BLASTX 7.6.2
Query= UN21358 /QuerySize=1045
(1044 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53870.1 | Symbols: | 40S ribosomal protein S... 426 1e-119
TAIR9_protein||AT5G35530.1 | Symbols: | 40S ribosomal protein S... 423 1e-118
TAIR9_protein||AT2G31610.1 | Symbols: | 40S ribosomal protein S... 421 6e-118
>TAIR9_protein||AT3G53870.1 | Symbols: | 40S ribosomal protein S3 (RPS3B) |
chr3:19951547-19952782 FORWARD
Length = 250
Score = 426 bits (1095), Expect = 1e-119
Identities = 217/230 (94%), Positives = 223/230 (96%)
Frame = +2
Query: 83 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 262
M TQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 263 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVTNRGLCAIAQAESLRYKLLGGLAVRRACY 442
EKGRRIRELTSLVQKRF+FP DSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 443 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKDYIDSAVRHVLLRQG 622
GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTK+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 623 VLGIKVKVMLDWDPKGINGPKTPLPDVVIIHAPKEDDVNSAPAQVTAPAA 772
VLGIKVKVMLDWDPKGI+GPKTPLPDVVIIH+PKE++ APAQV APAA
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAA 230
>TAIR9_protein||AT5G35530.1 | Symbols: | 40S ribosomal protein S3 (RPS3C) |
chr5:13710355-13712192 REVERSE
Length = 249
Score = 423 bits (1086), Expect = 1e-118
Identities = 215/230 (93%), Positives = 220/230 (95%)
Frame = +2
Query: 83 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 262
MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 263 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVTNRGLCAIAQAESLRYKLLGGLAVRRACY 442
EKGRRIRELTSLVQKRF+FPQDSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 443 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKDYIDSAVRHVLLRQG 622
GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTK+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 623 VLGIKVKVMLDWDPKGINGPKTPLPDVVIIHAPKEDDVNSAPAQVTAPAA 772
VLG+KVK+MLDWDPKG GP TPLPDVVIIH PKEDDV APAQV AA
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAA 230
>TAIR9_protein||AT2G31610.1 | Symbols: | 40S ribosomal protein S3 (RPS3A) |
chr2:13450384-13451669 FORWARD
Length = 251
Score = 421 bits (1080), Expect = 6e-118
Identities = 214/228 (93%), Positives = 220/228 (96%)
Frame = +2
Query: 83 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 262
MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 263 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVTNRGLCAIAQAESLRYKLLGGLAVRRACY 442
EKGRRIRELTSLVQKRF+FP DSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 443 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKDYIDSAVRHVLLRQG 622
GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTK+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 623 VLGIKVKVMLDWDPKGINGPKTPLPDVVIIHAPKEDDVNSAPAQVTAP 766
VLGIKVK+MLDWDP G +GPKTPLPDVVIIHAPK+D V SAPAQ AP
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAP 228
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,173,142,472
Number of Sequences: 33410
Number of Extensions: 11173142472
Number of Successful Extensions: 370179375
Number of sequences better than 0.0: 0
|
