSS+ LYALESQKP RD+AARSI
Sbjct: 2 SRSHLPEVQKPRG-PQTNWSEHAKALESSSSVTKFLSSNVLYALESQKP---RDMAARSI 57
Query: 335 AFPSVNAHTLAAAHPQIDKAWRVLSNLSINKTYLRP*ITPPVDESCTNGSYSARERSTVK 156
AFPSVN HTL AHPQI KAWR LS+LS+N TYLRP +TPP+D TN SYSARERST K
Sbjct: 58 AFPSVNVHTL--AHPQISKAWRALSSLSVNNTYLRPGVTPPIDVG-TNDSYSARERSTAK 114
Query: 155 VTSST 141
V SST
Sbjct: 115 VISST 119
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1172
Score = 112 bits (280), Expect = 5e-023
Identities = 69/134 (51%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Frame = -2
Query: 509 THLPEVEKSKAP-PQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRDLAARSIA 333
+HLPEV KS+ QTNWS+H KA S+ K + S+FLY+LESQK R++ ARSI
Sbjct: 44 SHLPEVNKSRGHFLQTNWSKHAKAFECIPSLNKFMGSNFLYSLESQKLARDREMGARSIE 103
Query: 332 -FPSVNAHTLAAAHPQIDKAWRVLSNLSINKTYLRP*ITPPVDESCTNGSYSARERSTVK 156
V TL A P+I+KAW L NLSIN TYLRP ITP +D+ T+ S S+ +RSTVK
Sbjct: 104 NIAPVTVQTL--ARPEIEKAWCTLINLSINNTYLRPGITPAIDDGSTDRS-SSTKRSTVK 160
Query: 155 VTSSTR*NFLTSVH 114
VTSS +F H
Sbjct: 161 VTSSADGSFYAHNH 174
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 102 bits (254), Expect = 5e-020
Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
Frame = -2
Query: 521 QMSRTHLPEVEKSKAP-PQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRDLAA 345
+MS +HL EV S++ PQTNW + KA S+ K + S+FLY+LESQK R++AA
Sbjct: 24 KMSGSHLHEVNNSRSHFPQTNWLKVAKAFECIPSLNKFMGSNFLYSLESQKLGRDREMAA 83
Query: 344 RSIA-FPSVNAHTLAAAHPQIDKAWRVLSNLSINKTYLRP*ITPPVDESCTNGSYSARER 168
RSI V TL A PQI+KAW L NLSIN TYLRP ITP +D T+ + S+ +
Sbjct: 84 RSIENIAPVTVQTL--ARPQIEKAWCTLINLSINNTYLRPGITPAIDNDSTSRT-SSTKG 140
Query: 167 STVKVTSSTR*NFLTSVH 114
ST KVTS+ +F H
Sbjct: 141 STFKVTSNADGSFCAHNH 158
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 64 bits (153), Expect = 3e-008
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Frame = -2
Query: 473 PQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRDLAARSIAFPSVNAHTLAAAH 294
P+ NW +H AL SS K LS++FLY+LESQKP R L++ + P
Sbjct: 26 PKVNWLQHANALDNISSGRKFLSANFLYSLESQKPMSMR-LSSCDVQNPQ------RLQS 78
Query: 293 PQIDKAWRVLSNLSI-NKTYLRP*ITPPVDESCTNGSYSARERSTVKVTSS 144
Q++KAW LS L I ++ Y+RP T PV + S + +R T + +S+
Sbjct: 79 SQVEKAWHALSTLQISSRNYIRPGQTGPVKNVSEDLSGNVGQRPTFQSSSN 129
>gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 33057-26178
[Arabidopsis thaliana]
Length = 1031
Score = 60 bits (145), Expect = 2e-007
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = -2
Query: 350 AARSIA-FPSVNAHTLAAAHPQIDKAWRVLSNLSINKTYLRP*ITPPVDESCTNGSYSAR 174
AARSI V TL A PQI+KAW L NLSIN TYLRP ITP +D T+ + S+
Sbjct: 2 AARSIENIAPVTVQTL--ARPQIEKAWCTLINLSINNTYLRPGITPAIDNDSTSRT-SST 58
Query: 173 ERSTVKVTSSTR*NFLTSVH 114
+ ST KVTS+ +F H
Sbjct: 59 KGSTFKVTSNADGSFCAHNH 78
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 55 bits (132), Expect = 8e-006
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Frame = -2
Query: 473 PQTNWSEHVKALGTPSSVTKHLSSSFLYALESQKPRGCRD----LAARSIAFPSVNAHTL 306
P+ NWS+H A+ + + LSSSFL++L +Q+P D L RS A L
Sbjct: 4 PRVNWSDHANAVQSSCIKDEFLSSSFLFSLPTQRPNQEADCTGMLPLRSAACRIQGLERL 63
Query: 305 AAAHPQIDKAWRVLSNLSI-NKTYLRP*ITPPVDESCTNGSYSARERSTVKV 153
A P I+KAWR L N + K YLRP ++ V + ++ +++ S+ V
Sbjct: 64 QA--PSIEKAWRSLRNTQVARKNYLRPGLSGKVKDCDSDHAHTYGTSSSYNV 113
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,498,019,856,450
Number of Sequences: 15229318
Number of Extensions: 2498019856450
Number of Successful Extensions: 628698129
Number of sequences better than 0.0: 0
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