BLASTX 7.6.2
Query= UN21299 /QuerySize=693
(692 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 315 2e-086
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 315 2e-086
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 140 9e-034
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 135 4e-032
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 80 1e-015
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 72 2e-013
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 71 6e-013
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 71 6e-013
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 64 8e-011
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 63 2e-010
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 63 2e-010
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 59 2e-009
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 59 2e-009
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 315 bits (806), Expect = 2e-086
Identities = 161/181 (88%), Positives = 174/181 (96%), Gaps = 5/181 (2%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
YIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+EKLN
Sbjct: 79 YIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLN 138
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
G T+EGRE+KVNITEKPI +SSPDLS+LQSED+AFVDSPYKVYVGNLAK+VTKEML
Sbjct: 139 GNTVEGREIKVNITEKPI-----ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEML 193
Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
E+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDV+AAI+ALNNSLLEGQKIRVNKA
Sbjct: 194 ENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
Query: 543 * 545
*
Sbjct: 254 * 254
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 315 bits (806), Expect = 2e-086
Identities = 161/181 (88%), Positives = 174/181 (96%), Gaps = 5/181 (2%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
YIGNIPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+EKLN
Sbjct: 79 YIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLN 138
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
G T+EGRE+KVNITEKPI +SSPDLS+LQSED+AFVDSPYKVYVGNLAK+VTKEML
Sbjct: 139 GNTVEGREIKVNITEKPI-----ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEML 193
Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
E+LFSEKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDV+AAI+ALNNSLLEGQKIRVNKA
Sbjct: 194 ENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
Query: 543 * 545
*
Sbjct: 254 * 254
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 140 bits (352), Expect = 9e-034
Identities = 71/180 (39%), Positives = 112/180 (62%), Gaps = 3/180 (1%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+P T+T+ +L+++ E G V VQ++YDK + RSR FGF TM S+E+A ++ N
Sbjct: 119 YVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFN 178
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEML 362
+ I GR VKVN E P + + ++ + ++VDSP+KVY GNL ++T + L
Sbjct: 179 SSQIGGRTVKVNFPEVP---RGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGL 235
Query: 363 ESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA 542
+ F ++ VL AKV T +S GFGF++F S E+V +A+ +N +EG+ +R+N A
Sbjct: 236 KDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLA 295
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 135 bits (338), Expect = 4e-032
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 7/187 (3%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+P V + QL +L E G VE V+V+YDK +GRSR FGF TM SV + A ++ N
Sbjct: 94 FVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFN 153
Query: 183 GTTIEGREVKVNITEKPIELSSSSSSPDLSLLQSEDAAF-------VDSPYKVYVGNLAK 341
G ++GR ++VN P + S S S + + S +VYVGNL+
Sbjct: 154 GYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSW 213
Query: 342 SVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQ 521
V LESLFSE+GKV+ A+V + +S GFGFVT+ S ++V AI +L+ + L+G+
Sbjct: 214 GVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGR 273
Query: 522 KIRVNKA 542
+IRV++A
Sbjct: 274 QIRVSEA 280
Score = 60 bits (145), Expect = 9e-010
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T S ++ I+ L+
Sbjct: 207 YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLD 266
Query: 183 GTTIEGREVKVNITE 227
G ++GR+++V+ E
Sbjct: 267 GADLDGRQIRVSEAE 281
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 80 bits (196), Expect = 1e-015
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+P V N +L +L EHG V + +V+YD+ +GRSR FGF TM V++ N I L+
Sbjct: 247 YVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALD 306
Query: 183 GTTIEGREVKVNITEK 230
G +EGR ++VN+ E+
Sbjct: 307 GQNLEGRAIRVNVAEE 322
Score = 70 bits (171), Expect = 8e-013
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = +3
Query: 312 YKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAIL 491
++VYVGNL V LE LFSE GKV+ A+V T +S GFGFVT S ++++ AI
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303
Query: 492 ALNNSLLEGQKIRVNKA 542
AL+ LEG+ IRVN A
Sbjct: 304 ALDGQNLEGRAIRVNVA 320
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 72 bits (176), Expect = 2e-013
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +3
Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
D+ +++YVGNL V LE LFSE GKV+ A+V T +S GFGFV S++ +V+
Sbjct: 204 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 263
Query: 483 AILALNNSLLEGQKIRVNKA 542
AI AL+ LEG+ I+VN A
Sbjct: 264 AIAALDGQNLEGRAIKVNVA 283
Score = 71 bits (172), Expect = 6e-013
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+P V + +L +L EHG V +V+ D+ +GRSR FGF M + + N I L+
Sbjct: 210 YVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALD 269
Query: 183 GTTIEGREVKVNITEK 230
G +EGR +KVN+ E+
Sbjct: 270 GQNLEGRAIKVNVAEE 285
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 71 bits (172), Expect = 6e-013
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++ N
Sbjct: 102 FVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFN 161
Query: 183 GTTIEGREVKVNITEKPIELSSSSS 257
G EGR ++VN P + S S
Sbjct: 162 GYEFEGRPLRVNAGPPPPKREESFS 186
Score = 70 bits (170), Expect = 1e-012
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +3
Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
++YVGNL+ V LE+LF+E+GKV+ A+V + +S GFGFVT SS ++V AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 495 LNNSLLEGQKIRVNKA 542
LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
Score = 64 bits (154), Expect = 8e-011
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++ I LN
Sbjct: 260 YVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLN 319
Query: 183 GTTIEGREVKVNITE 227
G ++GR+++V+ E
Sbjct: 320 GADLDGRQIRVSEAE 334
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 71 bits (172), Expect = 6e-013
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++ N
Sbjct: 102 FVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFN 161
Query: 183 GTTIEGREVKVNITEKPIELSSSSS 257
G EGR ++VN P + S S
Sbjct: 162 GYEFEGRPLRVNAGPPPPKREESFS 186
Score = 70 bits (170), Expect = 1e-012
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +3
Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
++YVGNL+ V LE+LF+E+GKV+ A+V + +S GFGFVT SS ++V AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 495 LNNSLLEGQKIRVNKA 542
LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
Score = 64 bits (154), Expect = 8e-011
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 3 YIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLN 182
Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++ I LN
Sbjct: 260 YVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLN 319
Query: 183 GTTIEGREVKVNITE 227
G ++GR+++V+ E
Sbjct: 320 GADLDGRQIRVSEAE 334
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 64 bits (154), Expect = 8e-011
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +3
Query: 282 SEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFS 461
+++ + ++ +K++VGNL+ +VT E L F E G V+ A+V T +S G+GFV +S
Sbjct: 167 NKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYS 226
Query: 462 SDEDVDAAILALNNSLLEGQKIRVNKA 542
S +++ A+ +L+ LEG+ IRVN A
Sbjct: 227 SKAEMETALESLDGFELEGRAIRVNLA 253
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 63 bits (151), Expect = 2e-010
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +3
Query: 315 KVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 494
+VYVGNL+ + T +ML FS G V+ A V R T +S GFGFVT+SS + +AA+
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 495 LNNSLLEGQKIRV 533
++ L G+++ V
Sbjct: 64 MDGKELNGRRVSV 76
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 63 bits (151), Expect = 2e-010
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Frame = +3
Query: 222 TEKPIELSSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSA 401
T K + S SSP L A S K+++G +A S+ ++ L F++ G+V+
Sbjct: 15 TNKQLNAQVSLSSPSLF-----QAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDT 69
Query: 402 KVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA*CVREGESFG 572
+V T +S GFGFVTF+S E +AI AL+ L G+ ++VN A G FG
Sbjct: 70 RVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRTSGGGFG 126
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 59 bits (142), Expect = 2e-009
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
D Y+ +VG LA + LE+ F++ G V+ +K+ T +S GFGFVTF ++ +
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 483 AILALNNSLLEGQKIRVNKA 542
AI +N L+G+ I VN+A
Sbjct: 65 AIEGMNGQDLDGRSITVNEA 84
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 59 bits (142), Expect = 2e-009
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 303 DSPYKVYVGNLAKSVTKEMLESLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 482
D Y+ +VG LA + LE+ F++ G V+ +K+ T +S GFGFVTF ++ +
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 483 AILALNNSLLEGQKIRVNKA 542
AI +N L+G+ I VN+A
Sbjct: 65 AIEGMNGQDLDGRSITVNEA 84
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,079,037,155
Number of Sequences: 33410
Number of Extensions: 11079037155
Number of Successful Extensions: 364795982
Number of sequences better than 0.0: 0
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