BLASTX 7.6.2
Query= UN21361 /QuerySize=1347
(1346 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT... 623 3e-176
gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing facto... 618 9e-175
gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis ... 614 1e-173
gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis... 614 1e-173
gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing f... 547 3e-153
gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana] 545 8e-153
gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing facto... 532 7e-149
gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing facto... 486 4e-135
gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT... 485 1e-134
gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing facto... 483 3e-134
gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana] 482 6e-134
gi|238481546|ref|NP_001154774.1| arginine/serine-rich-splicing f... 421 2e-115
gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana] 418 1e-114
gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing f... 416 5e-114
gi|224120150|ref|XP_002318257.1| predicted protein [Populus tric... 395 1e-107
gi|224136870|ref|XP_002322436.1| predicted protein [Populus tric... 389 5e-106
gi|255636874|gb|ACU18770.1| unknown [Glycine max] 384 2e-104
gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis r... 367 3e-099
gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 ... 367 4e-099
gi|225455461|ref|XP_002279907.1| PREDICTED: similar to splicing ... 367 4e-099
>gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278
[Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 623 bits (1605), Expect = 3e-176
Identities = 313/352 (88%), Positives = 332/352 (94%), Gaps = 8/352 (2%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDRIEF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRDLERHF 471
GRKGRRLRVEWTK ER GDRRS GGGSRRSSS +RPSKTLFVINFDADNTRTRDLERHF
Sbjct: 61 GRKGRRLRVEWTKSEREGDRRS--GGGSRRSSSGMRPSKTLFVINFDADNTRTRDLERHF 118
Query: 472 EPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHS 651
EPYGKI+NVRIRRNFAF+QYE QEDATRAL+ATNNSKLMDKVISVEYA+KDDDARGNGHS
Sbjct: 119 EPYGKILNVRIRRNFAFIQYEAQEDATRALDATNNSKLMDKVISVEYAVKDDDARGNGHS 178
Query: 652 PERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 831
PERRRDRSPERRR SPSPYKRERGSPDYGRG SPVAAY+++RTSPDYGRRRSPSPYK++R
Sbjct: 179 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKDRTSPDYGRRRSPSPYKKSR 238
Query: 832 RSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKESLKNGDGEVD 1011
SPEYGRD RGN+SPRRRER ASP+YSRSP+NKRER+SP+ SPFKKES +NG GEVD
Sbjct: 239 CGSPEYGRD--RRGNDSPRRRERVASPKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVD 296
Query: 1012 SP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPAE 1161
SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRSRSPPA+
Sbjct: 297 SPIVRRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSRSPPAD 347
>gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 350
Score = 618 bits (1592), Expect = 9e-175
Identities = 311/354 (87%), Positives = 332/354 (93%), Gaps = 8/354 (2%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFE 474
GRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTRDLE+HFE
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFE 119
Query: 475 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSP 654
PYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVISVEYA+KDDDARGNGHSP
Sbjct: 120 PYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSP 179
Query: 655 ERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRR 834
ERRRDRSPERRR SPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR
Sbjct: 180 ERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR 239
Query: 835 SSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVD 1011
SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+
Sbjct: 240 GSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVE 297
Query: 1012 SP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1164
SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E
Sbjct: 298 SPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE 350
>gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 350
Score = 614 bits (1583), Expect = 1e-173
Identities = 309/354 (87%), Positives = 331/354 (93%), Gaps = 8/354 (2%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFE 474
GR+GR LRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTRDLE+HFE
Sbjct: 61 GRRGRTLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFE 119
Query: 475 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSP 654
PYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVISVEYA+KDDDARGNGHSP
Sbjct: 120 PYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSP 179
Query: 655 ERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRR 834
ERRRDRSPERRR SP+PYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR
Sbjct: 180 ERRRDRSPERRRRSPTPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR 239
Query: 835 SSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVD 1011
SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+
Sbjct: 240 GSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVE 297
Query: 1012 SP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1164
SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E
Sbjct: 298 SPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE 350
>gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 349
Score = 614 bits (1583), Expect = 1e-173
Identities = 309/353 (87%), Positives = 330/353 (93%), Gaps = 8/353 (2%)
Frame = +1
Query: 118 KPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFG 297
KPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EFG
Sbjct: 1 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFG 60
Query: 298 RKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFEP 477
RKGRRLRVEWTKGERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTRDLE+HFEP
Sbjct: 61 RKGRRLRVEWTKGERGGDKRS-GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP 119
Query: 478 YGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE 657
YGKIVNVRIRRNFAF+QYE QEDATRAL+A+NN KLMDKVISVEYA+KDDDARGNGHSPE
Sbjct: 120 YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNRKLMDKVISVEYAVKDDDARGNGHSPE 179
Query: 658 RRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRS 837
RRRDRSPERRR SPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR
Sbjct: 180 RRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRG 239
Query: 838 SPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDS 1014
SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+S
Sbjct: 240 SPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVES 297
Query: 1015 P--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1164
P RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQK RS RSPPA+E
Sbjct: 298 PIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKRRSPRSPPADE 349
>gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 317
Score = 547 bits (1407), Expect = 3e-153
Identities = 277/319 (86%), Positives = 297/319 (93%), Gaps = 8/319 (2%)
Frame = +1
Query: 220 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLR 399
GFAFVYMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+R
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMR 61
Query: 400 PSKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNS 579
PSKTLFVINFDADNTRTRDLE+HFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNS
Sbjct: 62 PSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNS 121
Query: 580 KLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVA 759
KLMDKVISVEYA+KDDDARGNGHSPERRRDRSPERRR SPSPYKRERGSPDYGRG SPVA
Sbjct: 122 KLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVA 181
Query: 760 AYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDN 936
AY++ERTSPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+N
Sbjct: 182 AYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNN 239
Query: 937 KRERVSPDRSPFKKESLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDG 1110
KRER+SP+ SPFKKES +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDG
Sbjct: 240 KRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDG 299
Query: 1111 ADSPPMQKSRS-RSPPAEE 1164
A+S PMQKSRS RSPPA+E
Sbjct: 300 AES-PMQKSRSPRSPPADE 317
>gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]
Length = 317
Score = 545 bits (1403), Expect = 8e-153
Identities = 276/319 (86%), Positives = 297/319 (93%), Gaps = 8/319 (2%)
Frame = +1
Query: 220 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLR 399
GFAFVYMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+R
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMR 61
Query: 400 PSKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNS 579
PSKTLFVINFDADNTRTRDLE+HFEPYGKIVNVRIRRNFAF+QY+ QEDATRAL+A+NNS
Sbjct: 62 PSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYKAQEDATRALDASNNS 121
Query: 580 KLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVA 759
KLMDKVISVEYA+KDDDARGNGHSPERRRDRSPERRR SPSPYKRERGSPDYGRG SPVA
Sbjct: 122 KLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVA 181
Query: 760 AYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDN 936
AY++ERTSPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+N
Sbjct: 182 AYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNN 239
Query: 937 KRERVSPDRSPFKKESLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDG 1110
KRER+SP+ SPFKKES +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDG
Sbjct: 240 KRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDG 299
Query: 1111 ADSPPMQKSRS-RSPPAEE 1164
A+S PMQKSRS RSPPA+E
Sbjct: 300 AES-PMQKSRSPRSPPADE 317
>gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 309
Score = 532 bits (1369), Expect = 7e-149
Identities = 270/312 (86%), Positives = 290/312 (92%), Gaps = 8/312 (2%)
Frame = +1
Query: 241 EDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFV 420
EDERDAEDAIRALDR EFGRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFV
Sbjct: 2 EDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFV 60
Query: 421 INFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVI 600
INFDADNTRTRDLE+HFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVI
Sbjct: 61 INFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVI 120
Query: 601 SVEYAMKDDDARGNGHSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERT 780
SVEYA+KDDDARGNGHSPERRRDRSPERRR SPSPYKRERGSPDYGRG SPVAAY++ERT
Sbjct: 121 SVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERT 180
Query: 781 SPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSP 957
SPDYGRRRSPSPYK++RR SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP
Sbjct: 181 SPDYGRRRSPSPYKKSRRGSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSP 238
Query: 958 DRSPFKKESLKNGDGEVDSP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQ 1131
+ SPFKKES +NG GEV+SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQ
Sbjct: 239 NHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQ 297
Query: 1132 KSRS-RSPPAEE 1164
KSRS RSPPA+E
Sbjct: 298 KSRSPRSPPADE 309
>gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 357
Score = 486 bits (1250), Expect = 4e-135
Identities = 264/360 (73%), Positives = 287/360 (79%), Gaps = 17/360 (4%)
Frame = +1
Query: 121 PVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGR 300
PVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+GR
Sbjct: 3 PVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGR 62
Query: 301 KGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRDLERHFEP 477
GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVINFDA NTRTRDLERHFEP
Sbjct: 63 TGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEP 119
Query: 478 YGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE 657
YGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVISVEYA+KDDD+RGNG+SPE
Sbjct: 120 YGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPE 179
Query: 658 RRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKRTRR 834
RRRDRSP+RRR SPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR R
Sbjct: 180 RRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKRA-R 237
Query: 835 SSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKKESL 987
SP+Y RD R R N + R R SRSP + +RE SP ++ES
Sbjct: 238 LSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRRESR 297
Query: 988 KNGDGEVDSPR-RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPAEE 1164
E R R RS+SSPENGQVESPG I ++ GYDGADSP + S SRSPPAEE
Sbjct: 298 SPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRESSPSRSPPAEE 357
>gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT_495275
[Arabidopsis lyrata subsp. lyrata]
Length = 357
Score = 485 bits (1246), Expect = 1e-134
Identities = 261/360 (72%), Positives = 287/360 (79%), Gaps = 17/360 (4%)
Frame = +1
Query: 121 PVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGR 300
PVFCGNFEYDARE DLERLF++YG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+GR
Sbjct: 3 PVFCGNFEYDARESDLERLFKRYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGR 62
Query: 301 KGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRDLERHFEP 477
GRRLRVEWTK +RGG +G GGSRRSSS +RPSKTLFVINFDA NTRTRDLERHFEP
Sbjct: 63 TGRRLRVEWTKNDRGG---AGRSGGSRRSSSGMRPSKTLFVINFDAQNTRTRDLERHFEP 119
Query: 478 YGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE 657
YGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVISVEYA+KDDD+RGNG+SPE
Sbjct: 120 YGKIVNVRIRRNFAFIQYESQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPE 179
Query: 658 RRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKRTRR 834
RRRDRSP+RRR SPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR R
Sbjct: 180 RRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKRA-R 237
Query: 835 SSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKKESL 987
SP+Y RD R R N + R R SRSP + +RE SP ++ES
Sbjct: 238 LSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRRESR 297
Query: 988 KNGDGEVDSPR-RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPAEE 1164
E R R RS+SSPENGQVESPG I ++ GYDGADSP + S SRSPPAEE
Sbjct: 298 SPPPYEKRRERSRSRSKSSPENGQVESPGQIMEEEAGRGYDGADSPIRESSPSRSPPAEE 357
>gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 356
Score = 483 bits (1243), Expect = 3e-134
Identities = 264/360 (73%), Positives = 289/360 (80%), Gaps = 18/360 (5%)
Frame = +1
Query: 121 PVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGR 300
PVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+GR
Sbjct: 3 PVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGR 62
Query: 301 KGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRDLERHFEP 477
GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVINFDA NTRTRDLERHFEP
Sbjct: 63 TGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEP 119
Query: 478 YGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE 657
YGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVISVEYA+KDDD+RGNG+SPE
Sbjct: 120 YGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPE 179
Query: 658 RRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKRTRR 834
RRRDRSP+RRR SPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR R
Sbjct: 180 RRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKRA-R 237
Query: 835 SSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKKESL 987
SP+Y RD R R N + R R SRSP + +RE SP ++ES
Sbjct: 238 LSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRRESR 297
Query: 988 KNGDGEVDSPR-RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPAEE 1164
E R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRSPPAEE
Sbjct: 298 SPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRSPPAEE 356
>gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana]
Length = 356
Score = 482 bits (1240), Expect = 6e-134
Identities = 263/360 (73%), Positives = 289/360 (80%), Gaps = 18/360 (5%)
Frame = +1
Query: 121 PVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGR 300
PVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+GR
Sbjct: 3 PVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGR 62
Query: 301 KGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRDLERHFEP 477
GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVINFDA NTRTRDLERHFEP
Sbjct: 63 TGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEP 119
Query: 478 YGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE 657
YGKIVNVRIRRN+AF+QYE QEDATRAL+ATN+SKLMDKVISVEYA+KDDD+RGNG+SPE
Sbjct: 120 YGKIVNVRIRRNYAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPE 179
Query: 658 RRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKRTRR 834
RRRDRSP+RRR SPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR R
Sbjct: 180 RRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKRA-R 237
Query: 835 SSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKKESL 987
SP+Y RD R R N + R R SRSP + +RE SP ++ES
Sbjct: 238 LSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRRESR 297
Query: 988 KNGDGEVDSPR-RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPAEE 1164
E R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRSPPAEE
Sbjct: 298 SPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRSPPAEE 356
>gi|238481546|ref|NP_001154774.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 324
Score = 421 bits (1081), Expect = 2e-115
Identities = 233/327 (71%), Positives = 255/327 (77%), Gaps = 17/327 (5%)
Frame = +1
Query: 220 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-L 396
GFAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG +G GGSRRSSS L
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGL 59
Query: 397 RPSKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNN 576
RPSKTLFVINFDA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+
Sbjct: 60 RPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNS 119
Query: 577 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPV 756
SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRR SPSPY+RERGSPDYGRG SPV
Sbjct: 120 SKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV 179
Query: 757 AAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPR 915
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 180 -AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRG 237
Query: 916 YSRSP---DNKRERVSPDRSPFKKESLKNGDGEVDSPR-RERSRSSPENGQVESPGSIGR 1083
SRSP + +RE SP ++ES E R R RS+SSPENGQVESPG I
Sbjct: 238 ESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIME 297
Query: 1084 RDSDGGYDGADSPPMQKSRSRSPPAEE 1164
++ GYDGADSP + S SRSPPAEE
Sbjct: 298 VEAGRGYDGADSPIRESSPSRSPPAEE 324
>gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana]
Length = 323
Score = 418 bits (1074), Expect = 1e-114
Identities = 233/327 (71%), Positives = 257/327 (78%), Gaps = 18/327 (5%)
Frame = +1
Query: 220 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-L 396
GFAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG +G GGSRRSSS L
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGL 59
Query: 397 RPSKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNN 576
RPSKTLFVINFDA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+
Sbjct: 60 RPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNS 119
Query: 577 SKLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPV 756
SKLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRR SPSPY+RERGSPDYGRG SPV
Sbjct: 120 SKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV 179
Query: 757 AAYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPR 915
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 180 -AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRG 237
Query: 916 YSRSP---DNKRERVSPDRSPFKKESLKNGDGEVDSPR-RERSRSSPENGQVESPGSIGR 1083
SRSP + +RE SP ++ES E R R RS+SSPENGQVESPG I
Sbjct: 238 ESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIME 297
Query: 1084 RDSDGGYDGADSPPMQKSRSRSPPAEE 1164
++ GYDGADS P+++S SRSPPAEE
Sbjct: 298 VEAGRGYDGADS-PIRESPSRSPPAEE 323
>gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 329
Score = 416 bits (1068), Expect = 5e-114
Identities = 232/326 (71%), Positives = 256/326 (78%), Gaps = 18/326 (5%)
Frame = +1
Query: 223 FAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LR 399
FAFVYMEDERDAEDAIRALDR E+GR GRRLRVEWTK +RGG +G GGSRRSSS LR
Sbjct: 10 FAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLR 66
Query: 400 PSKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNS 579
PSKTLFVINFDA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+S
Sbjct: 67 PSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSS 126
Query: 580 KLMDKVISVEYAMKDDDARGNGHSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVA 759
KLMDKVISVEYA+KDDD+RGNG+SPERRRDRSP+RRR SPSPY+RERGSPDYGRG SPV
Sbjct: 127 KLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV- 185
Query: 760 AYKRERTSPDYGR-RRSPSPYKRTRRSSPEYGRDHRHR------GNESPRRRERAASPRY 918
A+KRERTSPDYGR RRSPSPYKR R SP+Y RD R R N + R R
Sbjct: 186 AHKRERTSPDYGRGRRSPSPYKRA-RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGE 244
Query: 919 SRSP---DNKRERVSPDRSPFKKESLKNGDGEVDSPR-RERSRSSPENGQVESPGSIGRR 1086
SRSP + +RE SP ++ES E R R RS+SSPENGQVESPG I
Sbjct: 245 SRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEV 304
Query: 1087 DSDGGYDGADSPPMQKSRSRSPPAEE 1164
++ GYDGADS P+++S SRSPPAEE
Sbjct: 305 EAGRGYDGADS-PIRESPSRSPPAEE 329
>gi|224120150|ref|XP_002318257.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 395 bits (1013), Expect = 1e-107
Identities = 209/326 (64%), Positives = 245/326 (75%), Gaps = 27/326 (8%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
+FCGNFEYDAR+ +LERLF++YGRVERVDMKAGFAF+YMEDERDAEDAIR LDR+EFGRK
Sbjct: 4 IFCGNFEYDARQTELERLFKRYGRVERVDMKAGFAFIYMEDERDAEDAIRGLDRVEFGRK 63
Query: 304 GRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFEPYG 483
GRRL VEWTK ERG + GG SR+S++ RPSKTLFVINFD +TRT+DLERHFEPYG
Sbjct: 64 GRRLHVEWTKQERGARQ---PGGSSRKSANTRPSKTLFVINFDPHHTRTKDLERHFEPYG 120
Query: 484 KIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPERR 663
+IV+VRIRRNFAFVQYE QEDAT+AL+ATN SKL+ +VISVEYA +DD R +GHSP+R
Sbjct: 121 RIVSVRIRRNFAFVQYEAQEDATKALDATNMSKLLYRVISVEYAARDDGERKDGHSPDRS 180
Query: 664 RDRSPER----RR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 831
RDRSP+R RR SPSPY+RERGS DYG G SP Y++ER SPD G RRSPSPY+R
Sbjct: 181 RDRSPDRRGHDRRRSPSPYRRERGSTDYGHGPSP---YRKERVSPDSGCRRSPSPYRRD- 236
Query: 832 RSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKE--SLKNGDGE 1005
R+SP+YGR SP RRERA S P R P++K+ S NG+G
Sbjct: 237 RASPDYGRG----STRSPSRRERAGSDHGH----------GPSRGPYRKDKASPVNGNGP 282
Query: 1006 VDSPRRERSRSSPENGQVESPGSIGR 1083
DSP + + SPENG+V S GR
Sbjct: 283 SDSPYQREEKLSPENGRVPSRSPYGR 308
>gi|224136870|ref|XP_002322436.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 389 bits (999), Expect = 5e-106
Identities = 215/342 (62%), Positives = 251/342 (73%), Gaps = 20/342 (5%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
+FCGNFEYDAR+ +LERLF++YGRVERVDMK+GFAF+YMEDERDAEDAIR LDR+EFGRK
Sbjct: 4 IFCGNFEYDARQTELERLFKRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRVEFGRK 63
Query: 304 GRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFEPYG 483
GRRLRVEWTK ERG R GG SRRS++ RPSKTLFVINFD +TRT+DLERHFEPYG
Sbjct: 64 GRRLRVEWTKQERGIRR---PGGTSRRSTNTRPSKTLFVINFDPHHTRTKDLERHFEPYG 120
Query: 484 KIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPERR 663
+IV+VRIRRNFAFVQYE QEDAT+AL+ATN SKL+D+VISVEYA++DDD R +G+SP+R
Sbjct: 121 RIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLLDRVISVEYAVRDDDERKDGYSPDRS 180
Query: 664 RDRSPER----RR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTR 831
RDRSP+R RR SPSPY+RERGSPDYGRG SP Y++ER SPDYGRRRSPSPY+R
Sbjct: 181 RDRSPDRRGHDRRRSPSPYRRERGSPDYGRGPSP---YRKERGSPDYGRRRSPSPYRRD- 236
Query: 832 RSSPEYGRDHRHRGNESPRRRERAA---SPRYSRSPDNKRERVSPDRSPFKKESLKNGDG 1002
R+SP+YGR + SP RRERA SP R P R + S + G
Sbjct: 237 RASPDYGRG----TSRSPYRRERAGKRISPENGRGPSRSPYRRERSNQGHGRGSSHSPYG 292
Query: 1003 -EVDSPRRERSRS-SPENGQVESPGSIGRRDSDGGYDGADSP 1122
E +P R S SP +SP + R D DSP
Sbjct: 293 RERPNPDNGRGSSRSPTERDGDSPENGQLRSPSSIPDERDSP 334
>gi|255636874|gb|ACU18770.1| unknown [Glycine max]
Length = 374
Score = 384 bits (985), Expect = 2e-104
Identities = 219/351 (62%), Positives = 258/351 (73%), Gaps = 29/351 (8%)
Frame = +1
Query: 109 GIMKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRI 288
G M+P+FCGNFEYDAR+ +LERLFR+YG+V+RVDMK+GFAF+YMEDERDAE AIRALDR+
Sbjct: 4 GKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRALDRV 63
Query: 289 EFGRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSL-RPSKTLFVINFDADNTRTRDLER 465
EFGRKGRRLRVEWTK ERG R + SRRSS++ RPSKTLFVINFD +TRTRDLER
Sbjct: 64 EFGRKGRRLRVEWTKHERGVRRPA----SSRRSSAIGRPSKTLFVINFDTYHTRTRDLER 119
Query: 466 HFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNG 645
HFEPYGKIV+VRIRRNFAFVQYE ++DA+RALEATN SKL+D+VISVE+A+KDDD R NG
Sbjct: 120 HFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNG 179
Query: 646 HSPERRRDRSPERR---R*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPS- 813
+SPER RDR +R R SPSPY++ERGSPDYGRG SP Y+RER SPDYGR RS S
Sbjct: 180 YSPERGRDRQRDRSRDGRRSPSPYRKERGSPDYGRGPSP---YQRERGSPDYGRDRSRSR 236
Query: 814 PYKRTRRSSPEYGRDHRHRGNESPRRRERAASPRY---SRSPDNKR-----ERVSPDRSP 969
R R+SP YG R + SP RRER S SRSP +K +SP +SP
Sbjct: 237 SPPRRERASPAYG-----RRSISPYRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSP 291
Query: 970 --FKKESLKNGDGEVDSPRRERSRSSPENGQVE-SPGSIGRRDSDGGYDGA 1113
++S +NG G SP R+ ++SPENG SP G GY G+
Sbjct: 292 EGRGRKSPQNGHGSSRSP-RDTGKTSPENGHGSGSPDEKGNPSPYNGYGGS 341
>gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 367 bits (941), Expect = 3e-099
Identities = 205/313 (65%), Positives = 237/313 (75%), Gaps = 31/313 (9%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
+FCGNF+YDAR+ DLERLFR+YG+V+RVDMK GFAF+YMEDERDAEDAIR LDR FGRK
Sbjct: 4 IFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRK 63
Query: 304 GRRLRVEWTKGERGGDRRSGGGGGSRRSS-SLRPSKTLFVINFDADNTRTRDLERHFEPY 480
GRRLRVEWTK ERG R S GSRRSS +LRP+KTLFVINFD NTRTRDLERHF+PY
Sbjct: 64 GRRLRVEWTKQERGIRRPS----GSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPY 119
Query: 481 GKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE- 657
GKI+N+RIRRNFAF+QYE QEDATRALEATN SKLMD+VISVEYA++DDD R NG+SP+
Sbjct: 120 GKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDG 179
Query: 658 RRRDRSPER---RR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRT 828
RRRD+S ER + S SPY+RERGSPDYGRG SP +AY+RER SPDYGR SPSP +R
Sbjct: 180 RRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP-SAYRRERASPDYGRDPSPSP-RRR 237
Query: 829 RRSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKESLKN----- 993
R+ P++GR + S RRER S D+ R P RSP++ E
Sbjct: 238 DRAMPDHGRSR----SPSHHRRERT-------SHDSAR---GPSRSPYRSERSDRAIPDY 283
Query: 994 GDGEVDSP-RRER 1029
G G SP RRE+
Sbjct: 284 GRGRSPSPGRREK 296
>gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis
vinifera]
Length = 479
Score = 367 bits (940), Expect = 4e-099
Identities = 205/313 (65%), Positives = 237/313 (75%), Gaps = 31/313 (9%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
+FCGNF+YDAR+ DLERLFR+YG+V+RVDMK GFAF+YMEDERDAEDAIR LDR FGRK
Sbjct: 4 IFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRK 63
Query: 304 GRRLRVEWTKGERGGDRRSGGGGGSRRSS-SLRPSKTLFVINFDADNTRTRDLERHFEPY 480
GRRLRVEWTK ERG R S GSRRSS +LRP+KTLFVINFD NTRTRDLERHF+PY
Sbjct: 64 GRRLRVEWTKQERGIRRPS----GSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPY 119
Query: 481 GKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE- 657
GKI+N+RIRRNFAF+QYE QEDATRALEATN SKLMD+VISVEYA++DDD R NG+SP+
Sbjct: 120 GKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDG 179
Query: 658 RRRDRSPER---RR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRT 828
RRRD+S ER + S SPY+RERGSPDYGRG SP +AY+RER SPDYGR SPSP +R
Sbjct: 180 RRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP-SAYRRERASPDYGRDPSPSP-RRR 237
Query: 829 RRSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKESLKN----- 993
R+ P++GR + S RRER S D+ R P RSP++ E
Sbjct: 238 DRAIPDHGRSR----SPSHHRRERT-------SHDSAR---GPSRSPYRSERSDRAIPDY 283
Query: 994 GDGEVDSP-RRER 1029
G G SP RRE+
Sbjct: 284 GRGRSPSPGRREK 296
>gi|225455461|ref|XP_002279907.1| PREDICTED: similar to splicing factor-like
protein [Vitis vinifera]
Length = 478
Score = 367 bits (940), Expect = 4e-099
Identities = 205/313 (65%), Positives = 237/313 (75%), Gaps = 31/313 (9%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
+FCGNF+YDAR+ DLERLFR+YG+V+RVDMK GFAF+YMEDERDAEDAIR LDR FGRK
Sbjct: 4 IFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRK 63
Query: 304 GRRLRVEWTKGERGGDRRSGGGGGSRRSS-SLRPSKTLFVINFDADNTRTRDLERHFEPY 480
GRRLRVEWTK ERG R S GSRRSS +LRP+KTLFVINFD NTRTRDLERHF+PY
Sbjct: 64 GRRLRVEWTKQERGIRRPS----GSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPY 119
Query: 481 GKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSPE- 657
GKI+N+RIRRNFAF+QYE QEDATRALEATN SKLMD+VISVEYA++DDD R NG+SP+
Sbjct: 120 GKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDG 179
Query: 658 RRRDRSPER---RR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRT 828
RRRD+S ER + S SPY+RERGSPDYGRG SP +AY+RER SPDYGR SPSP +R
Sbjct: 180 RRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSP-SAYRRERASPDYGRDPSPSP-RRR 237
Query: 829 RRSSPEYGRDHRHRGNESPRRRERAASPRYSRSPDNKRERVSPDRSPFKKESLKN----- 993
R+ P++GR + S RRER S D+ R P RSP++ E
Sbjct: 238 DRAIPDHGRSR----SPSHHRRERT-------SHDSAR---GPSRSPYRSERSDRAIPDY 283
Query: 994 GDGEVDSP-RRER 1029
G G SP RRE+
Sbjct: 284 GRGRSPSPGRREK 296
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,584,745,891,651
Number of Sequences: 15229318
Number of Extensions: 2584745891651
Number of Successful Extensions: 639272726
Number of sequences better than 0.0: 0
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