BLASTX 7.6.2
Query= UN21327 /QuerySize=668
(667 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 207 7e-053
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 186 1e-046
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 179 2e-044
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 176 2e-043
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 115 3e-025
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 113 1e-024
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 112 2e-024
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 109 2e-023
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 104 7e-022
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 104 9e-022
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 90 1e-017
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 88 4e-017
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 88 5e-017
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 87 1e-016
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 207 bits (525), Expect = 7e-053
Identities = 103/114 (90%), Positives = 109/114 (95%), Gaps = 1/114 (0%)
Frame = +2
Query: 215 LNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARV 394
LNGRLLTVNKAAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVV ARV
Sbjct: 216 LNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARV 275
Query: 395 VYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 553
VYDRETGRSRGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 276 VYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 329
Score = 130 bits (326), Expect = 9e-030
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +3
Query: 3 EPPEEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEA 182
EP EEAKLFVGNLAYDV+SQALAMLFEQAG VEIAEVIYNRETDQSRGFGFVTMS+V+EA
Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204
Query: 183 ETAVEKFNRY 212
ETAVEKFNRY
Sbjct: 205 ETAVEKFNRY 214
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 186 bits (471), Expect = 1e-046
Identities = 86/111 (77%), Positives = 101/111 (90%)
Frame = +2
Query: 215 LNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARV 394
LNGRLLTVNKAAPRGSRPER PR ++P +R+YVGN+PWD+D+ RLEQVFSEHGKVV ARV
Sbjct: 163 LNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARV 222
Query: 395 VYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 547
V+DRE+GRSRGFGFVTMS+E E+++AIA LDGQ ++GR IRVN AEERPRR
Sbjct: 223 VFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273
Score = 113 bits (282), Expect = 1e-024
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +3
Query: 3 EPPEEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEA 182
EP E+AKLFVGNL YD+DS+ LA LF+QAG VEIAEVIYNRETD+SRGFGFVTMSTVEEA
Sbjct: 92 EPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 151
Query: 183 ETAVEKFNRY 212
+ AVE +++Y
Sbjct: 152 DKAVELYSQY 161
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 179 bits (452), Expect = 2e-044
Identities = 91/114 (79%), Positives = 102/114 (89%), Gaps = 2/114 (1%)
Frame = +2
Query: 215 LNGRLLTVNKAAPRGSRPERQPR-VYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*AR 391
++GR LTVNKAAPRGS PER PR +EP+ RVYVGNLPWDVD RLEQ+FSEHGKVV AR
Sbjct: 121 MDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSAR 179
Query: 392 VVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 553
VV DRETGRSRGFGFVTMS+E+E+NDAIAALDGQ ++GRA+RVNVAEERPRR F
Sbjct: 180 VVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 233
Score = 114 bits (284), Expect = 6e-025
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +3
Query: 3 EPPEEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEA 182
EPPEEAKLFVGNL YDVDS+ LA +F+ AG VEIAEVIYNRETD+SRGFGFVTMSTVEEA
Sbjct: 50 EPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 109
Query: 183 ETAVEKFNRY 212
E AVE N Y
Sbjct: 110 EKAVELLNGY 119
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 176 bits (444), Expect = 2e-043
Identities = 82/111 (73%), Positives = 99/111 (89%)
Frame = +2
Query: 215 LNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARV 394
+NGRLLTVNKAA RG RPER PR +E ++R+YVGN+PW +D+ RLEQ+FSEHGKVV ARV
Sbjct: 202 VNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARV 261
Query: 395 VYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 547
VYDRETGRSRGFGFVTM++E E++DAIA LDGQ+++GR IRVNVAE+R RR
Sbjct: 262 VYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRR 312
Score = 123 bits (307), Expect = 1e-027
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +3
Query: 3 EPPEEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEA 182
EPPE+AKLFVGNL YDVDS+ LA LFEQAG VEIAEVIYNR+TDQSRGFGFVTMSTVEEA
Sbjct: 131 EPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEA 190
Query: 183 ETAVEKFNRY 212
E AVE +NRY
Sbjct: 191 EKAVEMYNRY 200
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 115 bits (287), Expect = 3e-025
Identities = 64/126 (50%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Frame = +2
Query: 191 C*EVQPLYLNGRLLTVNKAAPRGSRPERQPR-------VYEPAFRVYVGNLPWDVDNGRL 349
C + L+GR L VN P R R ++ + RVYVGNL W VD L
Sbjct: 145 CQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDAL 204
Query: 350 EQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVA 529
E +FSE GKVV A+VVYDR++GRSRGFGFVT S+ E+N+AI +LDG ++ GRAIRV+ A
Sbjct: 205 ETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPA 264
Query: 530 EERPRR 547
E RP R
Sbjct: 265 EARPPR 270
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 113 bits (282), Expect = 1e-024
Identities = 56/94 (59%), Positives = 74/94 (78%)
Frame = +2
Query: 272 RQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSN 451
R R + + RVYVGNL W VD+ L+++FSE G VV A+VVYDR++GRSRGFGFVT S+
Sbjct: 198 RGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 257
Query: 452 ETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 553
E+NDAI +L+G +++GR+IRV+ AEERPRR F
Sbjct: 258 SKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQF 291
Score = 87 bits (215), Expect = 6e-017
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +3
Query: 12 EEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEAETA 191
E+ KLFVGNL + VDS ALA LFE+AG VE+ EVIY++ T +SRGFGFVTMST EE E A
Sbjct: 85 EDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAA 144
Query: 192 VEKFNRY 212
++FN Y
Sbjct: 145 EQQFNGY 151
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 112 bits (280), Expect = 2e-024
Identities = 56/94 (59%), Positives = 74/94 (78%)
Frame = +2
Query: 272 RQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSN 451
R R + + RVYVGNL W VD+ L+++FSE G VV A+VVYDR++GRSRGFGFVT S+
Sbjct: 199 RGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 258
Query: 452 ETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 553
E+NDAI +L+G +++GR+IRV+ AEERPRR F
Sbjct: 259 AKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292
Score = 87 bits (214), Expect = 8e-017
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +3
Query: 12 EEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEAETA 191
E+ KLFVGNL + VDS ALA LFE+AG VEI EVIY++ + +SRGFGFVTMST EE E A
Sbjct: 86 EDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAA 145
Query: 192 VEKFNRY 212
++FN Y
Sbjct: 146 EQQFNGY 152
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 109 bits (272), Expect = 2e-023
Identities = 54/87 (62%), Positives = 68/87 (78%)
Frame = +2
Query: 287 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELN 466
++ + RVYVGNL W VD LE +FSE GKVV A+VVYDR++GRSRGFGFVT S+ E+N
Sbjct: 190 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 249
Query: 467 DAIAALDGQNMEGRAIRVNVAEERPRR 547
+AI +LDG ++ GRAIRV+ AE RP R
Sbjct: 250 NAIESLDGVDLNGRAIRVSPAEARPPR 276
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 104 bits (258), Expect = 7e-022
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
RVYVGNL W VD+ LE +FSE GKVV ARV+YDR++GRS+GFGFVT + E+ +AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 482 LDGQNMEGRAIRVNVAEERPRR 547
LDG +++GR IRV+ AE RP R
Sbjct: 265 LDGADLDGRQIRVSEAEARPPR 286
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 104 bits (257), Expect = 9e-022
Identities = 49/83 (59%), Positives = 66/83 (79%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 482 LDGQNMEGRAIRVNVAEERPRRG 550
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba
PE=2 SV=1
Length = 166
Score = 90 bits (221), Expect = 1e-017
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +2
Query: 299 FRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIA 478
+R +VG L W D+ LE FS++G+V+ ++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 479 ALDGQNMEGRAIRVNVAEERPRRG 550
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana
GN=GRP7 PE=1 SV=1
Length = 176
Score = 88 bits (217), Expect = 4e-017
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +2
Query: 299 FRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIA 478
+R +VG L W D+ LE F+++G V+ ++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 479 ALDGQNMEGRAIRVNVAEERPRRG 550
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba
PE=2 SV=1
Length = 169
Score = 88 bits (216), Expect = 5e-017
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2
Query: 299 FRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIA 478
+R +VG L W D LE FS+ G++V ++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 479 ALDGQNMEGRAIRVNVAEER 538
++GQ+++GR+I VN A+ R
Sbjct: 68 GMNGQDLDGRSITVNEAQSR 87
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 87 bits (213), Expect = 1e-016
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +2
Query: 290 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELND 469
E +R +VG L W ++ LEQ FS+ G + ++++ DRETGRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRD 62
Query: 470 AIAALDGQNMEGRAIRVNVAEERPRRG 550
AI ++GQ ++GR I VN A+ R G
Sbjct: 63 AIEGMNGQELDGRNITVNEAQSRGSGG 89
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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