BLASTX 7.6.2
Query= UN21361 /QuerySize=1347
(1346 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40... 618 4e-176
sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41... 487 8e-137
sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31... 285 8e-076
sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-r... 75 7e-013
sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-r... 68 2e-010
sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila m... 65 1e-009
>sp|P92965|RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis
thaliana GN=RSP40 PE=1 SV=2
Length = 350
Score = 618 bits (1592), Expect = 4e-176
Identities = 311/354 (87%), Positives = 332/354 (93%), Gaps = 8/354 (2%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
MKPVFCGNFEYDAREGDLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFE 474
GRKGRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVINFDADNTRTRDLE+HFE
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFE 119
Query: 475 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHSP 654
PYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVISVEYA+KDDDARGNGHSP
Sbjct: 120 PYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSP 179
Query: 655 ERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRR 834
ERRRDRSPERRR SPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR
Sbjct: 180 ERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR 239
Query: 835 SSPEYGRDHRHRGNESPRRRERAASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVD 1011
SPEYGRD RGN+SPRRRER ASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+
Sbjct: 240 GSPEYGRD--RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVE 297
Query: 1012 SP--RRERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRS-RSPPAEE 1164
SP RRERSRSSPENGQVESPGSIGRRDSDGGYDGA+S PMQKSRS RSPPA+E
Sbjct: 298 SPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAES-PMQKSRSPRSPPADE 350
>sp|P92966|RSP41_ARATH Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis
thaliana GN=RSP41 PE=1 SV=2
Length = 356
Score = 487 bits (1253), Expect = 8e-137
Identities = 266/362 (73%), Positives = 291/362 (80%), Gaps = 18/362 (4%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
MKPVFCGNFEYDARE DLERLFRKYG+VERVDMKAGFAFVYMEDERDAEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVINFDADNTRTRDLERHF 471
GR GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVINFDA NTRTRDLERHF
Sbjct: 61 GRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 117
Query: 472 EPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDARGNGHS 651
EPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVISVEYA+KDDD+RGNG+S
Sbjct: 118 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 177
Query: 652 PERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGR-RRSPSPYKRT 828
PERRRDRSP+RRR SPSPY+RERGSPDYGRG SPV A+KRERTSPDYGR RRSPSPYKR
Sbjct: 178 PERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPV-AHKRERTSPDYGRGRRSPSPYKRA 236
Query: 829 RRSSPEYGRDHRHR------GNESPRRRERAASPRYSRSP---DNKRERVSPDRSPFKKE 981
R SP+Y RD R R N + R R SRSP + +RE SP ++E
Sbjct: 237 -RLSPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRRE 295
Query: 982 SLKNGDGEVDSPR-RERSRSSPENGQVESPGSIGRRDSDGGYDGADSPPMQKSRSRSPPA 1158
S E R R RS+SSPENGQVESPG I ++ GYDGADS P+++S SRSPPA
Sbjct: 296 SRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADS-PIRESPSRSPPA 354
Query: 1159 EE 1164
EE
Sbjct: 355 EE 356
>sp|P92964|RSP31_ARATH Arginine/serine-rich-splicing factor RSP31 OS=Arabidopsis
thaliana GN=RSP31 PE=1 SV=2
Length = 264
Score = 285 bits (727), Expect = 8e-076
Identities = 160/274 (58%), Positives = 191/274 (69%), Gaps = 20/274 (7%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
M+PVF GNFEY+ R+ DLERLF KYGRV+RVDMK+G+AFVY EDERDAEDAIR LD F
Sbjct: 1 MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVINFDADNTRTRDLERHFE 474
G + RRL VEW KGERG R G ++ S+L+P+KTLFVINFD T+ D+E+HFE
Sbjct: 61 GYEKRRLSVEWAKGERGRPR-----GDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFE 115
Query: 475 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVISVEYAMKDDDA---RGNG 645
PYGK+ NVRIRRNF+FVQ+E QEDAT+ALEAT SK++D+V+SVEYA+KDDD R G
Sbjct: 116 PYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGG 175
Query: 646 HSPERRRDRSPERRR*SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKR 825
SP RR SP RR PSP R SP GR SP Y R R SP+Y R + P+ Y+
Sbjct: 176 RSP--RRSLSPVYRR-RPSPDYGRRPSPGQGRRPSP--DYGRAR-SPEYDRYKGPAAYE- 228
Query: 826 TRRSSPEYGRDHRHRGNE-SP---RRRERAASPR 915
RR SP+YGR G + SP R R R+ PR
Sbjct: 229 -RRRSPDYGRRSSDYGRQRSPGYDRYRSRSPVPR 261
>sp|Q10021|RSP5_CAEEL Probable splicing factor, arginine/serine-rich 5
OS=Caenorhabditis elegans GN=rsp-5 PE=2 SV=3
Length = 208
Score = 75 bits (184), Expect = 7e-013
Identities = 41/95 (43%), Positives = 52/95 (54%)
Frame = +1
Query: 115 MKPVFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF 294
M ++ G Y+ARE D+ER + YG++ + MK GFAFV ED RDAEDA LD
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTM 60
Query: 295 GRKGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLR 399
RL VE +G+ G+ R G RRS S R
Sbjct: 61 EGSSMRLVVEMARGKPRGNDRHGSRSPRRRSRSPR 95
>sp|Q23121|RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1
OS=Caenorhabditis elegans GN=rsp-1 PE=2 SV=1
Length = 312
Score = 68 bits (164), Expect = 2e-010
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
++ G E D+E FR YG++ V +K GF FV +D+RDAEDA+ L+ E G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELG-- 62
Query: 304 GRRLRVEWTKGERGGDRRSGGGGGSR 381
G R+ ++++K GG R G GGG R
Sbjct: 63 GERVILDYSKPRGGGGDRGGFGGGGR 88
>sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila melanogaster
GN=B52 PE=1 SV=4
Length = 376
Score = 65 bits (156), Expect = 1e-009
Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Frame = +1
Query: 124 VFCGNFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRK 303
V+ G Y RE DLER F+ YGR + +K G+ FV ED RDA+DA+ L+ E
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKEL--L 63
Query: 304 GRRLRVEWTKG-----------ERGGDRRSGGGG 372
G R+ VE +G +R G RR GGGG
Sbjct: 64 GERVVVEPARGTARGSNRDRYDDRYGGRRGGGGG 97
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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