BLASTX 7.6.2
Query= UN21041 /QuerySize=1417
(1416 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (... 529 2e-150
TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (... 417 1e-116
TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (... 414 8e-116
TAIR9_protein||AT3G19090.1 | Symbols: | RNA-binding protein, pu... 186 3e-047
TAIR9_protein||AT2G43970.1 | Symbols: | La domain-containing pr... 178 8e-045
TAIR9_protein||AT2G43970.2 | Symbols: | La domain-containing pr... 106 6e-023
TAIR9_protein||AT5G21160.1 | Symbols: | La domain-containing pr... 62 6e-010
TAIR9_protein||AT1G79880.1 | Symbols: | La domain-containing pr... 55 1e-007
TAIR9_protein||AT4G32720.1 | Symbols: AtLa1 | AtLa1 (Arabidopsis... 52 8e-007
TAIR9_protein||AT4G32720.2 | Symbols: AtLa1 | AtLa1 (Arabidopsis... 52 8e-007
>TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18758056 FORWARD
Length = 423
Score = 529 bits (1361), Expect = 2e-150
Identities = 277/391 (70%), Positives = 309/391 (79%), Gaps = 26/391 (6%)
Frame = -3
Query: 1276 SEAAEDAIGSIADISQPHPPSGEVDSLPAAGSSDEVVVVSDLTPSDDDFDHLPVEADK-- 1103
+E+++D + ++++I P + D +G D D PVE D
Sbjct: 49 TESSDDVVVNVSEIPNLSPSDDDFDHERNSGED-----------RDQDHGENPVETDGVV 97
Query: 1102 ---DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHA 932
DEL +KIIRQVEYYFSDENLPTDKFLLNAMK+NKKGFVPISTIATFHKMKKLTRDHA
Sbjct: 98 VPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHA 157
Query: 931 LIVSALKESSFLVVSSDEKKVKRLSPLPEVRDPKIFTVLVENLPEDHSEDNIRAIFGKAG 752
LIVSALKESSFLVVS+DEKKVKRLSPLPE+RDPKIFTVLVENLPEDHS +NIR IFGKAG
Sbjct: 158 LIVSALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAG 217
Query: 751 SIKSVSICDPNAAEKSEKGCKKDTFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR 572
SIKSVSICDPNA E+SEKG KK+ FIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR
Sbjct: 218 SIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR 277
Query: 571 VKILEQ-KGKFAQRRPGRKEVDTVKDNTGQVPDQIGGEENKKSNEHEHHRHHRSDTPADN 395
VK+LEQ GKFAQRRP R+EVD KD TG+V DQ GGE+NKK+ EH++HR H SD PAD+
Sbjct: 278 VKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADD 337
Query: 394 DSG----DKSGNKTRSRGRGKRQNHQGNNGHGSSPSTSSSLHHNYNHHHHHVEVSKPPPG 227
D G DK+GNK R G+G+RQNHQG NG G ++SSS H NY H VEVSK PPG
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSS-HPNY----HPVEVSKRPPG 392
Query: 226 PRMPDGTRGFTMGRGKQVPPPTSAQTSHEV* 134
PRMPDGTRGFTMGRGK +PPPTS QTSHEV*
Sbjct: 393 PRMPDGTRGFTMGRGKAIPPPTSTQTSHEV* 423
>TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 417 bits (1071), Expect = 1e-116
Identities = 217/303 (71%), Positives = 243/303 (80%), Gaps = 17/303 (5%)
Frame = -3
Query: 1276 SEAAEDAIGSIADISQPHPPSGEVDSLPAAGSSDEVVVVSDLTPSDDDFDHLPVEADK-- 1103
+E+++D + ++++I P + D +G D D PVE D
Sbjct: 49 TESSDDVVVNVSEIPNLSPSDDDFDHERNSGED-----------RDQDHGENPVETDGVV 97
Query: 1102 ---DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHA 932
DEL +KIIRQVEYYFSDENLPTDKFLLNAMK+NKKGFVPISTIATFHKMKKLTRDHA
Sbjct: 98 VPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHA 157
Query: 931 LIVSALKESSFLVVSSDEKKVKRLSPLPEVRDPKIFTVLVENLPEDHSEDNIRAIFGKAG 752
LIVSALKESSFLVVS+DEKKVKRLSPLPE+RDPKIFTVLVENLPEDHS +NIR IFGKAG
Sbjct: 158 LIVSALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAG 217
Query: 751 SIKSVSICDPNAAEKSEKGCKKDTFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR 572
SIKSVSICDPNA E+SEKG KK+ FIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR
Sbjct: 218 SIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR 277
Query: 571 VKILEQ-KGKFAQRRPGRKEVDTVKDNTGQVPDQIGGEENKKSNEHEHHRHHRSDTPADN 395
VK+LEQ GKFAQRRP R+EVD KD TG+V DQ GGE+NKK+ EH++HR H SD PAD+
Sbjct: 278 VKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADD 337
Query: 394 DSG 386
G
Sbjct: 338 VKG 340
>TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 414 bits (1063), Expect = 8e-116
Identities = 215/303 (70%), Positives = 241/303 (79%), Gaps = 17/303 (5%)
Frame = -3
Query: 1276 SEAAEDAIGSIADISQPHPPSGEVDSLPAAGSSDEVVVVSDLTPSDDDFDHLPVEADK-- 1103
+E+++D + ++++I P + D +G D D PVE D
Sbjct: 49 TESSDDVVVNVSEIPNLSPSDDDFDHERNSGED-----------RDQDHGENPVETDGVV 97
Query: 1102 ---DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHA 932
DEL +KIIRQVEYYFSDENLPTDKFLLNAMK+NKKGFVPISTIATFHKMKKLTRDHA
Sbjct: 98 VPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHA 157
Query: 931 LIVSALKESSFLVVSSDEKKVKRLSPLPEVRDPKIFTVLVENLPEDHSEDNIRAIFGKAG 752
LIVSALKESSFLVVS+DEKKVKRLSPLPE+RDPKIFTVLVENLPEDHS +NIR IFGKAG
Sbjct: 158 LIVSALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAG 217
Query: 751 SIKSVSICDPNAAEKSEKGCKKDTFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR 572
SIKSVSICDPNA E+SEKG KK+ FIRTRLHAFVEYETVEAAEKA TLNNEQDWRNGLR
Sbjct: 218 SIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAVTTLNNEQDWRNGLR 277
Query: 571 VKILEQ-KGKFAQRRPGRKEVDTVKDNTGQVPDQIGGEENKKSNEHEHHRHHRSDTPADN 395
VK+LEQ GKFAQRRP R+EVD KD TG+V DQ GGE+NKK+ EH++HR H SD PAD+
Sbjct: 278 VKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADD 337
Query: 394 DSG 386
G
Sbjct: 338 VKG 340
>TAIR9_protein||AT3G19090.1 | Symbols: | RNA-binding protein, putative |
chr3:6601466-6603709 FORWARD
Length = 456
Score = 186 bits (472), Expect = 3e-047
Identities = 118/317 (37%), Positives = 173/317 (54%), Gaps = 22/317 (6%)
Frame = -3
Query: 1102 DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHALIV 923
D+L+ KI++QVEY F+D +L ++ + + K+ +G+VP+S IA+ K+K LT +H L+
Sbjct: 142 DDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHHLVS 201
Query: 922 SALKESSFLVVSSDEKKVKRLSPLPEVRDPKIF---TVLVENLPEDHSEDNIRAIFGKAG 752
AL+ SS LVVS D KKVKR S + RD + TV+ ENLP+DHS N+ IFG G
Sbjct: 202 LALRSSSKLVVSEDGKKVKRTSQFTD-RDREELQGRTVVAENLPDDHSYQNLEKIFGVVG 260
Query: 751 SIKSVSICDPNAAEKSEKGCKKDTFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLR 572
++K++ IC P + S K D + ++HA +EY+ A+KA LN+E++WR GLR
Sbjct: 261 NVKAIRICHPPESNSSRP--KGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLR 318
Query: 571 VKILEQKGKFAQRRPGRKEVDTVKDNTGQVPDQIGGEENKKSNEHEHHRHHRSDTPADND 392
V++L + + + R + D+ ++P GE++ R H +++ DND
Sbjct: 319 VRLLLRCSPKSVLKNRRNFDGILIDD--ELPSYESGEDSP--------RLHLTESQLDND 368
Query: 391 SGDKS----GNKTRSRGRGK--RQNHQGNNGHGSSPSTSSSLHHNYNHHHHHVEVSKPPP 230
D + K R +GRG+ R G G SL H
Sbjct: 369 GDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTATK 428
Query: 229 GPRMPDGTRGFTMGRGK 179
GPRMPDGTRGFTMGRGK
Sbjct: 429 GPRMPDGTRGFTMGRGK 445
>TAIR9_protein||AT2G43970.1 | Symbols: | La domain-containing protein |
chr2:18205535-18208031 REVERSE
Length = 546
Score = 178 bits (451), Expect = 8e-045
Identities = 112/331 (33%), Positives = 174/331 (52%), Gaps = 27/331 (8%)
Frame = -3
Query: 1090 KKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHALIVSALK 911
+KI+ QVEYYFSD NL T L+ + K+ +G+VPI +A+F K+K + +++ + + L+
Sbjct: 195 QKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQ 254
Query: 910 ESSFLVVSSDEKKVKRLSPLPE--VRDPKIFTVLVENLPEDHSEDNIRAIFGKAGSIKSV 737
S+ L VS D KKV+R+SP+ E + + + ++ ENLPEDH N+ IF GS+K++
Sbjct: 255 NSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNI 314
Query: 736 SICDP-----NAAEKSEKGCKKD-TFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGL 575
C P A + K D T ++HAFVEYE VE AE+A L+ +WR+GL
Sbjct: 315 RTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGL 374
Query: 574 RVKI-LEQKGKFAQRRPGRKEVDTVKDNTGQVPDQIGGEE---NKKSNE-HEHHRHHRSD 410
+V++ L+ + K ++ GR D + D E+ K+S++ H +
Sbjct: 375 KVRLMLKHQTKEPKQGQGRGRKGHDADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQE 434
Query: 409 TPADNDSGD-------KSGNKTRSRGRGKRQNHQG---NNGHGSSPSTSSSLHHNYNHHH 260
P D G+ K N+ R +GRG+ Q HQ NN H + + + + N++HHH
Sbjct: 435 QPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHH 494
Query: 259 HHVEVSKPPPGPRMPDGTRGFTMGRGKQVPP 167
HH ++P P G GKQ PP
Sbjct: 495 HHQVGTQPSNNPM----NNMEQPGMGKQQPP 521
>TAIR9_protein||AT2G43970.2 | Symbols: | La domain-containing protein |
chr2:18205535-18208031 REVERSE
Length = 530
Score = 106 bits (262), Expect = 6e-023
Identities = 51/125 (40%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Frame = -3
Query: 1090 KKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHALIVSALK 911
+KI+ QVEYYFSD NL T L+ + K+ +G+VPI +A+F K+K + +++ + + L+
Sbjct: 195 QKIVNQVEYYFSDLNLATTDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQ 254
Query: 910 ESSFLVVSSDEKKVKRLSPLPE--VRDPKIFTVLVENLPEDHSEDNIRAIFGKAGSIKSV 737
S+ L VS D KKV+R+SP+ E + + + ++ ENLPEDH N+ IF GS+K++
Sbjct: 255 NSAKLFVSEDGKKVRRISPITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNI 314
Query: 736 SICDP 722
C P
Sbjct: 315 RTCQP 319
Score = 50 bits (119), Expect = 2e-006
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Frame = -3
Query: 421 HRSDTPADNDSGD-------KSGNKTRSRGRGKRQNHQG---NNGHGSSPSTSSSLHHNY 272
H + P D G+ K N+ R +GRG+ Q HQ NN H + + + + N+
Sbjct: 415 HMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNH 474
Query: 271 NHHHHHVEVSKPPPGPRMPDGTRGFTMGRGKQVPP 167
+HHHHH ++P P G GKQ PP
Sbjct: 475 HHHHHHQVGTQPSNNPM----NNMEQPGMGKQQPP 505
>TAIR9_protein||AT5G21160.1 | Symbols: | La domain-containing protein /
proline-rich family protein | chr5:7199191-7203879 REVERSE
Length = 827
Score = 62 bits (150), Expect = 6e-010
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = -3
Query: 1108 DKDELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKLTRDHAL 929
+K +L+ ++++QVEYYFSDENL D +L++ M +++G+VP IA F ++K +T D
Sbjct: 274 EKLDLRDRVLKQVEYYFSDENLENDHYLISLM--DEEGWVPTKIIAGFKRVKAMTMDVDF 331
Query: 928 IVSALKESSFLVVSSDE 878
IV AL S+ + V D+
Sbjct: 332 IVYALGFSNSVEVQGDQ 348
>TAIR9_protein||AT1G79880.1 | Symbols: | La domain-containing protein |
chr1:30046222-30048336 REVERSE
Length = 400
Score = 55 bits (131), Expect = 1e-007
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = -3
Query: 1102 DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMKKL 947
+E KK++ QVE+YFSD NLPTD FL + K+K G V + + +F +M+ L
Sbjct: 7 EETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNL 58
>TAIR9_protein||AT4G32720.1 | Symbols: AtLa1 | AtLa1 (Arabidopsis thaliana La
protein 1); RNA binding | chr4:15787313-15789683 FORWARD
Length = 434
Score = 52 bits (123), Expect = 8e-007
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = -3
Query: 1102 DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMK 953
+E K ++RQVE+YFSD NLP D FL + +++ G V ++ I +F KM+
Sbjct: 8 EETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMR 57
>TAIR9_protein||AT4G32720.2 | Symbols: AtLa1 | AtLa1 (Arabidopsis thaliana La
protein 1); RNA binding | chr4:15787313-15789498 FORWARD
Length = 405
Score = 52 bits (123), Expect = 8e-007
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = -3
Query: 1102 DELKKKIIRQVEYYFSDENLPTDKFLLNAMKKNKKGFVPISTIATFHKMK 953
+E K ++RQVE+YFSD NLP D FL + +++ G V ++ I +F KM+
Sbjct: 8 EETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMR 57
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,992,676,032
Number of Sequences: 33410
Number of Extensions: 10992676032
Number of Successful Extensions: 364778864
Number of sequences better than 0.0: 0
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