BLASTX 7.6.2
Query= UN21388 /QuerySize=1498
(1497 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06110.1 | Symbols: SKIP16 | SKIP16 (SKP1/ASK-... 731 3e-211
>TAIR9_protein||AT1G06110.1 | Symbols: SKIP16 | SKIP16 (SKP1/ASK-interacting
protein 16); protein binding | chr1:1853237-1854938 REVERSE
Length = 437
Score = 731 bits (1886), Expect = 3e-211
Identities = 355/437 (81%), Positives = 391/437 (89%), Gaps = 5/437 (1%)
Frame = +2
Query: 59 MGLEEAGDLVLHIILSKIGPENTARVACVSKRLKVSASEDSLWSIFSSHDLNISTPLGPH 238
MGLE+AGDLVLHI+LSKIGPENTARVACVSKRLKVSASE+SLWSIF S+DLNISTPL PH
Sbjct: 1 MGLEDAGDLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPH 60
Query: 239 GDPSPSFKAAYQSWRESFRMYPWHLVKRVGRCWDNLKRWLRLNFPEAEATLRKGATEEDL 418
GDP+PSFK AYQ WRESFRMYPW+LVKRV CWDNLK+WL LNFPEA+ATLRKG TE+DL
Sbjct: 61 GDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDL 120
Query: 419 EEFESALKVKLPLPTRLLYRFVDGQEPSS-----SSNGLIGGYSVYSHEVNVYLLPLKEV 583
+EFE++LKVKLPLPTRLLYRFVDGQE SS S GLIGGYS YSH+VNVYLLPLKEV
Sbjct: 121 QEFETSLKVKLPLPTRLLYRFVDGQELSSPNGLDGSLGLIGGYSAYSHDVNVYLLPLKEV 180
Query: 584 IRETNETMSDLFGISNGSNYIVVAASATASLKLFFLDCTDGQLYTGTSTRQMLPCVPESL 763
+RET E+ G S+ + IV+AAS ASLK+F LDCT GQL+TGTS RQ+LPCVP++L
Sbjct: 181 MRETKESFMRDLGFSSRLDLIVMAASVVASLKIFLLDCTTGQLFTGTSNRQLLPCVPDAL 240
Query: 764 VRSVHDVDGDQQQDAMLLWLEEHGRRLQTGVIKVREEEKIKSISLFPEVSPLCSVAVTNG 943
VRSVHD +GDQQQDAMLLWLEEHGRRLQTG I VR++ +KSISLFPE+ PLCSV+VTNG
Sbjct: 241 VRSVHDTNGDQQQDAMLLWLEEHGRRLQTGTINVRQQNNVKSISLFPEIPPLCSVSVTNG 300
Query: 944 VQVRASSVFIPEVSNLRGQPPAYWYAYSIRMSLVPEGCFLNGRHHSSCQLYWRHWIIRAD 1123
VQVRASSVFIPE+SNLR QPPAYWYAYSIRMSL+PEGC LNG HHSSCQLYWRHW+IRAD
Sbjct: 301 VQVRASSVFIPEISNLRDQPPAYWYAYSIRMSLMPEGCILNGTHHSSCQLYWRHWVIRAD 360
Query: 1124 DEVIDKVNGEAVIGKYPLLQAE*EEFVYESCSSFPTTSGSIEGSFTFVPGSLRDPKGSQF 1303
+EVID VNGEAVIGKYPLLQA EEFVYESCSSFPTT+GSI+GSFTFVPGSLRDPKGSQF
Sbjct: 361 NEVIDNVNGEAVIGKYPLLQAGEEEFVYESCSSFPTTAGSIDGSFTFVPGSLRDPKGSQF 420
Query: 1304 EVKVEEFPLKLPDYIF* 1354
EVKV EFPL+LPDYIF*
Sbjct: 421 EVKVVEFPLELPDYIF* 437
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,173,142,472
Number of Sequences: 33410
Number of Extensions: 11173142472
Number of Successful Extensions: 370179375
Number of sequences better than 0.0: 0
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