BLASTX 7.6.2
Query= UN21112 /QuerySize=1186
(1185 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 329 2e-090
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 257 1e-068
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 106 4e-023
TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 82 8e-016
TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |... 67 2e-011
TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility... 65 8e-011
TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding... 59 5e-009
TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding... 59 5e-009
TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding... 59 5e-009
TAIR9_protein||AT4G31880.1 | Symbols: | LOCATED IN: cytosol, ch... 49 4e-006
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 329 bits (843), Expect = 2e-090
Identities = 205/285 (71%), Positives = 217/285 (76%), Gaps = 29/285 (10%)
Frame = +1
Query: 49 MSTEEE--PKVVESGDAEAEAEATVTTTEKKPA----KAKAKKTKEAKKKPAAAAAP-RK 207
MS EEE P V+SG A+ TV + EKKPA K+K T +A KKP AAAP +K
Sbjct: 1 MSIEEENVPTTVDSG----AADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKK 56
Query: 208 RTTSSHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRRLVAS 387
+TTSSHP YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNL+RLVAS
Sbjct: 57 KTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVAS 116
Query: 388 GKLVKVKASFKIPSAKPAAATKPVK--KKPAAAVTKPKGK--AAAAPAKAKPAAKGTKKP 555
KLVKVKASFKIPSA+ AA KP KK A V KPKGK AA APAKAK AAKGTKKP
Sbjct: 117 EKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKP 176
Query: 556 AASAAKPKAKTTTTKAAAKPKVT-AKPKTKSVAAVSKTKAVAAKPKVKERPAKASRTSSR 732
AA KAK T A K KVT AKPK+KSVAAVSKTKAVAAKPK KERPAKASRTS+R
Sbjct: 177 AAKVV-AKAKVT---AKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTR 232
Query: 733 TSPGKK-AAPAKKAAAPAAKKAGASKKAPAKSAKVKSPAKRASTR 864
TSPGKK AAPAKK A +KKAPAKS KVKSPAKRASTR
Sbjct: 233 TSPGKKVAAPAKKVA--------VTKKAPAKSVKVKSPAKRASTR 269
Score = 329 bits (841), Expect = 4e-090
Identities = 202/281 (71%), Positives = 214/281 (76%), Gaps = 27/281 (9%)
Frame = +1
Query: 58 EEEPKVVESGDAEAEAEATVTTTEKKPA----KAKAKKTKEAKKKPAAAAAP-RKRTTSS 222
E P V+SG A+ TV + EKKPA K+K T +A KKP AAAP +K+TTSS
Sbjct: 6 ENVPTTVDSG----AADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSS 61
Query: 223 HPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRRLVASGKLVK 402
HP YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNL+RLVAS KLVK
Sbjct: 62 HPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVK 121
Query: 403 VKASFKIPSAKPAAATKPVK--KKPAAAVTKPKGK--AAAAPAKAKPAAKGTKKPAASAA 570
VKASFKIPSA+ AA KP KK A V KPKGK AA APAKAK AAKGTKKPAA
Sbjct: 122 VKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVV 181
Query: 571 KPKAKTTTTKAAAKPKVT-AKPKTKSVAAVSKTKAVAAKPKVKERPAKASRTSSRTSPGK 747
KAK T A K KVT AKPK+KSVAAVSKTKAVAAKPK KERPAKASRTS+RTSPGK
Sbjct: 182 -AKAKVT---AKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGK 237
Query: 748 K-AAPAKKAAAPAAKKAGASKKAPAKSAKVKSPAKRASTRK 867
K AAPAKK A +KKAPAKS KVKSPAKRASTRK
Sbjct: 238 KVAAPAKKVA--------VTKKAPAKSVKVKSPAKRASTRK 270
Score = 77 bits (188), Expect = 2e-014
Identities = 75/253 (29%), Positives = 102/253 (40%), Gaps = 40/253 (15%)
Frame = +1
Query: 163 KEAKKKPAAAAAPRKRTTSSHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPT 342
K +KKPAA K+TT++ ++ +K A T K+ T S PT
Sbjct: 22 KSPEKKPAAKGGKSKKTTTAKAT-KKPVKAAAPTKKKTTSSH----------------PT 64
Query: 343 FRKLL---LVNLRRLVASG-----KLVKVKASFKIPSAKP---------AAATKPVKKKP 471
+ +++ +V L+ S K ++ K P+ + A+ K VK K
Sbjct: 65 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVK- 123
Query: 472 AAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKAKTTTTKAAAKPKVTAKPKTKSVA 651
A+ P ++AA P A P KK A AKPK K A AK K AK K A
Sbjct: 124 -ASFKIPSARSAATPKPAAP----VKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAA 178
Query: 652 AVSKTKAVAAKPKVKERPAKASRTSSRTSPGKKAAPAKKAAAPAAKKAGASKKAPAKSAK 831
V V AKPK K AK S KA AK A KA + + K
Sbjct: 179 KVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKK 238
Query: 832 VKSPAKRASTRKK 870
V +PAK+ + KK
Sbjct: 239 VAAPAKKVAVTKK 251
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 257 bits (655), Expect = 1e-068
Identities = 159/281 (56%), Positives = 177/281 (62%), Gaps = 22/281 (7%)
Frame = +1
Query: 58 EEEPKVVESGDAEAEAEATVTTTEKKPAK--AKAKKTKEAKKKPAAAAAPRKRTTSSHPP 231
E E G+ A+A T EKKPA K K KE K+K AAAP+KRT SSHP
Sbjct: 5 EIENAATIEGNTAADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPT 64
Query: 232 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRRLVASGKLVKVKA 411
YEEMIKDAIVTLKERTGSSQYAIQKFIEEK K LPPTFRKLLL+NL+RLVASGKLVKVKA
Sbjct: 65 YEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKA 124
Query: 412 SFKIPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPA----AKGTKKPAASAAKPK 579
SFK+PSA A++ P AA K +APAK KPA K +K AA++ K
Sbjct: 125 SFKLPSASAKASS------PKAAAEK------SAPAKKKPATVAVTKAKRKVAAASKAKK 172
Query: 580 AKTTTTKAAAKPKVTAKPKTKSV----AAVSKTKAVAAKPKVKERPAKASRTSSRTSPGK 747
K AA KVTAK K K V AA +K KAV AKPK K RPAKA++T+ TSP K
Sbjct: 173 TIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPAK 232
Query: 748 KAAPAKKAAAPAAKKAGASKKAPAKSAKVKSPAKRASTRKK 870
KA A K A A K K K VKSPAKRAS+R K
Sbjct: 233 KAVAATKKVATVATKKKTPVKKVVKPKTVKSPAKRASSRVK 273
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 106 bits (263), Expect = 4e-023
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 15/159 (9%)
Frame = +1
Query: 175 KKPAAAAAPRKRTTSSHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRK 351
KK AA PRK T++HPPY +MIK+A++ LKE+ GSS YAI K IEEKHKS LP +FRK
Sbjct: 8 KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67
Query: 352 LLLVNLRRLVASGKLVKVKASFKIPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKP 531
L + L+ VA GKLVK++AS+K+ + KK + K
Sbjct: 68 TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDK------------ 115
Query: 532 AAKGTKKPAASAAKPKAKTTTTKAAAKPKVTAKPKTKSV 648
+ TK+ +S+ +PK + K K KV + KS+
Sbjct: 116 --EITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQPKSI 152
>TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846254-7846670 FORWARD
Length = 139
Score = 82 bits (200), Expect = 8e-016
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Frame = +1
Query: 241 MIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLRRLVASGKLVKVKASF 417
MIK+A++ LKE+ GSS YAI K IEEKHKS LP +FRK L + L+ VA GKLVK++AS+
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 418 KIPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKAKTTTT 597
K+ + KK + K + TK+ +S+ +PK +
Sbjct: 61 KLSDTTKMITRQQDKKNKKNMKQEDK--------------EITKRTRSSSTRPKKTVSVN 106
Query: 598 KAAAKPKVTAKPKTKSV 648
K K KV + KS+
Sbjct: 107 KQEKKRKVKKARQPKSI 123
>TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |
chr3:6169384-6171558 REVERSE
Length = 481
Score = 67 bits (162), Expect = 2e-011
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 12/221 (5%)
Frame = +1
Query: 223 HPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRRLVASGKLVK 402
HPPY EMI AI L E GSS+ AI ++IE + L LL +L+ L SG L
Sbjct: 65 HPPYSEMICAAIAALNEPDGSSKMAISRYIERCYTGLTSAHAALLTHHLKTLKTSGVLSM 124
Query: 403 VKASFKIP-SAKPAAATKPVKKKPAAAVTKPKGKAAAA----PAKAKPAAKGTKKPAASA 567
VK S+KI S+ P A+ A + P+ + + P + A++ K+
Sbjct: 125 VKKSYKIAGSSTPPASVAVAAAAAAQGLDVPRSEILHSSNNDPMASGSASQPLKRGRGRP 184
Query: 568 AKPKAKTTTTKAAAKPKVTAKPKTKSVAAVSKTKAVAAKPKVKERPAKASRTSSRTSPGK 747
KPK ++ P T + + + + + P A R R
Sbjct: 185 PKPKPESQPQPLQQLPP-TNQVQANGQPIWEQQQVQSPVPVPTPVTESAKRGPGRPRKNG 243
Query: 748 KAAPAKKAAAPAAKKAGASKKAPAKSAKVKSPAKRASTRKK 870
AAPA A+ AG K+ + + P +RA+ R++
Sbjct: 244 SAAPATAPIVQASVMAGIMKR------RGRPPGRRAAGRQR 278
>TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility Group Family A
5); DNA binding | chr1:17974148-17976301 REVERSE
Length = 480
Score = 65 bits (157), Expect = 8e-011
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Frame = +1
Query: 220 SHPPYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRRLVASGKLV 399
SHPPY +MI AI L E GSS+ AI ++IE + +P LL +L+ L SG LV
Sbjct: 74 SHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILV 133
Query: 400 KVKASFKI---PSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAA 570
VK S+K+ P P + P + P + + + P A + K+
Sbjct: 134 MVKKSYKLASTPPPPPPTSVAPSLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGRPP 193
Query: 571 KPKAKTTTTKAAAKPKVTAKPKTKSVAAVSKTKAVAAKP 687
K K + K+T + +S VS+ + + +P
Sbjct: 194 KAKPDVVQPQPLTNGKLTWE---QSELPVSRPEEIQIQP 229
>TAIR9_protein||AT1G49950.3 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 59 bits (141), Expect = 5e-009
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Frame = +1
Query: 217 SSHPP-------YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRR 375
SS+PP + +I +AI TLKE G ++ I +IE+++ + PP F++LL L+
Sbjct: 109 SSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKY 167
Query: 376 LVASGKLVKVKASFKIPSAKPAAA 447
L + GKLVKVK ++IP++ P ++
Sbjct: 168 LTSCGKLVKVKRKYRIPNSTPLSS 191
>TAIR9_protein||AT1G49950.2 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 59 bits (141), Expect = 5e-009
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Frame = +1
Query: 217 SSHPP-------YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRR 375
SS+PP + +I +AI TLKE G ++ I +IE+++ + PP F++LL L+
Sbjct: 109 SSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKY 167
Query: 376 LVASGKLVKVKASFKIPSAKPAAA 447
L + GKLVKVK ++IP++ P ++
Sbjct: 168 LTSCGKLVKVKRKYRIPNSTPLSS 191
>TAIR9_protein||AT1G49950.1 | Symbols: TRB1, ATTRB1 | DNA-binding protein,
putative | chr1:18494439-18496713 REVERSE
Length = 301
Score = 59 bits (141), Expect = 5e-009
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Frame = +1
Query: 217 SSHPP-------YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLRR 375
SS+PP + +I +AI TLKE G ++ I +IE+++ + PP F++LL L+
Sbjct: 109 SSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKY 167
Query: 376 LVASGKLVKVKASFKIPSAKPAAA 447
L + GKLVKVK ++IP++ P ++
Sbjct: 168 LTSCGKLVKVKRKYRIPNSTPLSS 191
>TAIR9_protein||AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G15940.1);
Has 114836 Blast hits to 56273 proteins in 1914 species: Archae - 187;
Bacteria - 15478; Metazoa - 53116; Fungi - 16017; Plants - 4342;
Viruses - 719; Other Eukaryotes - 24977 (source: NCBI BLink). |
chr4:15419435-15423939 REVERSE
Length = 874
Score = 49 bits (116), Expect = 4e-006
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Frame = +1
Query: 421 IPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKAKTTTTK 600
+P K A K K ++A K A ++ AKA PA+K +K + K +K+ +K
Sbjct: 684 VPLTKKAKTGKQSKMDNSSA--KKGSGAGSSKAKATPASKSSK--TSQDDKTASKSKDSK 739
Query: 601 AAAKPKVTAKPKTKSVAAVSKTKAVAAKPKVKERPAKASRTSSRTSPGKKAAPAKKAAAP 780
A++ + + + KT + + K+ + S++ + KK KA
Sbjct: 740 EASREEEASSEEESEEEEPPKTVGKSGSSRSKKDISSVSKSGKSKASSKKKEEPSKATTS 799
Query: 781 AAKKAGASKKAPAKSAKVKSPAKRAS 858
+ K+G K PAKS K AK S
Sbjct: 800 SKSKSGPVKSVPAKSKTGKGKAKSGS 825
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,013,856,901
Number of Sequences: 33410
Number of Extensions: 11013856901
Number of Successful Extensions: 364783020
Number of sequences better than 0.0: 0
|
