BLASTX 7.6.2
Query= UN21299 /QuerySize=693
(692 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 255 3e-067
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 136 1e-031
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 135 4e-031
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 134 5e-031
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 131 4e-030
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 80 1e-014
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 75 5e-013
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 75 5e-013
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 75 5e-013
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 72 3e-012
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 72 3e-012
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 71 7e-012
>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia
oleracea GN=PSRP2 PE=1 SV=1
Length = 260
Score = 255 bits (649), Expect = 3e-067
Identities = 126/180 (70%), Positives = 151/180 (83%), Gaps = 6/180 (3%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GNIPR + N++L +VEEHGA+E +VMYDKYSGRSRRFGF TMK+VEDANAVIEKLN
Sbjct: 87 YVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLN 146
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
T I GR++KVNITEKP+E D++ Q+ED+ FV+SPYKVY+GNLAK+VT E+L
Sbjct: 147 DTEIGGRKIKVNITEKPLE------GMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELL 200
Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
+ FSEKGKVL AKV R PGTSKS GFGFV+FSS+E+V+AAI ALNNS+LEGQKIRVNKA
Sbjct: 201 KDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 136 bits (342), Expect = 1e-031
Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 5/180 (2%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+P + + L +L E G VE V+V+YDK +GRSR FGF TM S E+ A ++ N
Sbjct: 90 FVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFN 149
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
G ++GR ++VN P + +SS S DS +VYVGNLA V ++ L
Sbjct: 150 GYELDGRALRVNSGPPPEKRENSSFRGG-----SRGGGSFDSSNRVYVGNLAWGVDQDAL 204
Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
E+LFSE+GKV+ AKV + +S GFGFVT+SS E+V+ AI +L+ L G+ IRV+ A
Sbjct: 205 ETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPA 264
Score = 66 bits (159), Expect = 2e-010
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+ V + L L E G V +V+YD+ SGRSR FGF T S E+ N IE L+
Sbjct: 191 YVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLD 250
Query: 183 GTTIEGREVKVNITE 227
G + GR ++V+ E
Sbjct: 251 GVDLNGRAIRVSPAE 265
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 135 bits (338), Expect = 4e-031
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 7/187 (3%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+P V + QL +L E G VE V+V+YDK +GRSR FGF TM SV + A ++ N
Sbjct: 94 FVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFN 153
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAF-------VDSPYKVYVGNLAK 341
G ++GR ++VN P + S S S + + S +VYVGNL+
Sbjct: 154 GYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSW 213
Query: 342 SVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQ 521
V LESLFSE+GKV+ A+V + +S GFGFVT+ S ++V AI +L+ + L+G+
Sbjct: 214 GVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGR 273
Query: 522 KIRVNKA 542
+IRV++A
Sbjct: 274 QIRVSEA 280
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 134 bits (337), Expect = 5e-031
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 1/181 (0%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+ + + L +L E G VE V+V+YDK +GRSR FGF TM S E+ A ++ N
Sbjct: 90 FVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFN 149
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLL-QSEDAAFVDSPYKVYVGNLAKSVTKEM 359
G ++GR ++VN P + +SS + S S DS +VYVGNLA V ++
Sbjct: 150 GYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDA 209
Query: 360 LESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNK 539
LE+LFSE+GKV+ AKV + +S GFGFVT+SS E+V+ AI +L+ L G+ IRV+
Sbjct: 210 LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSP 269
Query: 540 A 542
A
Sbjct: 270 A 270
Score = 66 bits (159), Expect = 2e-010
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+ V + L L E G V +V+YD+ SGRSR FGF T S E+ N IE L+
Sbjct: 197 YVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLD 256
Query: 183 GTTIEGREVKVNITE 227
G + GR ++V+ E
Sbjct: 257 GVDLNGRAIRVSPAE 271
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 324
Score = 131 bits (329), Expect = 4e-030
Identities = 70/180 (38%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+P ++T+ QL+++ E G V V+++YD+ + RSR F F TM SVE+A I +
Sbjct: 117 YVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFD 176
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
G+ + GR VKVN E P + ++S FVDSP+K+YV NL+ ++T + L
Sbjct: 177 GSQVGGRTVKVNFPEVP---RGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGL 233
Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
F+++ +SAKV + +S GFGF+TFSS E +++A+ +N LEG+ +R+N A
Sbjct: 234 RDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 80 bits (196), Expect = 1e-014
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+P V N +L +L EHG V + +V+YD+ +GRSR FGF TM V++ N I L+
Sbjct: 247 YVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALD 306
Query: 183 GTTIEGREVKVNITEK 230
G +EGR ++VN+ E+
Sbjct: 307 GQNLEGRAIRVNVAEE 322
Score = 70 bits (171), Expect = 9e-012
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = +3
Query: 312 YKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAIL 491
++VYVGNL V LE LFSE GKV+ A+V T +S GFGFVT S ++++ AI
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303
Query: 492 ALNNSLLEGQKIRVNKA 542
AL+ LEG+ IRVN A
Sbjct: 304 ALDGQNLEGRAIRVNVA 320
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 75 bits (182), Expect = 5e-013
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +3
Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
+VYVGNL V LE LFSE GKV+SA+V T +S GFGFVT SS+ +V+ AI A
Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209
Query: 495 LNNSLLEGQKIRVNKA 542
L+ L+G+ +RVN A
Sbjct: 210 LDGQTLDGRAVRVNVA 225
Score = 74 bits (179), Expect = 1e-012
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+P V +L +L EHG V +V+ D+ +GRSR FGF TM S + N I L+
Sbjct: 152 YVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALD 211
Query: 183 GTTIEGREVKVNITEK 230
G T++GR V+VN+ E+
Sbjct: 212 GQTLDGRAVRVNVAEE 227
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 75 bits (182), Expect = 5e-013
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+P +V + L L E G VE V+V+YDK SGRSR FGF TM + E+ A ++ N
Sbjct: 91 FVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFN 150
Query: 183 GTTIEGREVKVNITEKPIELSSSS 254
G I+GR ++VN P + +SS
Sbjct: 151 GYEIDGRAIRVNAGPAPAKRENSS 174
Score = 71 bits (172), Expect = 7e-012
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +3
Query: 300 VDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVD 479
VDS +VYVGNL+ V L+ LFSE+G V+ AKV + +S GFGFVT+SS ++V+
Sbjct: 204 VDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVN 263
Query: 480 AAILALNNSLLEGQKIRVNKA 542
AI +LN L+G+ IRV+ A
Sbjct: 264 DAIDSLNGIDLDGRSIRVSAA 284
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 75 bits (182), Expect = 5e-013
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+P +V + L L E G VE V+V+YDK +GRSR FGF TM + E+ A ++ N
Sbjct: 90 FVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFN 149
Query: 183 GTTIEGREVKVNITEKPIELSSSS 254
G I+GR ++VN P + +SS
Sbjct: 150 GYEIDGRAIRVNAGPAPAKRENSS 173
Score = 72 bits (174), Expect = 4e-012
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +3
Query: 300 VDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVD 479
VDS +VYVGNL+ V L+ LFSE+G V+ AKV + +S GFGFVT+SS ++V+
Sbjct: 203 VDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVN 262
Query: 480 AAILALNNSLLEGQKIRVNKA 542
AI +LN L+G+ IRV+ A
Sbjct: 263 DAIDSLNGVDLDGRSIRVSAA 283
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 72 bits (175), Expect = 3e-012
Identities = 32/76 (42%), Positives = 50/76 (65%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GNIP + + +L ++ EHG V +V++D+ SGRSR FGF TM S + + I L+
Sbjct: 194 YVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLD 253
Query: 183 GTTIEGREVKVNITEK 230
G T++GR ++VN E+
Sbjct: 254 GQTLDGRTIRVNAAEE 269
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 72 bits (175), Expect = 3e-012
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GNIP + + +L +L EHG V +V+YD+ +GRSR FGF TM S + + I L+
Sbjct: 233 YVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLD 292
Query: 183 GTTIEGREVKVNITE 227
G +++GR ++VN+ E
Sbjct: 293 GQSLDGRTIRVNVAE 307
Score = 70 bits (170), Expect = 1e-011
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3
Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
+ Y++YVGN+ + LE LFSE GKV+SA+V T +S GFGFVT +S+ ++
Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSD 286
Query: 483 AILALNNSLLEGQKIRVNKA 542
AI L+ L+G+ IRVN A
Sbjct: 287 AIANLDGQSLDGRTIRVNVA 306
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 71 bits (172), Expect = 7e-012
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++ N
Sbjct: 102 FVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFN 161
Query: 183 GTTIEGREVKVNITEKPIELSSSSS 257
G EGR ++VN P + S S
Sbjct: 162 GYEFEGRPLRVNAGPPPPKREESFS 186
Score = 70 bits (170), Expect = 1e-011
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +3
Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
++YVGNL+ V LE+LF+E+GKV+ A+V + +S GFGFVT SS ++V AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 495 LNNSLLEGQKIRVNKA 542
LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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