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TAIR blast output of UN21299


BLASTX 7.6.2

Query= UN21299 /QuerySize=693
        (692 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G52150.1 | Symbols:  | RNA recognition motif (...    315   2e-086
TAIR9_protein||AT3G52150.2 | Symbols:  | RNA recognition motif (...    315   2e-086
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b...    140   9e-034
TAIR9_protein||AT2G37220.1 | Symbols:  | 29 kDa ribonucleoprotei...    135   4e-032
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB...     80   1e-015
TAIR9_protein||AT5G50250.1 | Symbols:  | 31 kDa ribonucleoprotei...     72   2e-013
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /...     71   6e-013
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /...     71   6e-013
TAIR9_protein||AT1G60000.1 | Symbols:  | 29 kDa ribonucleoprotei...     64   8e-011
TAIR9_protein||AT4G13860.1 | Symbols:  | glycine-rich RNA-bindin...     63   2e-010
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine...     63   2e-010
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP...     59   2e-009
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,...     59   2e-009

>TAIR9_protein||AT3G52150.1 | Symbols:  | RNA recognition motif (RRM)-containing
        protein | chr3:19342074-19343090 FORWARD

          Length = 254

 Score =  315 bits (806), Expect = 2e-086
 Identities = 161/181 (88%), Positives = 174/181 (96%), Gaps = 5/181 (2%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           YIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+EKLN
Sbjct:  79 YIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLN 138

Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
           G T+EGRE+KVNITEKPI     +SSPDLS+LQSED+AFVDSPYKVYVGNLAK+VTKEML
Sbjct: 139 GNTVEGREIKVNITEKPI-----ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEML 193

Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
           E+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDV+AAI+ALNNSLLEGQKIRVNKA
Sbjct: 194 ENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253

Query: 543 * 545
           *
Sbjct: 254 * 254

>TAIR9_protein||AT3G52150.2 | Symbols:  | RNA recognition motif (RRM)-containing
        protein | chr3:19342074-19343090 FORWARD

          Length = 254

 Score =  315 bits (806), Expect = 2e-086
 Identities = 161/181 (88%), Positives = 174/181 (96%), Gaps = 5/181 (2%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           YIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+EKLN
Sbjct:  79 YIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLN 138

Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
           G T+EGRE+KVNITEKPI     +SSPDLS+LQSED+AFVDSPYKVYVGNLAK+VTKEML
Sbjct: 139 GNTVEGREIKVNITEKPI-----ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEML 193

Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
           E+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDV+AAI+ALNNSLLEGQKIRVNKA
Sbjct: 194 ENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253

Query: 543 * 545
           *
Sbjct: 254 * 254

>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
        chr3:19421619-19422855 FORWARD

          Length = 330

 Score =  140 bits (352), Expect = 9e-034
 Identities = 71/180 (39%), Positives = 112/180 (62%), Gaps = 3/180 (1%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           Y+GN+P T+T+ +L+++  E G V  VQ++YDK + RSR FGF TM S+E+A   ++  N
Sbjct: 119 YVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFN 178

Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
            + I GR VKVN  E P       +    + ++  + ++VDSP+KVY GNL  ++T + L
Sbjct: 179 SSQIGGRTVKVNFPEVP---RGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGL 235

Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
           +  F ++  VL AKV     T +S GFGF++F S E+V +A+  +N   +EG+ +R+N A
Sbjct: 236 KDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLA 295

>TAIR9_protein||AT2G37220.1 | Symbols:  | 29 kDa ribonucleoprotein, chloroplast,
        putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
        REVERSE

          Length = 290

 Score =  135 bits (338), Expect = 4e-032
 Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 7/187 (3%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           ++GN+P  V + QL +L E  G VE V+V+YDK +GRSR FGF TM SV +  A  ++ N
Sbjct:  94 FVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFN 153

Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAF-------VDSPYKVYVGNLAK 341
           G  ++GR ++VN    P +     S    S   S  + +         S  +VYVGNL+ 
Sbjct: 154 GYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSW 213

Query: 342 SVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQ 521
            V    LESLFSE+GKV+ A+V     + +S GFGFVT+ S ++V  AI +L+ + L+G+
Sbjct: 214 GVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGR 273

Query: 522 KIRVNKA 542
           +IRV++A
Sbjct: 274 QIRVSEA 280


 Score =  60 bits (145), Expect = 9e-010
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           Y+GN+   V +  L  L  E G V + +V+YD+ SGRS+ FGF T  S ++    I+ L+
Sbjct: 207 YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLD 266

Query: 183 GTTIEGREVKVNITE 227
           G  ++GR+++V+  E
Sbjct: 267 GADLDGRQIRVSEAE 281

>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
        (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
        chr4:12766223-12767952 REVERSE

          Length = 330

 Score =  80 bits (196), Expect = 1e-015
 Identities = 35/76 (46%), Positives = 52/76 (68%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           Y+GN+P  V N +L +L  EHG V + +V+YD+ +GRSR FGF TM  V++ N  I  L+
Sbjct: 247 YVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALD 306

Query: 183 GTTIEGREVKVNITEK 230
           G  +EGR ++VN+ E+
Sbjct: 307 GQNLEGRAIRVNVAEE 322


 Score =  70 bits (171), Expect = 8e-013
 Identities = 39/77 (50%), Positives = 50/77 (64%)
 Frame = +3

Query: 312 YKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAIL 491
           ++VYVGNL   V    LE LFSE GKV+ A+V     T +S GFGFVT S  ++++ AI 
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303

Query: 492 ALNNSLLEGQKIRVNKA 542
           AL+   LEG+ IRVN A
Sbjct: 304 ALDGQNLEGRAIRVNVA 320

>TAIR9_protein||AT5G50250.1 | Symbols:  | 31 kDa ribonucleoprotein, chloroplast,
        putative / RNA-binding protein RNP-T, putative / RNA-binding protein
        1/2/3, putative / RNA-binding protein cp31, putative |
        chr5:20452677-20453965 REVERSE

          Length = 290

 Score =  72 bits (176), Expect = 2e-013
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = +3

Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
           D+ +++YVGNL   V    LE LFSE GKV+ A+V     T +S GFGFV  S++ +V+ 
Sbjct: 204 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 263

Query: 483 AILALNNSLLEGQKIRVNKA 542
           AI AL+   LEG+ I+VN A
Sbjct: 264 AIAALDGQNLEGRAIKVNVA 283


 Score =  71 bits (172), Expect = 6e-013
 Identities = 32/76 (42%), Positives = 48/76 (63%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           Y+GN+P  V + +L +L  EHG V   +V+ D+ +GRSR FGF  M +  + N  I  L+
Sbjct: 210 YVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALD 269

Query: 183 GTTIEGREVKVNITEK 230
           G  +EGR +KVN+ E+
Sbjct: 270 GQNLEGRAIKVNVAEE 285

>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
        binding | chr3:19819738-19821423 REVERSE

          Length = 343

 Score =  71 bits (172), Expect = 6e-013
 Identities = 35/85 (41%), Positives = 50/85 (58%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           ++GN+   V + QL +L E  G VE V+V+YDK +GRSR FGF TM +  +  A  ++ N
Sbjct: 102 FVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFN 161

Query: 183 GTTIEGREVKVNITEKPIELSSSSS 257
           G   EGR ++VN    P +   S S
Sbjct: 162 GYEFEGRPLRVNAGPPPPKREESFS 186


 Score =  70 bits (170), Expect = 1e-012
 Identities = 36/76 (47%), Positives = 55/76 (72%)
 Frame = +3

Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
           ++YVGNL+  V    LE+LF+E+GKV+ A+V     + +S GFGFVT SS ++V  AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 495 LNNSLLEGQKIRVNKA 542
           LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333


 Score =  64 bits (154), Expect = 8e-011
 Identities = 29/75 (38%), Positives = 46/75 (61%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           Y+GN+   V +  L  L  E G V + +V+YD+ SGRS+ FGF T+ S ++    I  LN
Sbjct: 260 YVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLN 319

Query: 183 GTTIEGREVKVNITE 227
           G  ++GR+++V+  E
Sbjct: 320 GADLDGRQIRVSEAE 334

>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
        binding | chr3:19819738-19821423 REVERSE

          Length = 343

 Score =  71 bits (172), Expect = 6e-013
 Identities = 35/85 (41%), Positives = 50/85 (58%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           ++GN+   V + QL +L E  G VE V+V+YDK +GRSR FGF TM +  +  A  ++ N
Sbjct: 102 FVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFN 161

Query: 183 GTTIEGREVKVNITEKPIELSSSSS 257
           G   EGR ++VN    P +   S S
Sbjct: 162 GYEFEGRPLRVNAGPPPPKREESFS 186


 Score =  70 bits (170), Expect = 1e-012
 Identities = 36/76 (47%), Positives = 55/76 (72%)
 Frame = +3

Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
           ++YVGNL+  V    LE+LF+E+GKV+ A+V     + +S GFGFVT SS ++V  AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 495 LNNSLLEGQKIRVNKA 542
           LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333


 Score =  64 bits (154), Expect = 8e-011
 Identities = 29/75 (38%), Positives = 46/75 (61%)
 Frame = +3

Query:   3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
           Y+GN+   V +  L  L  E G V + +V+YD+ SGRS+ FGF T+ S ++    I  LN
Sbjct: 260 YVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLN 319

Query: 183 GTTIEGREVKVNITE 227
           G  ++GR+++V+  E
Sbjct: 320 GADLDGRQIRVSEAE 334

>TAIR9_protein||AT1G60000.1 | Symbols:  | 29 kDa ribonucleoprotein, chloroplast,
        putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
        REVERSE

          Length = 259

 Score =  64 bits (154), Expect = 8e-011
 Identities = 33/87 (37%), Positives = 56/87 (64%)
 Frame = +3

Query: 282 SEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFS 461
           +++  + ++ +K++VGNL+ +VT E L   F E G V+ A+V     T +S G+GFV +S
Sbjct: 167 NKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYS 226

Query: 462 SDEDVDAAILALNNSLLEGQKIRVNKA 542
           S  +++ A+ +L+   LEG+ IRVN A
Sbjct: 227 SKAEMETALESLDGFELEGRAIRVNLA 253

>TAIR9_protein||AT4G13860.1 | Symbols:  | glycine-rich RNA-binding protein,
        putative | chr4:8022601-8023162 FORWARD

          Length = 88

 Score =  63 bits (151), Expect = 2e-010
 Identities = 31/73 (42%), Positives = 46/73 (63%)
 Frame = +3

Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
           +VYVGNL+ + T +ML   FS  G V+ A V R   T +S GFGFVT+SS  + +AA+  
Sbjct:   4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63

Query: 495 LNNSLLEGQKIRV 533
           ++   L G+++ V
Sbjct:  64 MDGKELNGRRVSV 76

>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
        RNA-binding protein 3); ATP binding / RNA binding |
        chr5:24560870-24562152 FORWARD

          Length = 310

 Score =  63 bits (151), Expect = 2e-010
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
 Frame = +3

Query: 222 TEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSA 401
           T K +    S SSP L       A    S  K+++G +A S+ ++ L   F++ G+V+  
Sbjct:  15 TNKQLNAQVSLSSPSLF-----QAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDT 69

Query: 402 KVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA*CVREGESFG 572
           +V     T +S GFGFVTF+S E   +AI AL+   L G+ ++VN A     G  FG
Sbjct:  70 RVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRTSGGGFG 126

>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
        CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
        binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE

          Length = 177

 Score =  59 bits (142), Expect = 2e-009
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +3

Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
           D  Y+ +VG LA +     LE+ F++ G V+ +K+     T +S GFGFVTF  ++ +  
Sbjct:   5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64

Query: 483 AILALNNSLLEGQKIRVNKA 542
           AI  +N   L+G+ I VN+A
Sbjct:  65 AIEGMNGQDLDGRSITVNEA 84

>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
        RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
        single-stranded DNA binding | chr2:9265477-9266316 REVERSE

          Length = 160

 Score =  59 bits (142), Expect = 2e-009
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +3

Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
           D  Y+ +VG LA +     LE+ F++ G V+ +K+     T +S GFGFVTF  ++ +  
Sbjct:   5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64

Query: 483 AILALNNSLLEGQKIRVNKA 542
           AI  +N   L+G+ I VN+A
Sbjct:  65 AIEGMNGQDLDGRSITVNEA 84

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,079,037,155
Number of Sequences: 33410
Number of Extensions: 11079037155
Number of Successful Extensions: 364795982
Number of sequences better than 0.0: 0