BLASTX 7.6.2
Query= UN21252 /QuerySize=1068
(1067 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 7e-027
TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 7e-027
TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 7e-027
TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 ... 118 7e-027
TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2... 76 4e-014
TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2... 73 3e-013
>TAIR9_protein||AT2G41430.3 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270098
FORWARD
Length = 121
Score = 118 bits (295), Expect = 7e-027
Identities = 55/61 (90%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = -1
Query: 662 MAMVSGGRSTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QHQGADGFYD 486
MAMVSG RSTLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 485 S 483
+
Sbjct: 61 N 61
>TAIR9_protein||AT2G41430.1 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 118 bits (295), Expect = 7e-027
Identities = 55/61 (90%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = -1
Query: 662 MAMVSGGRSTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QHQGADGFYD 486
MAMVSG RSTLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 485 S 483
+
Sbjct: 61 N 61
Score = 89 bits (220), Expect = 3e-018
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Frame = -1
Query: 446 DFDDMEDLFVADEFDVEIYHAG----GLGKNGEMVRRSRGNRSPKLIVEPAKYSEKPAKW 279
DF D + FD +Y+ G GKNGEMV++S GNRSP+ IVEPAKY+EKPAKW
Sbjct: 88 DFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGNRSPRSIVEPAKYAEKPAKW 147
Query: 278 ANQRV-AVPRNIHQPR* 231
NQRV A PRNIHQPR*
Sbjct: 148 GNQRVAAAPRNIHQPR* 164
>TAIR9_protein||AT2G41430.4 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 118 bits (295), Expect = 7e-027
Identities = 55/61 (90%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = -1
Query: 662 MAMVSGGRSTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QHQGADGFYD 486
MAMVSG RSTLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 485 S 483
+
Sbjct: 61 N 61
Score = 89 bits (220), Expect = 3e-018
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Frame = -1
Query: 446 DFDDMEDLFVADEFDVEIYHAG----GLGKNGEMVRRSRGNRSPKLIVEPAKYSEKPAKW 279
DF D + FD +Y+ G GKNGEMV++S GNRSP+ IVEPAKY+EKPAKW
Sbjct: 88 DFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGNRSPRSIVEPAKYAEKPAKW 147
Query: 278 ANQRV-AVPRNIHQPR* 231
NQRV A PRNIHQPR*
Sbjct: 148 GNQRVAAAPRNIHQPR* 164
>TAIR9_protein||AT2G41430.2 | Symbols: ERD15, LSR1, CID1 | ERD15 (EARLY
RESPONSIVE TO DEHYDRATION 15); protein binding | chr2:17269736-17270314
FORWARD
Length = 164
Score = 118 bits (295), Expect = 7e-027
Identities = 55/61 (90%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = -1
Query: 662 MAMVSGGRSTLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWIS-QHQGADGFYD 486
MAMVSG RSTLNPDAPLF+PAAVRQVEDFSPEWWQLVTTSTWY DYWIS Q QGADGFYD
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 485 S 483
+
Sbjct: 61 N 61
Score = 89 bits (220), Expect = 3e-018
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Frame = -1
Query: 446 DFDDMEDLFVADEFDVEIYHAG----GLGKNGEMVRRSRGNRSPKLIVEPAKYSEKPAKW 279
DF D + FD +Y+ G GKNGEMV++S GNRSP+ IVEPAKY+EKPAKW
Sbjct: 88 DFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGNRSPRSIVEPAKYAEKPAKW 147
Query: 278 ANQRV-AVPRNIHQPR* 231
NQRV A PRNIHQPR*
Sbjct: 148 GNQRVAAAPRNIHQPR* 164
>TAIR9_protein||AT4G14270.1 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 144
Score = 76 bits (185), Expect = 4e-014
Identities = 56/146 (38%), Positives = 75/146 (51%), Gaps = 23/146 (15%)
Frame = -1
Query: 638 STLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWISQHQ-----GADGFYDSEVD 474
STLNP+AP+F P R+VEDFSP+WW LVTTS W+ D+W+S + G D F E +
Sbjct: 10 STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEEE 69
Query: 473 VADLLPESFDFDDMEDLFVADEFDVEIYHAGGLG---KNGEMVRRSR-GNRSPKLIVEPA 306
+++ S D M D E DV Y L E + RS+ + SP
Sbjct: 70 FEEMIASS-DGGSMAD--TVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSP------- 119
Query: 305 KYSEKPAKWANQRVAVPRN--IHQPR 234
KY++K K+ N RN I+QPR
Sbjct: 120 KYNQK--KYMNPNFNCRRNHHIYQPR 143
>TAIR9_protein||AT4G14270.2 | Symbols: | Protein containing PAM2 motif which
mediates interaction with the PABC domain of polyadenyl binding
proteins. | chr4:8218517-8219037 FORWARD
Length = 142
Score = 73 bits (177), Expect = 3e-013
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = -1
Query: 638 STLNPDAPLFVPAAVRQVEDFSPEWWQLVTTSTWYHDYWISQHQ-----GADGFYDSEVD 474
STLNP+AP+F P R+VEDFSP+WW LVTTS W+ D+W+S + G D F E +
Sbjct: 10 STLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDFSVMEEE 69
Query: 473 VADLLPES 450
+++ S
Sbjct: 70 FEEMIASS 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,079,037,155
Number of Sequences: 33410
Number of Extensions: 11079037155
Number of Successful Extensions: 364795982
Number of sequences better than 0.0: 0
|
