BLASTX 7.6.2
Query= UN21312 /QuerySize=832
(831 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L... 399 1e-111
TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L... 399 1e-111
TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L... 394 6e-110
TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L... 393 7e-110
TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L... 390 6e-109
TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L... 386 2e-107
>TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 399 bits (1024), Expect = 1e-111
Identities = 196/207 (94%), Positives = 202/207 (97%)
Frame = +2
Query: 35 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 214
MVSGSGICSKRVVVDARHHMLGRLASI AKELLNGQKVVIVRCEEICLSGGLVRQKMKYM
Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 215 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGSAALARMKVFEGVPPPYDKV 394
RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRG+AALAR+KV+EGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120
Query: 395 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 574
KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKER+ VVYERKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180
Query: 575 KLRAKAEKVAEEKLGAQLEILAPVKY* 655
KLR KAEKVAEEKLGAQL+ILAPVKY*
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 399 bits (1024), Expect = 1e-111
Identities = 196/207 (94%), Positives = 202/207 (97%)
Frame = +2
Query: 35 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 214
MVSGSGICSKRVVVDARHHMLGRLASI AKELLNGQKVVIVRCEEICLSGGLVRQKMKYM
Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 215 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGSAALARMKVFEGVPPPYDKV 394
RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRG+AALAR+KV+EGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120
Query: 395 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 574
KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKER+ VVYERKKQLN
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180
Query: 575 KLRAKAEKVAEEKLGAQLEILAPVKY* 655
KLR KAEKVAEEKLGAQL+ILAPVKY*
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L13A (RPL13aC) |
chr4:7655133-7656542 REVERSE
Length = 207
Score = 394 bits (1010), Expect = 6e-110
Identities = 189/207 (91%), Positives = 202/207 (97%)
Frame = +2
Query: 35 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 214
MVSGSGIC+KRVVVD RHHMLGRLAS AKELLNGQ+VV+VRCEEICLSGGLVRQKMKYM
Sbjct: 1 MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60
Query: 215 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGSAALARMKVFEGVPPPYDKV 394
RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRG+AALAR+KVFEG+PPPYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120
Query: 395 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 574
KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQV+YERKKQLN
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180
Query: 575 KLRAKAEKVAEEKLGAQLEILAPVKY* 655
KLR KAEKVAEE+LG+QL++LAPVKY*
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L13A (RPL13aB) |
chr3:9064613-9065871 FORWARD
Length = 207
Score = 393 bits (1009), Expect = 7e-110
Identities = 191/207 (92%), Positives = 200/207 (96%)
Frame = +2
Query: 35 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 214
MVSGSGICSKRVVVDARHHM GRLASI+AKELLNGQ VV+VRCEEICLSGGLVRQKMKYM
Sbjct: 1 MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60
Query: 215 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGSAALARMKVFEGVPPPYDKV 394
RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRG+AALAR+KVFEGVPPPYDKV
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120
Query: 395 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 574
KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQ +YERKKQL
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180
Query: 575 KLRAKAEKVAEEKLGAQLEILAPVKY* 655
KLRAKAEKVAEEKLG+QL++LA +KY*
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY* 207
>TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 207
Score = 390 bits (1001), Expect = 6e-109
Identities = 187/207 (90%), Positives = 201/207 (97%)
Frame = +2
Query: 35 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 214
MVSGSGIC+KRVVVDARHHMLGRLAS+VAK+LLNGQ +V+VRCEEICLSGGLVRQKMKYM
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60
Query: 215 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGSAALARMKVFEGVPPPYDKV 394
RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRG+ ALAR+KVFEGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120
Query: 395 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 574
KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q VYERKKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180
Query: 575 KLRAKAEKVAEEKLGAQLEILAPVKY* 655
KLRAKAEKVAEEKLG+QL++LAPVKY*
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 208
Score = 386 bits (989), Expect = 2e-107
Identities = 187/208 (89%), Positives = 201/208 (96%), Gaps = 1/208 (0%)
Frame = +2
Query: 35 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 214
MVSGSGIC+KRVVVDARHHMLGRLAS+VAK+LLNGQ +V+VRCEEICLSGGLVRQKMKYM
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60
Query: 215 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGSAALARMKVFEGVPPPYDKV 394
RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRG+ ALAR+KVFEGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120
Query: 395 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK-ELETKRKERSQVVYERKKQL 571
KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK ELE KRKER+Q VYERKKQL
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQELENKRKERAQAVYERKKQL 180
Query: 572 NKLRAKAEKVAEEKLGAQLEILAPVKY* 655
+KLRAKAEKVAEEKLG+QL++LAPVKY*
Sbjct: 181 SKLRAKAEKVAEEKLGSQLDVLAPVKY* 208
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,079,037,155
Number of Sequences: 33410
Number of Extensions: 11079037155
Number of Successful Extensions: 364795982
Number of sequences better than 0.0: 0
|
