BLASTX 7.6.2

Query= UN21259 /QuerySize=674
        (673 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G30220.1 | Symbols: RUXF | RUXF (SMALL NUCLEAR...    179   2e-045
TAIR9_protein||AT2G14285.1 | Symbols:  | FUNCTIONS IN: molecular...    124   8e-029
TAIR9_protein||AT2G43810.1 | Symbols:  | small nuclear ribonucle...     73   1e-013
TAIR9_protein||AT2G43810.2 | Symbols:  | small nuclear ribonucle...     73   1e-013
TAIR9_protein||AT3G59810.1 | Symbols:  | small nuclear ribonucle...     72   3e-013

>TAIR9_protein||AT4G30220.1 | Symbols: RUXF | RUXF (SMALL NUCLEAR
        RIBONUCLEOPROTEIN F) | chr4:14803100-14804259 REVERSE

          Length = 89

 Score =  179 bits (453), Expect = 2e-045
 Identities = 86/89 (96%), Positives = 87/89 (97%)
 Frame = +3

Query: 129 MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL 308
           MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL
Sbjct:   1 MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL 60

Query: 309 GEILIRCNNVLYVRGVPEDEELADAEQD* 395
           GEILIRCNNVLYVRGVPEDEEL DA+QD*
Sbjct:  61 GEILIRCNNVLYVRGVPEDEELEDADQD* 89

>TAIR9_protein||AT2G14285.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; CONTAINS InterPro DOMAIN/s: Small nuclear
        ribonucleoprotein SmF (InterPro:IPR016487), Like-Sm ribonucleoprotein,
        core (InterPro:IPR001163), Like-Sm ribonucleoprotein, eukaryotic and
        archaea-type, core (InterPro:IPR006649), Like-Sm
        ribonucleoprotein-related, core (InterPro:IPR010920); BEST Arabidopsis
        thaliana protein match is: RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)
        (TAIR:AT4G30220.1); Has 585 Blast hits to 585 proteins in 157 species:
        Archae - 67; Bacteria - 0; Metazoa - 219; Fungi - 139; Plants - 63;
        Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). |
        chr2:6052612-6053500 REVERSE

          Length = 62

 Score =  124 bits (309), Expect = 8e-029
 Identities = 59/62 (95%), Positives = 60/62 (96%)
 Frame = +3

Query: 210 MEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRCNNVLYVRGVPEDEELADAEQ 389
           MEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRCNNVLYVRGVPEDEEL DA+Q
Sbjct:   1 MEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRCNNVLYVRGVPEDEELEDADQ 60

Query: 390 D* 395
           D*
Sbjct:  61 D* 62

>TAIR9_protein||AT2G43810.1 | Symbols:  | small nuclear ribonucleoprotein F,
        putative / U6 snRNA-associated Sm-like protein, putative / Sm protein
        F, putative | chr2:18149725-18150879 FORWARD

          Length = 92

 Score =  73 bits (178), Expect = 1e-013
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +3

Query: 150 PKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRC 329
           P  FL ++ GK V+VKL  G++Y+G L  +D YMN+ +  TEEY++GQL    G+  +R 
Sbjct:  15 PADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNTYGDAFVRG 74

Query: 330 NNVLYV 347
           NNVLY+
Sbjct:  75 NNVLYI 80

>TAIR9_protein||AT2G43810.2 | Symbols:  | small nuclear ribonucleoprotein F,
        putative / U6 snRNA-associated Sm-like protein, putative / Sm protein
        F, putative | chr2:18149725-18150879 FORWARD

          Length = 92

 Score =  73 bits (178), Expect = 1e-013
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +3

Query: 150 PKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRC 329
           P  FL ++ GK V+VKL  G++Y+G L  +D YMN+ +  TEEY++GQL    G+  +R 
Sbjct:  15 PADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNTYGDAFVRG 74

Query: 330 NNVLYV 347
           NNVLY+
Sbjct:  75 NNVLYI 80

>TAIR9_protein||AT3G59810.1 | Symbols:  | small nuclear ribonucleoprotein F,
        putative / U6 snRNA-associated Sm-like protein, putative / Sm protein
        F, putative | chr3:22096841-22097666 FORWARD

          Length = 92

 Score =  72 bits (175), Expect = 3e-013
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +3

Query: 150 PKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRC 329
           P  FL ++ G+ V+VKL  G++Y+G L  +D YMN+ +  TEEY++GQL    G+  IR 
Sbjct:  15 PADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 330 NNVLYVRGV 356
           NNVLY+  V
Sbjct:  75 NNVLYISTV 83

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,079,037,155
Number of Sequences: 33410
Number of Extensions: 11079037155
Number of Successful Extensions: 364795982
Number of sequences better than 0.0: 0