BLASTX 7.6.2
Query= UN20990 /QuerySize=1020
(1019 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 546 1e-155
TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 546 1e-155
TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dep... 533 1e-151
TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 502 3e-142
TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation ... 491 5e-139
TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation ... 312 3e-085
TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation ... 290 2e-078
TAIR9_protein||AT2G45810.1 | Symbols: | DEAD/DEAH box helicase,... 170 1e-042
TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase,... 169 2e-042
TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase,... 169 2e-042
TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase,... 168 7e-042
TAIR9_protein||AT3G61240.2 | Symbols: | DEAD/DEAH box helicase,... 168 7e-042
TAIR9_protein||AT3G22310.1 | Symbols: PMH1, ATRH9 | PMH1 (PUTATI... 132 3e-031
TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase,... 130 2e-030
TAIR9_protein||AT3G22330.1 | Symbols: PMH2 | PMH2 (putative mito... 129 3e-030
TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, ... 123 2e-028
TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEA... 119 4e-027
TAIR9_protein||AT5G63120.1 | Symbols: | ethylene-responsive DEA... 119 4e-027
TAIR9_protein||AT5G26742.1 | Symbols: emb1138 | emb1138 (embryo ... 116 4e-026
TAIR9_protein||AT5G26742.2 | Symbols: emb1138 | emb1138 (embryo ... 116 4e-026
>TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594128 REVERSE
Length = 413
Score = 546 bits (1405), Expect = 1e-155
Identities = 272/279 (97%), Positives = 279/279 (100%)
Frame = +2
Query: 182 MAGSAPEGTQFDARQFDQKLNDVLEGQDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFE 361
MAGSAPEGTQFDARQFDQKLN+VLEGQDEFFTSYD+VH+SFDAMGLQENLLRGIYAYGFE
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFE 60
Query: 362 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSIVQCQALVLAPTRELA 541
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFS++QCQALVLAPTRELA
Sbjct: 61 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELA 120
Query: 542 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 721
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
Sbjct: 121 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 180
Query: 722 NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 901
NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
Sbjct: 181 NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 240
Query: 902 LVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAIT 1018
LVKRDELTLEGIKQFYVNVEKE+W+LETLCDLYETLAIT
Sbjct: 241 LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 279
>TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592586-4594128 REVERSE
Length = 416
Score = 546 bits (1405), Expect = 1e-155
Identities = 272/279 (97%), Positives = 279/279 (100%)
Frame = +2
Query: 182 MAGSAPEGTQFDARQFDQKLNDVLEGQDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFE 361
MAGSAPEGTQFDARQFDQKLN+VLEGQDEFFTSYD+VH+SFDAMGLQENLLRGIYAYGFE
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFE 60
Query: 362 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSIVQCQALVLAPTRELA 541
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFS++QCQALVLAPTRELA
Sbjct: 61 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELA 120
Query: 542 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 721
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD
Sbjct: 121 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 180
Query: 722 NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 901
NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
Sbjct: 181 NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 240
Query: 902 LVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAIT 1018
LVKRDELTLEGIKQFYVNVEKE+W+LETLCDLYETLAIT
Sbjct: 241 LVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 279
>TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dependent
helicase/ translation initiation factor | chr1:20260495-20262018
FORWARD
Length = 413
Score = 533 bits (1371), Expect = 1e-151
Identities = 265/279 (94%), Positives = 275/279 (98%)
Frame = +2
Query: 182 MAGSAPEGTQFDARQFDQKLNDVLEGQDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFE 361
MAGSAPEGTQFD RQFDQ+LN+VL+GQDEFFTSYDEVH+SFDAMGLQENLLRGIYAYGFE
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVLDGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFE 60
Query: 362 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSIVQCQALVLAPTRELA 541
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLD++++QCQALVLAPTRELA
Sbjct: 61 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELA 120
Query: 542 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 721
QQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR D
Sbjct: 121 QQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 180
Query: 722 NIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 901
IKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI
Sbjct: 181 CIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 240
Query: 902 LVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAIT 1018
LVKRDELTLEGIKQFYVNVEKEDW+LETLCDLYETLAIT
Sbjct: 241 LVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT 279
>TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594094 REVERSE
Length = 403
Score = 502 bits (1290), Expect = 3e-142
Identities = 250/256 (97%), Positives = 256/256 (100%)
Frame = +2
Query: 251 LEGQDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 430
LEGQDEFFTSYD+VH+SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA
Sbjct: 14 LEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 73
Query: 431 QSGTGKTATFCSGVLQQLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 610
QSGTGKTATFCSGVLQQLDFS++QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG
Sbjct: 74 QSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 133
Query: 611 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIY 790
GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIY
Sbjct: 134 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIY 193
Query: 791 DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKED 970
DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKE+
Sbjct: 194 DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEE 253
Query: 971 WELETLCDLYETLAIT 1018
W+LETLCDLYETLAIT
Sbjct: 254 WKLETLCDLYETLAIT 269
>TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:27378040-27379593
REVERSE
Length = 415
Score = 491 bits (1262), Expect = 5e-139
Identities = 245/281 (87%), Positives = 265/281 (94%), Gaps = 2/281 (0%)
Frame = +2
Query: 182 MAGSAPEGTQFDARQFDQKLNDVL--EGQDEFFTSYDEVHDSFDAMGLQENLLRGIYAYG 355
MAG A +GTQ+D RQFD K+N +L EG++ F+T+YDEV DSFDAM LQ +LLRGIYAYG
Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60
Query: 356 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSIVQCQALVLAPTRE 535
FEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSGVLQQLD S+VQCQALVLAPTRE
Sbjct: 61 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120
Query: 536 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 715
LAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+L+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
Query: 716 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 895
AD IKMFVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFM+KPV
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240
Query: 896 RILVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAIT 1018
RILVKRDELTLEGIKQFYVNV+KE+W+LETLCDLYETLAIT
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT 281
>TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase,
putative | chr3:6863790-6866242 FORWARD
Length = 409
Score = 312 bits (798), Expect = 3e-085
Identities = 152/240 (63%), Positives = 194/240 (80%)
Frame = +2
Query: 299 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 478
SF+ MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+ V Q
Sbjct: 36 SFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQ 95
Query: 479 QLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 658
+D S + QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L+ GVH
Sbjct: 96 VVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVH 155
Query: 659 VVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 838
VV GTPGRV DM+KR+SLR IK+ +LDE+DEMLSRGFKDQIYD+++ LPP +QV + S
Sbjct: 156 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVS 215
Query: 839 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAIT 1018
AT+P E LE+T KFM++PV+ILVKRDELTLEGIKQF+V VEKE+W+ +TLCDLY+TL IT
Sbjct: 216 ATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTIT 275
>TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:19047960-19049967
FORWARD
Length = 393
Score = 290 bits (740), Expect = 2e-078
Identities = 140/239 (58%), Positives = 183/239 (76%)
Frame = +2
Query: 299 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 478
SFD MG+ + +LRG+Y YG++KPS IQQR +VP KG DVI QAQSGTGKT+ V Q
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 479 QLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 658
++ S + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH
Sbjct: 83 IVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVH 142
Query: 659 VVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 838
V GTPGRV+DM+KR SL+ +K+ VLDE+DEMLS+G KDQIYD+++ LP IQV + S
Sbjct: 143 AVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLIS 202
Query: 839 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAI 1015
AT+P E LE+T KFM+ PVRILVK DELTLEGIKQ+YV+V+KE+W+ +TLCDLY L I
Sbjct: 203 ATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTI 261
>TAIR9_protein||AT2G45810.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:18859836-18862318 FORWARD
Length = 529
Score = 170 bits (430), Expect = 1e-042
Identities = 101/252 (40%), Positives = 146/252 (57%), Gaps = 6/252 (2%)
Frame = +2
Query: 260 QDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 439
+D T +E D F L+ +LLRGIY GFEKPS IQ+ I G D++ +A++G
Sbjct: 146 EDVTATKGNEFEDYF----LKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNG 201
Query: 440 TGKTATFCSGVLQQLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 619
TGKT FC L+++D QA++L PTRELA Q +V + L YL ++V GGTS
Sbjct: 202 TGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTS 261
Query: 620 VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIF 799
+R+D L VH++VGTPGR+ D+ K+ + M V+DEAD++LS F+ I ++
Sbjct: 262 LRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELI 321
Query: 800 QLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWEL 979
Q LP Q+ +FSAT P +++ KP I+ D+LTL G+ Q+Y VE E ++
Sbjct: 322 QFLPESRQILMFSATFPVTVKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVE-ERQKV 379
Query: 980 ETLCDLYETLAI 1015
L L+ L I
Sbjct: 380 HCLNTLFSKLQI 391
>TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 169 bits (428), Expect = 2e-042
Identities = 98/252 (38%), Positives = 148/252 (58%), Gaps = 6/252 (2%)
Frame = +2
Query: 260 QDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 439
+D T +E D F L+ LL GIY GFE+PS IQ+ I G D++ +A++G
Sbjct: 123 EDVTATKGNEFEDYF----LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNG 178
Query: 440 TGKTATFCSGVLQQLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 619
TGKTA FC VL+++D QA+++ PTRELA Q +V + LG +L ++V GGTS
Sbjct: 179 TGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTS 238
Query: 620 VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIF 799
+++D L VH++VGTPGR+ D+ K+ + + V+DEAD++LS+ F+ + +
Sbjct: 239 LKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLI 298
Query: 800 QLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWEL 979
LP Q+ +FSAT P + +F++ P ++ DELTL+GI QFY VE E ++
Sbjct: 299 SFLPESRQILMFSATFPVTVKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVE-ERQKI 356
Query: 980 ETLCDLYETLAI 1015
L L+ L I
Sbjct: 357 HCLNTLFSKLQI 368
>TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 169 bits (428), Expect = 2e-042
Identities = 98/252 (38%), Positives = 148/252 (58%), Gaps = 6/252 (2%)
Frame = +2
Query: 260 QDEFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 439
+D T +E D F L+ LL GIY GFE+PS IQ+ I G D++ +A++G
Sbjct: 123 EDVTATKGNEFEDYF----LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNG 178
Query: 440 TGKTATFCSGVLQQLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 619
TGKTA FC VL+++D QA+++ PTRELA Q +V + LG +L ++V GGTS
Sbjct: 179 TGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTS 238
Query: 620 VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIF 799
+++D L VH++VGTPGR+ D+ K+ + + V+DEAD++LS+ F+ + +
Sbjct: 239 LKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLI 298
Query: 800 QLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWEL 979
LP Q+ +FSAT P + +F++ P ++ DELTL+GI QFY VE E ++
Sbjct: 299 SFLPESRQILMFSATFPVTVKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVE-ERQKI 356
Query: 980 ETLCDLYETLAI 1015
L L+ L I
Sbjct: 357 HCLNTLFSKLQI 368
>TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 168 bits (424), Expect = 7e-042
Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 2/240 (0%)
Frame = +2
Query: 296 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 475
+ F+ L+ +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC VL
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 476 QQLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 655
+++D + QA++L PTRELA Q +V + L YL ++V GGTS+R+D L V
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 656 HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 835
H++VGTPGR+ D+ K+ + M V+DEAD++LS F+ + ++ Q LP Q +F
Sbjct: 244 HLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMF 303
Query: 836 SATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAI 1015
SAT P + + KP ++ D+LTL G+ Q+Y VE E ++ L L+ L I
Sbjct: 304 SATFPVTVKAFKDRHLRKPY-VINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQI 361
>TAIR9_protein||AT3G61240.2 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 168 bits (424), Expect = 7e-042
Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 2/240 (0%)
Frame = +2
Query: 296 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 475
+ F+ L+ +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC VL
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 476 QQLDFSIVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 655
+++D + QA++L PTRELA Q +V + L YL ++V GGTS+R+D L V
Sbjct: 184 EKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 656 HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 835
H++VGTPGR+ D+ K+ + M V+DEAD++LS F+ + ++ Q LP Q +F
Sbjct: 244 HLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMF 303
Query: 836 SATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWELETLCDLYETLAI 1015
SAT P + + KP ++ D+LTL G+ Q+Y VE E ++ L L+ L I
Sbjct: 304 SATFPVTVKAFKDRHLRKPY-VINLMDQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQI 361
>TAIR9_protein||AT3G22310.1 | Symbols: PMH1, ATRH9 | PMH1 (PUTATIVE
MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding /
RNA binding | chr3:7887382-7889806 FORWARD
Length = 611
Score = 132 bits (332), Expect = 3e-031
Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
Frame = +2
Query: 311 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ-LD 487
+G+ +++ + G EK IQ+ + P +G D+I +A++GTGKT F ++ + +
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 488 FSI-----VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 649
F+ Q LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRELNY 237
Query: 650 GVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 829
G+ V VGTPGR+ D++KR +L ++ VLDEAD+ML GF + + I Q LP K Q
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 830 VFSATMPPEALEITRKFMSKPVRI--LVKRDELTLEGIKQFYV 952
+FSATMP +T+K+++ P+ I + D+ +GI + +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSI 340
>TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:19429083-19431617 REVERSE
Length = 761
Score = 130 bits (326), Expect = 2e-030
Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 11/240 (4%)
Frame = +2
Query: 299 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF-CSGVL 475
+F+ G ++ I +EKP+AIQ + + G DVI A++G+GKTA F ++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 476 QQLDFSIVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 643
+D +Q ++ APTRELA QI + G++V A GG S E + L
Sbjct: 289 HIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 644 QAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 823
+AG +VV TPGR+ DMLK ++L VLDEAD M GF+ Q+ I + P Q
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 408
Query: 824 VGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNV-----EKEDWELETL 988
+FSATMP + ++ R+ +S P+R+ V + E I Q VNV EK W LE L
Sbjct: 409 TLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQ-VVNVIPSDAEKLPWLLEKL 467
>TAIR9_protein||AT3G22330.1 | Symbols: PMH2 | PMH2 (putative mitochondrial RNA
helicase 2); ATP binding / ATP-dependent helicase/ helicase/ nucleic
acid binding | chr3:7892641-7895145 FORWARD
Length = 617
Score = 129 bits (324), Expect = 3e-030
Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 12/223 (5%)
Frame = +2
Query: 311 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ-LD 487
+G+ +++ + + G EK IQ+ + P +G D+I +A++GTGKT F ++ + +
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 488 FSIVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQA 649
++ + LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRQLDY 225
Query: 650 GVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 829
GV V VGTPGRV D++KR +L ++ VLDEAD+ML GF + + I + LP K Q
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 830 VFSATMPPEALEITRKFMSKP--VRILVKRDELTLEGIKQFYV 952
+FSATMP +T+K+++ P V ++ D+ +GI + +
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI 328
>TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, putative (RH20)
| chr1:20574634-20577141 FORWARD
Length = 502
Score = 123 bits (307), Expect = 2e-028
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Frame = +2
Query: 299 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 478
SF +G + +L + GF +P+ IQ +G KG D+I A++G+GKT ++ +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 479 QLDFSIVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 643
++ + LVLAPTRELA QI++ G +K GG R L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 644 QAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 823
Q GV +V+ TPGR+ DM++ + + VLDEAD ML GF QI I + P Q
Sbjct: 220 QKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQ 279
Query: 824 VGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWELETLCDLYE 1003
+SAT P E ++++KF+ P ++++ +L + V+V E + L L E
Sbjct: 280 TLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE 339
Query: 1004 TL 1009
+
Sbjct: 340 DI 341
>TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25318967-25322071 REVERSE
Length = 592
Score = 119 bits (297), Expect = 4e-027
Identities = 75/212 (35%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Frame = +2
Query: 302 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 481
F +N+L I GF +P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 482 LDFSIVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 646
+ Q L+LAPTRELA QI++ R G GV+ GG R L+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 647 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 826
GV +V+ TPGR+ DML+ Q + VLDEAD ML GF+ QI I + P Q
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 827 GVFSATMPPEALEITRKFMSKPVRILVKRDEL 922
++SAT P E + R+F+ P + ++ +L
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKAIIGSTDL 378
>TAIR9_protein||AT5G63120.1 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25319798-25322071 REVERSE
Length = 485
Score = 119 bits (297), Expect = 4e-027
Identities = 75/212 (35%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Frame = +2
Query: 302 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 481
F +N+L I GF +P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 482 LDFSIVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 646
+ Q L+LAPTRELA QI++ R G GV+ GG R L+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 647 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 826
GV +V+ TPGR+ DML+ Q + VLDEAD ML GF+ QI I + P Q
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 827 GVFSATMPPEALEITRKFMSKPVRILVKRDEL 922
++SAT P E + R+F+ P + ++ +L
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKAIIGSTDL 378
>TAIR9_protein||AT5G26742.1 | Symbols: emb1138 | emb1138 (embryo defective
1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/
nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSE
Length = 748
Score = 116 bits (288), Expect = 4e-026
Identities = 66/150 (44%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Frame = +2
Query: 512 LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHVVVGTPGRVF 688
LVLAPTRELA+Q+EK ++ YL CV GG S Q L GV VVVGTPGR+
Sbjct: 184 LVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRII 240
Query: 689 DMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEI 868
D+++ +SL+ ++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++
Sbjct: 241 DLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKL 300
Query: 869 TRKFMSKPVRI--LVKRDELTLEGIKQFYV 952
RK++ P+ I + +DE EGIK + +
Sbjct: 301 ARKYLDNPLNIDLVGDQDEKLAEGIKLYAI 330
>TAIR9_protein||AT5G26742.2 | Symbols: emb1138 | emb1138 (embryo defective
1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/
nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSE
Length = 749
Score = 116 bits (288), Expect = 4e-026
Identities = 66/150 (44%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Frame = +2
Query: 512 LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILQAGVHVVVGTPGRVF 688
LVLAPTRELA+Q+EK ++ YL CV GG S Q L GV VVVGTPGR+
Sbjct: 184 LVLAPTRELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRII 240
Query: 689 DMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEI 868
D+++ +SL+ ++ VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++
Sbjct: 241 DLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKL 300
Query: 869 TRKFMSKPVRI--LVKRDELTLEGIKQFYV 952
RK++ P+ I + +DE EGIK + +
Sbjct: 301 ARKYLDNPLNIDLVGDQDEKLAEGIKLYAI 330
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,949,370,268
Number of Sequences: 33410
Number of Extensions: 10949370268
Number of Successful Extensions: 364766074
Number of sequences better than 0.0: 0
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