BLASTX 7.6.2
Query= UN21127 /QuerySize=1496
(1495 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-bin... 680 9e-196
TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-bin... 549 3e-156
TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA b... 423 2e-118
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b... 405 5e-113
TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA... 339 3e-093
TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABI... 330 2e-090
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 266 4e-071
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 266 4e-071
TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabi... 243 4e-064
TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-b... 239 5e-063
TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABI... 221 1e-057
>TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917941 FORWARD
Length = 406
Score = 680 bits (1753), Expect = 9e-196
Identities = 328/406 (80%), Positives = 350/406 (86%), Gaps = 11/406 (2%)
Frame = +3
Query: 42 MQHPPPPGGLLPHHVPPPSAQQHYGYQQP---PPYAAPPPQMWNPQ--APPPSQPMTADE 206
M PPPGG+LPHH PPPSAQQ YGYQQP A PPPQMWNPQ APP QP TADE
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADE 60
Query: 207 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERAL 386
IRTLWIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVEGYGFIEF SHAAAER L
Sbjct: 61 IRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 387 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASYP 566
QT+N+ P+P PDQLFRLNWASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+ASYP
Sbjct: 121 QTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 567 SVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSG 746
SVKGAKVVIDR TGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGV+G
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG 240
Query: 747 QRDSYQSAASGVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGF 926
QRDSYQS+A+GV TDNDPNNTTVFVGGLD +VTDDHLKNVFSQYGEIVHVKIPAGKRCGF
Sbjct: 241 QRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGF 300
Query: 927 VQFSEKSCAEEAIRTLNGTQLGGTTVRLSWGRSPSSKQAADPSQYYYGGYGQGREHYGYS 1106
VQFSEKSCAEEA+R LNG QLGGTTVRLSWGRSPS+KQ+ DPSQ+YYGGYGQG+E YGY+
Sbjct: 301 VQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQSGDPSQFYYGGYGQGQEQYGYT 360
Query: 1107 MPQDPNAYYGATLAG------ISSHHSGAATTSAATQQQQVGFSY* 1226
MPQDPNAYYG G + +G QQQQVGFSY*
Sbjct: 361 MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQQVGFSY* 406
>TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917301 FORWARD
Length = 307
Score = 549 bits (1412), Expect = 3e-156
Identities = 263/306 (85%), Positives = 277/306 (90%), Gaps = 5/306 (1%)
Frame = +3
Query: 42 MQHPPPPGGLLPHHVPPPSAQQHYGYQQP---PPYAAPPPQMWNPQ--APPPSQPMTADE 206
M PPPGG+LPHH PPPSAQQ YGYQQP A PPPQMWNPQ APP QP TADE
Sbjct: 1 MMQQPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPPPQMWNPQAAAPPSVQPTTADE 60
Query: 207 IRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERAL 386
IRTLWIGDLQ+WMDE+FLY CFAHTGE++S KVIRNKQT QVEGYGFIEF SHAAAER L
Sbjct: 61 IRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120
Query: 387 QTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVGDLAADVTDYVLLETFKASYP 566
QT+N+ P+P PDQLFRLNWASL SGDKRDDSPDYTIFVGDLAADVTDY+LLETF+ASYP
Sbjct: 121 QTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSPDYTIFVGDLAADVTDYILLETFRASYP 180
Query: 567 SVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSG 746
SVKGAKVVIDR TGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGV+G
Sbjct: 181 SVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVTG 240
Query: 747 QRDSYQSAASGVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGF 926
QRDSYQS+A+GV TDNDPNNTTVFVGGLD +VTDDHLKNVFSQYGEIVHVKIPAGKRCGF
Sbjct: 241 QRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGF 300
Query: 927 VQFSEK 944
VQFSEK
Sbjct: 301 VQFSEK 306
>TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA binding |
chr4:13554983-13557763 REVERSE
Length = 416
Score = 423 bits (1085), Expect = 2e-118
Identities = 220/372 (59%), Positives = 267/372 (71%), Gaps = 24/372 (6%)
Frame = +3
Query: 102 QQHYGYQQPPPYAAPPPQMWNPQAPPPS--------------QPMTADEIRTLWIGDLQF 239
QQ + Q PP WN Q+ P S P +A EIR+LWIGDLQ
Sbjct: 30 QQSWMMQHQQQQQGQPPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQP 89
Query: 240 WMDESFLYSCFAHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERALQTYNSTPVPGL 419
WMDE++L + F TGE + KVIRNKQ EGYGFIEFV+HA AER LQTYN P+P
Sbjct: 90 WMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPS- 148
Query: 420 PDQLFRLNWASLGSGDKRD-DSPDYTIFVGDLAADVTDYVLLETFKASYPSVKGAKVVID 596
+Q FRLNWA LG+G++R + P++T+FVGDLA DVTD++L ETFKA Y SVKGAKVV D
Sbjct: 149 SEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVND 208
Query: 597 RATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSGQRDSYQSAAS 776
R TGR+KGYGFVRF+DESEQIRAMTEMNG CS+RPMR GPAA+KK ++ Q SYQ+
Sbjct: 209 RTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQN-TQ 267
Query: 777 GVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAE 956
G ++DP NTT+FVG +D +VT+D LK+VF Q+GE+VHVKIPAGKRCGFVQ++ ++CAE
Sbjct: 268 GNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAE 327
Query: 957 EAIRTLNGTQLGGTTVRLSWGRSPSSKQA-ADPSQY-----YYGGYGQGREHYGYS-MPQ 1115
+A+ LNGTQLGG ++RLSWGRSPS+KQ D +QY YYG QG E YGY+ PQ
Sbjct: 328 QALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYAPPPQ 387
Query: 1116 DPNAYYGATLAG 1151
DPNAYYG G
Sbjct: 388 DPNAYYGGYAGG 399
>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
45A); RNA binding | chr5:22295412-22298126 FORWARD
Length = 388
Score = 405 bits (1039), Expect = 5e-113
Identities = 210/361 (58%), Positives = 254/361 (70%), Gaps = 14/361 (3%)
Frame = +3
Query: 93 PSAQQH------YGYQQPPPYAAPPPQMWNPQAPPPSQPMTADEIRTLWIGDLQFWMDES 254
PS QQH QQ + P + P +A ++++LWIGDLQ WMDE+
Sbjct: 15 PSGQQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQWMDEN 74
Query: 255 FLYSCFAHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERALQTYNSTPVPGLPDQLF 434
++ S FA +GE S KVIRNK T Q EGYGFIEFVSH+ AER LQTYN P+P +Q F
Sbjct: 75 YIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPS-TEQTF 133
Query: 435 RLNWASLGSGDKR--DDSPDYTIFVGDLAADVTDYVLLETFKASYPSVKGAKVVIDRATG 608
RLNWA G+G+KR + PD+TIFVGDLA +VTDY+L +TFK Y SVKGAKVV+DR TG
Sbjct: 134 RLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTG 193
Query: 609 RTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSGQRDSYQSAASGVPT 788
R+KGYGFVRF+DE+EQ+RAMTEMNG CSTRPMRIGPAA+K + Q YQ+
Sbjct: 194 RSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAG 253
Query: 789 DNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEAIR 968
DNDPNNTT+FVGGLD VTDD LK++F Q+GE++HVKIP GKRCGFVQ++ K+ AE A+
Sbjct: 254 DNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALS 313
Query: 969 TLNGTQLGGTTVRLSWGRSPS--SKQAADPSQYYYGGYGQGREHYGYSM---PQDPNAYY 1133
LNGTQLGG ++RLSWGRSP+ S QA YYG Q + YGY+ QDPNAYY
Sbjct: 314 VLNGTQLGGQSIRLSWGRSPNKQSDQAQWNGGGYYGYPPQPQGGYGYAAQPPTQDPNAYY 373
Query: 1134 G 1136
G
Sbjct: 374 G 374
>TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA-binding
protein 47C'); RNA binding | chr1:17432682-17434805 FORWARD
Length = 435
Score = 339 bits (869), Expect = 3e-093
Identities = 193/386 (50%), Positives = 243/386 (62%), Gaps = 27/386 (6%)
Frame = +3
Query: 39 TMQHPPPPGGLLPHHVPPPSAQQHYGYQQPPPYAAPPPQMW-------NPQAPPPSQPMT 197
T PPPP + PP Y PPP P + + Q
Sbjct: 43 TSPTPPPPHWMR----YPPVLMPQMMYAPPPPMPFSPYHQYPNHHHFHHQSRGNKHQNAF 98
Query: 198 ADEIRTLWIGDLQFWMDESFLYSCF--AHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAA 371
E +T+W+GDLQ WMDE++L S F A E++S+KVIRNK EGYGF+EF SH
Sbjct: 99 NGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDV 158
Query: 372 AERALQTYNSTPVPGLPDQLFRLNWASLGSGDKR--DDSPDYTIFVGDLAADVTDYVLLE 545
A++ LQ +N P+P DQ FRLNWAS +G+KR ++ PD +IFVGDLA DV+D +L E
Sbjct: 159 ADKVLQEFNGAPMPN-TDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHE 217
Query: 546 TFKASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAA 725
TF YPSVK AKVV+D TGR+KGYGFVRF DE+E+ +AMTEMNGV CS+R MRIGPA
Sbjct: 218 TFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPAT 277
Query: 726 SKKGVSG--QRDSYQSAASGVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVK 899
+K +G Q+ Y + + ++ D NTT+FVGGLD +VTD+ LK FS++GEIV VK
Sbjct: 278 PRK-TNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVK 336
Query: 900 IPAGKRCGFVQFSEKSCAEEAIRTLNGTQLGGTTVRLSWGRSPSSKQAADP--SQY---Y 1064
IP GK CGFVQF + AEEA+ LNGT +G TVRLSWGR+P++KQ D +Q+ Y
Sbjct: 337 IPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPY 396
Query: 1065 YGGYGQGREHYGYSMPQ-DPNAYYGA 1139
YG GQ YGY +PQ DP Y A
Sbjct: 397 YG--GQFYNGYGYMVPQPDPRMYPAA 420
>TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17427182 FORWARD
Length = 433
Score = 330 bits (844), Expect = 2e-090
Identities = 189/378 (50%), Positives = 241/378 (63%), Gaps = 31/378 (8%)
Frame = +3
Query: 57 PPGGLLPH---HVPPPSAQQHYGYQQPPPYAAPP--PQMWNPQAPPPSQPMTADEIRTLW 221
PP ++PH + PPP PPY P + + Q E +T+W
Sbjct: 55 PPTVIIPHQMMYAPPPF----------PPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIW 104
Query: 222 IGDLQFWMDESFLYSCFA--HTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERALQTY 395
+GDL WMDE++L S FA E++SVKVIRNK EGYGF+EF SH A++ L+ +
Sbjct: 105 VGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREF 164
Query: 396 NSTPVPGLPDQLFRLNWASLGSGDKR--DDSPDYTIFVGDLAADVTDYVLLETFKASYPS 569
N T +P DQ FRLNWAS +G+KR ++ PD +IFVGDL+ DV+D +L ETF YPS
Sbjct: 165 NGTTMPN-TDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPS 223
Query: 570 VKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSG- 746
VK AKVV+D TGR+KGYGFVRF DE+E+ +AMTEMNGV CS+R MRIGPA +K +G
Sbjct: 224 VKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK-TNGY 282
Query: 747 -QRDSYQSAASGVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCG 923
Q+ Y + + D NTT+FVGGLD +VTD+ LK F+++GEIV VKIP GK CG
Sbjct: 283 QQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCG 342
Query: 924 FVQFSEKSCAEEAIRTLNGTQLGGTTVRLSWGRSPSSKQAADP--SQY---YYGGYGQGR 1088
FVQF + AEEA+ LNGT +G TVRLSWGR+P++KQ D +Q+ YYG GQ
Sbjct: 343 FVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG--GQFY 400
Query: 1089 EHYGYSMPQ-DPNAYYGA 1139
YGY +PQ DP Y A
Sbjct: 401 NGYGYMVPQPDPRMYPAA 418
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 266 bits (678), Expect = 4e-071
Identities = 131/202 (64%), Positives = 157/202 (77%), Gaps = 4/202 (1%)
Frame = +3
Query: 156 MWNPQAPPPS---QPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTS 326
M +P PP P T +E+RTLWIGDLQ+W+DE++L SCF+ TGE++SVKVIRNK T
Sbjct: 3 MMHPPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITG 62
Query: 327 QVEGYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVG 506
Q EGYGFIEF+SHAAAER LQTYN T +PG + FRLNWAS GSG K D PD++IFVG
Sbjct: 63 QPEGYGFIEFISHAAAERTLQTYNGTQMPG-TELTFRLNWASFGSGQKVDAGPDHSIFVG 121
Query: 507 DLAADVTDYVLLETFKASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGV 686
DLA DVTDY+L ETF+ Y SV+GAKVV D +TGR+KGYGFV+F++ESE+ RAM EMNG+
Sbjct: 122 DLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGL 181
Query: 687 PCSTRPMRIGPAASKKGVSGQR 752
CSTRPMRI A KK V Q+
Sbjct: 182 YCSTRPMRISAATPKKNVGVQQ 203
Score = 107 bits (267), Expect = 2e-023
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Frame = +3
Query: 783 PTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEA 962
P ++D TT+ V LD VT++ LK FSQ GE+++VKIPA K G+VQF + AEEA
Sbjct: 229 PPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEA 288
Query: 963 IRTLNGTQLGGTTVRLSWGRSPSSK---QAADPSQYY-YGGYGQGREHYGYSMPQDPNAY 1130
++ + G +G VR+SW ++P ADP+Q+ Y GYGQG + Y Y QDP+ Y
Sbjct: 289 VQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVY 348
Query: 1131 -YG 1136
YG
Sbjct: 349 AYG 351
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 266 bits (678), Expect = 4e-071
Identities = 131/202 (64%), Positives = 157/202 (77%), Gaps = 4/202 (1%)
Frame = +3
Query: 156 MWNPQAPPPS---QPMTADEIRTLWIGDLQFWMDESFLYSCFAHTGEVLSVKVIRNKQTS 326
M +P PP P T +E+RTLWIGDLQ+W+DE++L SCF+ TGE++SVKVIRNK T
Sbjct: 3 MMHPPQPPQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITG 62
Query: 327 QVEGYGFIEFVSHAAAERALQTYNSTPVPGLPDQLFRLNWASLGSGDKRDDSPDYTIFVG 506
Q EGYGFIEF+SHAAAER LQTYN T +PG + FRLNWAS GSG K D PD++IFVG
Sbjct: 63 QPEGYGFIEFISHAAAERTLQTYNGTQMPG-TELTFRLNWASFGSGQKVDAGPDHSIFVG 121
Query: 507 DLAADVTDYVLLETFKASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGV 686
DLA DVTDY+L ETF+ Y SV+GAKVV D +TGR+KGYGFV+F++ESE+ RAM EMNG+
Sbjct: 122 DLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGL 181
Query: 687 PCSTRPMRIGPAASKKGVSGQR 752
CSTRPMRI A KK V Q+
Sbjct: 182 YCSTRPMRISAATPKKNVGVQQ 203
Score = 107 bits (267), Expect = 2e-023
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Frame = +3
Query: 783 PTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEA 962
P ++D TT+ V LD VT++ LK FSQ GE+++VKIPA K G+VQF + AEEA
Sbjct: 225 PPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEA 284
Query: 963 IRTLNGTQLGGTTVRLSWGRSPSSK---QAADPSQYY-YGGYGQGREHYGYSMPQDPNAY 1130
++ + G +G VR+SW ++P ADP+Q+ Y GYGQG + Y Y QDP+ Y
Sbjct: 285 VQRMQGQVIGQQAVRISWSKNPGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVY 344
Query: 1131 -YG 1136
YG
Sbjct: 345 AYG 347
>TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabidopsis thaliana
RNA-binding protein 47a); RNA binding | chr1:18357236-18360150 REVERSE
Length = 446
Score = 243 bits (618), Expect = 4e-064
Identities = 130/240 (54%), Positives = 166/240 (69%), Gaps = 10/240 (4%)
Frame = +3
Query: 69 LLPHHVPPPSAQQHYGYQQPP--PYAA--PPPQMWNPQAPPPSQPMTADEIRTLWIGDLQ 236
+ PH P + YQQ P YAA Q + P D+++TLW+GDL
Sbjct: 70 MYPH--PQYAPYNQAAYQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLL 127
Query: 237 FWMDESFLYSCFAHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERALQTYNSTPVPG 416
WMDE++L++CF+HT EV SVKVIRNKQT Q EGYGF+EF+S +AAE ALQ+++ +P
Sbjct: 128 HWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPN 187
Query: 417 LPDQLFRLNWASLGSGDKR--DDSPDYTIFVGDLAADVTDYVLLETFKASYPSVKGAKVV 590
+Q FRLNWAS +G+KR ++ PD +IFVGDLA DV+D VLLETF YPSVKGAKVV
Sbjct: 188 -AEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVV 246
Query: 591 IDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVS-GQRDSYQS 767
ID TGR+KGYGFVRF DE+E+ RAMTEMNG CS+R MR+G A K+ + GQ++ Q+
Sbjct: 247 IDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQA 306
Score = 127 bits (318), Expect = 2e-029
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = +3
Query: 774 SGVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCA 953
+G +D + NN+T+FVGGLD VT++ L FS +GE+V VKIP GK CGFVQF+ + A
Sbjct: 316 NGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSA 375
Query: 954 EEAIRTLNGTQLGGTTVRLSWGRSPSSKQAADPSQYYYGGYGQGREHYGYSMPQDPNAYY 1133
EEAI LNGT +G TVRLSWGRSP+ + +D + GGY +G+ + QD N Y
Sbjct: 376 EEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWNGGYSRGQGYNNGYANQDSNMYA 435
Query: 1134 GATLA 1148
A A
Sbjct: 436 TAAAA 440
>TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-binding protein
47B); RNA binding | chr3:6611398-6613823 REVERSE
Length = 436
Score = 239 bits (608), Expect = 5e-063
Identities = 123/236 (52%), Positives = 158/236 (66%), Gaps = 4/236 (1%)
Frame = +3
Query: 69 LLPHHVPPPSAQQHYGYQQPPPYAAPPPQMWNPQAPPPSQPMTADEIRTLWIGDLQFWMD 248
+ PH P + Q Y P + Q Q + D+++TLW+GDL WMD
Sbjct: 62 MYPHQYVPYN-QGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLHWMD 120
Query: 249 ESFLYSCFAHTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERALQTYNSTPVPGLPDQ 428
E++L+SCF+HTGEV SVKVIRNK TSQ EGYGF+EF+S AAAE LQ Y+ + +P DQ
Sbjct: 121 ETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPN-SDQ 179
Query: 429 LFRLNWASLGSGDKR--DDSPDYTIFVGDLAADVTDYVLLETFKASYPSVKGAKVVIDRA 602
FR+NWAS +G+KR ++ PD ++FVGDL+ DVTD +L ETF YPSVK AKVVID
Sbjct: 180 PFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSN 239
Query: 603 TGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSGQRDSYQSA 770
TGR+KGYGFVRF DE+E+ RA+TEMNG CS R MR+G A K+ ++ Q+ A
Sbjct: 240 TGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQA 295
Score = 134 bits (337), Expect = 1e-031
Identities = 65/136 (47%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Frame = +3
Query: 738 VSGQRDSYQSAASGVPTDNDPNNTTVFVGGLDPTVTDDHLKNVFSQYGEIVHVKIPAGKR 917
++G S S G +D + N T+FVGG+DP V D+ L+ FSQ+GE+V VKIP GK
Sbjct: 298 LAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKG 357
Query: 918 CGFVQFSEKSCAEEAIRTLNGTQLGGTTVRLSWGRSPSSKQAADPSQYYYGGYGQGREHY 1097
CGFVQF+++ AE+AI +LNGT +G TVRLSWGRSP+ + D Q + GGY +G +
Sbjct: 358 CGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWNGGYSRGHGYN 417
Query: 1098 ---GYSMPQDPNAYYG 1136
GY+ D N Y+G
Sbjct: 418 NGGGYANHHDSNNYHG 433
>TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17426114 FORWARD
Length = 311
Score = 221 bits (561), Expect = 1e-057
Identities = 127/266 (47%), Positives = 164/266 (61%), Gaps = 23/266 (8%)
Frame = +3
Query: 57 PPGGLLPH---HVPPPSAQQHYGYQQPPPYAAPP--PQMWNPQAPPPSQPMTADEIRTLW 221
PP ++PH + PPP PPY P + + Q E +T+W
Sbjct: 55 PPTVIIPHQMMYAPPPF----------PPYHQYPNHHHLHHQSRGNKHQNAFNGENKTIW 104
Query: 222 IGDLQFWMDESFLYSCFA--HTGEVLSVKVIRNKQTSQVEGYGFIEFVSHAAAERALQTY 395
+GDL WMDE++L S FA E++SVKVIRNK EGYGF+EF SH A++ L+ +
Sbjct: 105 VGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREF 164
Query: 396 NSTPVPGLPDQLFRLNWASLGSGDKR--DDSPDYTIFVGDLAADVTDYVLLETFKASYPS 569
N T +P DQ FRLNWAS +G+KR ++ PD +IFVGDL+ DV+D +L ETF YPS
Sbjct: 165 NGTTMPN-TDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPS 223
Query: 570 VKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVSG- 746
VK AKVV+D TGR+KGYGFVRF DE+E+ +AMTEMNGV CS+R MRIGPA +K +G
Sbjct: 224 VKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK-TNGY 282
Query: 747 -QRDSYQSAASGVPTDNDPNNTTVFV 821
Q+ Y + + D NTTV V
Sbjct: 283 QQQGGYMPNGTLTRPEGDIMNTTVIV 308
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,036,619,771
Number of Sequences: 33410
Number of Extensions: 11036619771
Number of Successful Extensions: 364787200
Number of sequences better than 0.0: 0
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