BLASTX 7.6.2
Query= UN21327 /QuerySize=668
(667 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 207 5e-054
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 191 5e-049
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 104 6e-023
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 104 8e-023
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 104 8e-023
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 93 1e-019
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 88 4e-018
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 88 4e-018
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 88 5e-018
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 88 5e-018
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 86 2e-017
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 83 1e-016
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 83 1e-016
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 83 1e-016
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 83 1e-016
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 207 bits (526), Expect = 5e-054
Identities = 103/115 (89%), Positives = 109/115 (94%), Gaps = 1/115 (0%)
Frame = +2
Query: 215 LNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARV 394
LNGRLLTVNKAAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVV ARV
Sbjct: 216 LNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARV 275
Query: 395 VYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF* 556
VYDRETGRSRGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+*
Sbjct: 276 VYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY* 330
Score = 130 bits (326), Expect = 8e-031
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +3
Query: 3 EPPEEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEA 182
EP EEAKLFVGNLAYDV+SQALAMLFEQAG VEIAEVIYNRETDQSRGFGFVTMS+V+EA
Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204
Query: 183 ETAVEKFNRY 212
ETAVEKFNRY
Sbjct: 205 ETAVEKFNRY 214
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 191 bits (483), Expect = 5e-049
Identities = 93/111 (83%), Positives = 103/111 (92%)
Frame = +2
Query: 215 LNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARV 394
+NGR LTVN+AAPRGSRPERQPRVY+ AFR+YVGNLPWDVD+GRLE++FSEHGKVV ARV
Sbjct: 179 VNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARV 238
Query: 395 VYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 547
V DRETGRSRGFGFV MSNE E+N AIAALDGQN+EGRAI+VNVAEER RR
Sbjct: 239 VSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
Score = 127 bits (319), Expect = 5e-030
Identities = 63/70 (90%), Positives = 66/70 (94%)
Frame = +3
Query: 3 EPPEEAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEA 182
EPPEEAKLFVGNL YDVDSQALAMLFEQAG VEI+EVIYNR+TDQSRGFGFVTMSTVEEA
Sbjct: 108 EPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEA 167
Query: 183 ETAVEKFNRY 212
E AVEKFN +
Sbjct: 168 EKAVEKFNSF 177
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 104 bits (258), Expect = 6e-023
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
RVYVGNL W VD+ LE +FSE GKVV ARV+YDR++GRS+GFGFVT + E+ +AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 482 LDGQNMEGRAIRVNVAEERPRR 547
LDG +++GR IRV+ AE RP R
Sbjct: 265 LDGADLDGRQIRVSEAEARPPR 286
Score = 84 bits (207), Expect = 5e-017
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +3
Query: 15 EAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAV 194
+ KLFVGNL ++VDS LA LFE AG VE+ EVIY++ T +SRGFGFVTMS+V E E A
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149
Query: 195 EKFNRY 212
++FN Y
Sbjct: 150 QQFNGY 155
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 104 bits (257), Expect = 8e-023
Identities = 49/83 (59%), Positives = 66/83 (79%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 482 LDGQNMEGRAIRVNVAEERPRRG 550
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
Score = 85 bits (209), Expect = 3e-017
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +3
Query: 15 EAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAV 194
+ KLFVGNL+++VDS LA LFE AG VE+ EVIY++ T +SRGFGFVTMST E E A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 195 EKFNRY 212
++FN Y
Sbjct: 158 QQFNGY 163
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 104 bits (257), Expect = 8e-023
Identities = 49/83 (59%), Positives = 66/83 (79%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 482 LDGQNMEGRAIRVNVAEERPRRG 550
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
Score = 85 bits (209), Expect = 3e-017
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +3
Query: 15 EAKLFVGNLAYDVDSQALAMLFEQAGAVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAV 194
+ KLFVGNL+++VDS LA LFE AG VE+ EVIY++ T +SRGFGFVTMST E E A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 195 EKFNRY 212
++FN Y
Sbjct: 158 QQFNGY 163
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 93 bits (229), Expect = 1e-019
Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Frame = +2
Query: 221 GRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVY 400
GR L VN A +P ++P E +++VGNL W V + L F E G VV ARVV+
Sbjct: 153 GRALKVNFADK--PKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVF 210
Query: 401 DRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAE 532
D +TGRSRG+GFV S++ E+ A+ +LDG +EGRAIRVN+A+
Sbjct: 211 DGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 88 bits (217), Expect = 4e-018
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +2
Query: 299 FRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIA 478
+R +VG L W D+ LE F+++G V+ ++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 479 ALDGQNMEGRAIRVNVAEERPRRG 550
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 88 bits (217), Expect = 4e-018
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +2
Query: 299 FRVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIA 478
+R +VG L W D+ LE F+++G V+ ++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 479 ALDGQNMEGRAIRVNVAEERPRRG 550
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 88 bits (216), Expect = 5e-018
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
+++VG L W D+ L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 482 LDGQNMEGRAIRVNVAEER---PRRGF 553
+DG+ + GR IRVN+A ER PR F
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 88 bits (216), Expect = 5e-018
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
+++VG L W D+ L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 482 LDGQNMEGRAIRVNVAEER---PRRGF 553
+DG+ + GR IRVN+A ER PR F
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 86 bits (210), Expect = 2e-017
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
++++G L W D+ L F+ G VV A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 482 LDGQNMEGRAIRVNVAEERPRRGF 553
+DG+ + GR IRVN A +RP G+
Sbjct: 96 MDGKELNGRHIRVNPANDRPSGGY 119
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 83 bits (204), Expect = 1e-016
Identities = 38/80 (47%), Positives = 53/80 (66%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
++++G L W D+ L F+ G VV A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 482 LDGQNMEGRAIRVNVAEERP 541
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 83 bits (204), Expect = 1e-016
Identities = 38/80 (47%), Positives = 53/80 (66%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
++++G L W D+ L F+ G VV A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 482 LDGQNMEGRAIRVNVAEERP 541
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 83 bits (204), Expect = 1e-016
Identities = 38/80 (47%), Positives = 53/80 (66%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
++++G L W D+ L F+ G VV A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 482 LDGQNMEGRAIRVNVAEERP 541
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 83 bits (204), Expect = 1e-016
Identities = 36/83 (43%), Positives = 58/83 (69%)
Frame = +2
Query: 302 RVYVGNLPWDVDNGRLEQVFSEHGKVV*ARVVYDRETGRSRGFGFVTMSNETELNDAIAA 481
++++G + + +D L + F+++G+VV RV+ DRETGRSRGFGFVT ++ + AI A
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 482 LDGQNMEGRAIRVNVAEERPRRG 550
LDG+++ GR ++VN A +R G
Sbjct: 101 LDGRDLHGRVVKVNYANDRTSGG 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,079,037,155
Number of Sequences: 33410
Number of Extensions: 11079037155
Number of Successful Extensions: 364795982
Number of sequences better than 0.0: 0
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