BLASTX 7.6.2
Query= UN21173 /QuerySize=1324
(1323 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G20930.1 | Symbols: | RNA recognition motif (... 375 4e-104
TAIR9_protein||AT1G73530.1 | Symbols: | RNA recognition motif (... 92 7e-019
TAIR9_protein||AT1G32580.1 | Symbols: | plastid developmental p... 89 7e-018
TAIR9_protein||AT2G33430.1 | Symbols: DAL1, DAL | DAL1 (DIFFEREN... 86 5e-017
TAIR9_protein||AT2G35240.1 | Symbols: | plastid developmental p... 81 2e-015
TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, pu... 79 6e-015
TAIR9_protein||AT4G20030.1 | Symbols: | RNA recognition motif (... 79 8e-015
TAIR9_protein||AT2G37510.1 | Symbols: | RNA-binding protein, pu... 78 1e-014
TAIR9_protein||AT2G27330.1 | Symbols: | RNA recognition motif (... 77 3e-014
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 74 1e-013
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 74 1e-013
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 74 1e-013
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 74 1e-013
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 69 6e-012
TAIR9_protein||AT1G11430.1 | Symbols: | plastid developmental p... 66 5e-011
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 65 9e-011
>TAIR9_protein||AT3G20930.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:7331739-7333749 FORWARD
Length = 375
Score = 375 bits (962), Expect = 4e-104
Identities = 187/209 (89%), Positives = 195/209 (93%), Gaps = 3/209 (1%)
Frame = +3
Query: 543 GVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWESE 722
GVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSW+S+
Sbjct: 164 GVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSD 223
Query: 723 YGFCCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDY*GDNSRQDSR--ESSESPPVKTK 896
+GFCCDLDE+ A ELAGVPGVLAVVPDN+FESLNKDY GD S QDSR + SESPPVKTK
Sbjct: 224 FGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGD-STQDSRDQDDSESPPVKTK 282
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAA ALKE
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 1077 MNGKIINGWMIVVDVAKTKPLRHNRRETS 1163
MNGKIINGWMIVVDVAKTKP R NR + S
Sbjct: 343 MNGKIINGWMIVVDVAKTKPFRQNRSQPS 371
Score = 213 bits (541), Expect = 3e-055
Identities = 114/160 (71%), Positives = 128/160 (80%), Gaps = 9/160 (5%)
Frame = +1
Query: 85 ASASFFLPICNSSS----YNRLFPCSSYSPNKKLGTFRKNHLSFSSHLVYSSSAVS---T 243
AS SFF+PI NSSS NR FP S YSPN GTFRK LS SSHLV+SSSA+S +
Sbjct: 6 ASTSFFVPISNSSSSHIINNRFFP-SFYSPNLNFGTFRKTSLS-SSHLVFSSSAISAPPS 63
Query: 244 SNTLSRNTYWMVILDRPPQRVSSKSDIVDYYVEILAKVLGNEKDAQMSIYDASFDTHFGF 423
S L+RN+YWMV+LD+PP VSSKS +VDYYVEILAKVLGNEKDAQ+SIYDASFDTHFGF
Sbjct: 64 STVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGF 123
Query: 424 SCHIDEDASRHLARLPEVLSVRPEADYSSGNKNYGIGTRQ 543
CHIDEDASR LA LP V+S+RPE DYSS KNYGIG+ +
Sbjct: 124 CCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHK 163
Score = 92 bits (228), Expect = 5e-019
Identities = 38/86 (44%), Positives = 64/86 (74%)
Frame = +3
Query: 576 HWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWESEYGFCCDLDEKC 755
+WMV +DKP + +K+ MVD+ V++L+KVL NEKDAQ+ +Y S+++ +GFCC +DE
Sbjct: 72 YWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDA 131
Query: 756 AEELAGVPGVLAVVPDNNFESLNKDY 833
+ +LA +PGV+++ P+ ++ S K+Y
Sbjct: 132 SRQLASLPGVVSIRPEQDYSSEKKNY 157
Score = 84 bits (207), Expect = 1e-016
Identities = 39/86 (45%), Positives = 61/86 (70%)
Frame = +1
Query: 268 YWMVILDRPPQRVSSKSDIVDYYVEILAKVLGNEKDAQMSIYDASFDTHFGFSCHIDEDA 447
+WMV +D+P + +K+ +VD+ V++L+KVL NEKDAQM +Y S+ + FGF C +DE +
Sbjct: 175 HWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERS 234
Query: 448 SRHLARLPEVLSVRPEADYSSGNKNY 525
+ LA +P VL+V P+ + S NK+Y
Sbjct: 235 AVELAGVPGVLAVVPDNSFESLNKDY 260
>TAIR9_protein||AT1G73530.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:27643801-27645386 REVERSE
Length = 182
Score = 92 bits (227), Expect = 7e-019
Identities = 45/96 (46%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
Frame = +3
Query: 858 SRESSESPPVKTK----KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGY 1025
S +SS SPP + KL+++GLSF T+E TLR FE FG L+ + ++MDK++ R KG+
Sbjct: 61 STDSSSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGF 120
Query: 1026 AFIEYTTEEAASVALKEMNGKIINGWMIVVDVAKTK 1133
AF+ Y TEE A A++ M+GK ++G +I V+ AKT+
Sbjct: 121 AFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTR 156
>TAIR9_protein||AT1G32580.1 | Symbols: | plastid developmental protein DAG,
putative | chr1:11784108-11785430 FORWARD
Length = 230
Score = 89 bits (218), Expect = 7e-018
Identities = 40/94 (42%), Positives = 65/94 (69%)
Frame = +3
Query: 552 LFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWESEYGF 731
LF +HW++ +DKPG TK QM+D VQ L+K++ +E++A+ +Y+VS E +GF
Sbjct: 87 LFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGF 146
Query: 732 CCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDY 833
C++DE+ + +L G+PGVL ++PD+ + NKDY
Sbjct: 147 GCEIDEETSNKLEGLPGVLFILPDSYVDQENKDY 180
>TAIR9_protein||AT2G33430.1 | Symbols: DAL1, DAL | DAL1 (DIFFERENTIATION AND
GREENING-LIKE 1) | chr2:14162732-14164729 FORWARD
Length = 220
Score = 86 bits (211), Expect = 5e-017
Identities = 41/94 (43%), Positives = 64/94 (68%)
Frame = +3
Query: 552 LFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWESEYGF 731
LF +HW++ +DKPG TK QM+D +Q L+KV+ +E++A+ +Y+VS E GF
Sbjct: 78 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 137
Query: 732 CCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDY 833
C++DE+ + +L G+PGVL V+PD+ + NKDY
Sbjct: 138 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
Score = 80 bits (196), Expect = 3e-015
Identities = 34/87 (39%), Positives = 58/87 (66%)
Frame = +1
Query: 268 YWMVILDRPPQRVSSKSDIVDYYVEILAKVLGNEKDAQMSIYDASFDTHFGFSCHIDEDA 447
+W++++D+P ++K ++D Y++ LAKV+G+E++A+ IY+ S + + GF C IDE+
Sbjct: 86 HWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGFGCEIDEET 145
Query: 448 SRHLARLPEVLSVRPEADYSSGNKNYG 528
S L LP VL V P++ NK+YG
Sbjct: 146 STKLEGLPGVLFVLPDSYVDPENKDYG 172
>TAIR9_protein||AT2G35240.1 | Symbols: | plastid developmental protein DAG,
putative | chr2:14845099-14846262 REVERSE
Length = 233
Score = 81 bits (198), Expect = 2e-015
Identities = 38/94 (40%), Positives = 63/94 (67%)
Frame = +3
Query: 552 LFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWESEYGF 731
LF +HW++ ++KPG K QM+D VQ L+K++ +E++A+ +Y+VS E +GF
Sbjct: 90 LFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVSCERYFGF 149
Query: 732 CCDLDEKCAEELAGVPGVLAVVPDNNFESLNKDY 833
C++DE+ + +L G+PGVL V+PD+ + KDY
Sbjct: 150 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDY 183
>TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, putative |
chr5:1878497-1879515 FORWARD
Length = 147
Score = 79 bits (193), Expect = 6e-015
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
KLFI GLSF T+E+ L AF G++VE +I+MD++S RSKG+ F+ + + + A AL E
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94
Query: 1077 MNGKIINGWMIVVDVAKTK 1133
NG+ +NG I VD AK K
Sbjct: 95 FNGQQLNGRTIFVDYAKAK 113
>TAIR9_protein||AT4G20030.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:10846362-10847246 FORWARD
Length = 153
Score = 79 bits (192), Expect = 8e-015
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
K+ + L F TSE L+ F FGE+ EVK+I D+ KRSKGYAFI++T+++ A +A++
Sbjct: 41 KIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIET 100
Query: 1077 MNGKIINGWMIVVDVAK 1127
M+ ++ NG MI +D+AK
Sbjct: 101 MDRRMYNGRMIYIDIAK 117
>TAIR9_protein||AT2G37510.1 | Symbols: | RNA-binding protein, putative |
chr2:15743112-15744504 REVERSE
Length = 143
Score = 78 bits (190), Expect = 1e-014
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
+LF++GLS T+ + L+ AF FG+LV+ ++I D+ S RSKG+ F+ Y T E A A E
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94
Query: 1077 MNGKIINGWMIVVDVAKTKPLR 1142
MN K ++GW+I VD A+ + R
Sbjct: 95 MNAKFLDGWVIFVDPARPREPR 116
>TAIR9_protein||AT2G27330.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:11695350-11696563 REVERSE
Length = 117
Score = 77 bits (187), Expect = 3e-014
Identities = 34/87 (39%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = +3
Query: 900 LFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKEM 1079
LF+ G+SF ++E+TL AF +G++++V +IMDKI R KG+A++ ++++E A AL E+
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKALLEL 82
Query: 1080 NGKIINGWMIVVDVAKTKPLRHNRRET 1160
N ++++G ++++D TK +HN +T
Sbjct: 83 NAQLVDGRVVILDT--TKAAKHNPPDT 107
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 74 bits (181), Expect = 1e-013
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
KLFI GLS+ T + +LR AF FG++V+ K+I+D+ + RS+G+ F+ + E AA+ A+ E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 1077 MNGKIINGWMIVVDVAKTKP 1136
M+GK +NG I V+ A +P
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 74 bits (181), Expect = 1e-013
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
KLFI GLS+ T + +LR AF FG++V+ K+I+D+ + RS+G+ F+ + E AA+ A+ E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 1077 MNGKIINGWMIVVDVAKTKP 1136
M+GK +NG I V+ A +P
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 74 bits (181), Expect = 1e-013
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
KLFI GLS+ T + +LR AF FG++V+ K+I+D+ + RS+G+ F+ + E AA+ A+ E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 1077 MNGKIINGWMIVVDVAKTKP 1136
M+GK +NG I V+ A +P
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 74 bits (181), Expect = 1e-013
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
KLFI GLS+ T + +LR AF FG++V+ K+I+D+ + RS+G+ F+ + E AA+ A+ E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 1077 MNGKIINGWMIVVDVAKTKP 1136
M+GK +NG I V+ A +P
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 69 bits (167), Expect = 6e-012
Identities = 29/83 (34%), Positives = 59/83 (71%)
Frame = +3
Query: 885 VKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASV 1064
+ + KLFI G+++ E +LR AF +GE+V+ ++I+D+ + RS+G+ F+ +T+ EAAS
Sbjct: 37 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 96
Query: 1065 ALKEMNGKIINGWMIVVDVAKTK 1133
A++ ++G+ ++G ++ V+ A +
Sbjct: 97 AIQALDGRDLHGRVVKVNYANDR 119
>TAIR9_protein||AT1G11430.1 | Symbols: | plastid developmental protein DAG,
putative | chr1:3847273-3848938 FORWARD
Length = 233
Score = 66 bits (159), Expect = 5e-011
Identities = 32/89 (35%), Positives = 55/89 (61%)
Frame = +3
Query: 576 HWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWESEYGFCCDLDEKC 755
HW++ ++ P ++ QM+D + L+ VL + ++A+ +Y S + GF C +DE+
Sbjct: 89 HWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEET 148
Query: 756 AEELAGVPGVLAVVPDNNFESLNKDY*GD 842
+E+ G+PGVL V+PD+ + NKDY GD
Sbjct: 149 SEKFKGLPGVLWVLPDSYIDVKNKDYGGD 177
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 65 bits (157), Expect = 9e-011
Identities = 29/79 (36%), Positives = 56/79 (70%)
Frame = +3
Query: 897 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASVALKE 1076
+ F+ GL++ T+++ L+ F FG++++ KII D+ S RS+G+ F+ + E+A A++E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 1077 MNGKIINGWMIVVDVAKTK 1133
MNGK ++G +I V+ A+++
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,036,619,771
Number of Sequences: 33410
Number of Extensions: 11036619771
Number of Successful Extensions: 364787200
Number of sequences better than 0.0: 0
|
