BLASTX 7.6.2
Query= UN21438 /QuerySize=1372
(1371 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q54ZR7|SRPR_DICDI Signal recognition particle receptor subuni... 376 2e-103
sp|Q9DBG7|SRPR_MOUSE Signal recognition particle receptor subuni... 371 1e-101
sp|Q57739|Y291_METJA Probable signal recognition particle protei... 217 2e-055
sp|Q3MHE8|SRPR_BOVIN Signal recognition particle receptor subuni... 208 1e-052
sp|P08240|SRPR_HUMAN Signal recognition particle receptor subuni... 208 1e-052
sp|Q9U5L1|SRPR_DROME Signal recognition particle receptor subuni... 208 1e-052
sp|P06625|SRPR_CANFA Signal recognition particle receptor subuni... 207 2e-052
sp|P27414|DOCK_SULAC Probable signal recognition particle protei... 161 2e-038
sp|P74214|SRP54_SYNY3 Signal recognition particle protein OS=Syn... 145 1e-033
sp|Q55311|SRP54_SYNE7 Signal sequence-binding protein OS=Synecho... 139 7e-032
sp|P49968|SR541_HORVU Signal recognition particle 54 kDa protein... 134 1e-030
sp|P49969|SR542_HORVU Signal recognition particle 54 kDa protein... 134 1e-030
sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein... 133 3e-030
sp|P49967|SR543_ARATH Signal recognition particle 54 kDa protein... 133 4e-030
sp|P37106|SR541_ARATH Signal recognition particle 54 kDa protein... 132 5e-030
sp|P10121|FTSY_ECOLI Cell division protein ftsY OS=Escherichia c... 132 7e-030
>sp|Q54ZR7|SRPR_DICDI Signal recognition particle receptor subunit alpha
OS=Dictyostelium discoideum GN=srpr PE=3 SV=1
Length = 615
Score = 376 bits (965), Expect = 2e-103
Identities = 198/345 (57%), Positives = 256/345 (74%), Gaps = 12/345 (3%)
Frame = +1
Query: 145 ESMMDKEEVFSSDGE--SEDDDDDEPRSDEKPEAKKKGWFSSVFQSITGKANLERTDLEP 318
E + +K + F+ D + S DDDD+E EAK F F +TG +++ DLEP
Sbjct: 278 EIVREKIQKFNIDMDVSSSDDDDEE-------EAKPVSGFMKYFNVLTGNRVIDKQDLEP 330
Query: 319 ALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPR 498
L K L KNVA ++A+K+ +S+ LEGKKLA+F ++S V+ MED + RILTP+
Sbjct: 331 ILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPK 390
Query: 499 RSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSG 678
R+IDI+R+V A K +RPY +VF GVNGVGKSTNLAKV YWL + M+AACDTFRSG
Sbjct: 391 RNIDILREVQAVK-GKRPYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRSG 449
Query: 679 AVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 858
A+EQL+THA RL + +FE+GY KD A VA++AI A G DVVL+DT GRMQ+NEPLM+
Sbjct: 450 AIEQLKTHADRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQNNEPLMK 509
Query: 859 ALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTT--RLIDGILLTKFD 1032
ALSKL+N N DLVLFVGEALVGND VDQL+KF++ LS L+N+ T R IDGI+LTKFD
Sbjct: 510 ALSKLVNQNNVDLVLFVGEALVGNDGVDQLTKFDKSLSLLANTTQTHIRTIDGIILTKFD 569
Query: 1033 TIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLL 1167
TIDDKVGAA+SMVY +G P++F+G GQ+YTDLK++N+K++VK+LL
Sbjct: 570 TIDDKVGAAISMVYSTGHPILFLGTGQNYTDLKRMNIKSVVKSLL 614
>sp|Q9DBG7|SRPR_MOUSE Signal recognition particle receptor subunit alpha OS=Mus
musculus GN=Srpr PE=1 SV=1
Length = 636
Score = 371 bits (950), Expect = 1e-101
Identities = 203/409 (49%), Positives = 274/409 (66%), Gaps = 31/409 (7%)
Frame = +1
Query: 10 PPKKATKKNRVWD--DAAPKQVKLDF----TDSVDESGNGDHVD-VAAADQGESMMDKEE 168
P +K K RVW+ A K+V LD+ T+ E+ + ++ + G + D
Sbjct: 236 PKEKGKKAPRVWELGGCANKEV-LDYSTPTTNGTPEAALSEDINLIRGTGPGGQLQDL-- 292
Query: 169 VFSSDGESEDDDDDEPRSDEKPEAKK--KGWFSSVFQSITGKANLERTDLEPALKALKER 342
+ DD+ + KP A K G + + + G +L R D+E L +++
Sbjct: 293 ------DCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDH 346
Query: 343 LMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRD 522
L+ KNVA +IA +LCESV LEGK + +F+ ++STV+ A++++L++IL P+R +D++RD
Sbjct: 347 LIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRD 406
Query: 523 VHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTH 702
+ A+ ++RPYVV F GVNGVGKSTNLAK+++WL ++ SV++AACDTFR+GAVEQLRTH
Sbjct: 407 IMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTH 466
Query: 703 ARRL-------------QIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDN 843
RRL + +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN
Sbjct: 467 TRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDN 526
Query: 844 EPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLT 1023
PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L+D S + T RLIDGI+LT
Sbjct: 527 APLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLT 586
Query: 1024 KFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLLK 1170
KFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN KA+V L+K
Sbjct: 587 KFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 635
>sp|Q57739|Y291_METJA Probable signal recognition particle protein MJ0291
OS=Methanocaldococcus jannaschii GN=MJ0291 PE=3 SV=1
Length = 409
Score = 217 bits (552), Expect = 2e-055
Identities = 132/373 (35%), Positives = 211/373 (56%), Gaps = 23/373 (6%)
Frame = +1
Query: 70 KLDFTDSVDESGNGDHVDVAAADQGESMMDKEEVFSSDGESEDDDDDEPRSDEKPEAKKK 249
K+ FT + + V ++ E + K E+ ++ + ++ E + K E ++K
Sbjct: 38 KISFTSLFKKEPKKEEV---KKEKAEEEIKKSEIVKTEPSEKVEEAKEEIKEIKEEKEEK 94
Query: 250 --------GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEAS 405
G ++ + + + + D+E L+ L+ L+ +VA E+ EKL E+++
Sbjct: 95 KITFFDRFGLTRAIKKVLKKEVVILEEDIEDVLEELEIALLEADVALEVVEKLIENIKNE 154
Query: 406 LEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGV 585
L G+K++ + A+++A+ IL+ + IDI + K + +P V+VFVG+NG
Sbjct: 155 LVGRKISPDDNVEEITINAVKNAIKNILS-QEKIDIEEIIKKNKAEGKPTVIVFVGINGT 213
Query: 586 GKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVA 765
GK+T +AK+AY L+Q SV++AA DTFR+GA+EQL HA+ + + + + D A V
Sbjct: 214 GKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIKHKPGADSAAVI 273
Query: 766 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQ 945
+AIQ A G DVVL DTAGR N LM + K++ + KPDLV+FVG+AL GNDAV Q
Sbjct: 274 YDAIQHAKARGIDVVLADTAGRQATNVNLMEEIKKVVRVTKPDLVIFVGDALTGNDAVYQ 333
Query: 946 LSKFNQKLSDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTD 1125
+FN+ ++ IDGI+LTK D D K GAALS+ Y G P++++G GQ Y D
Sbjct: 334 AEEFNRAVN----------IDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYQD 382
Query: 1126 LKKLNVKAIVKTL 1164
L + + +V+ L
Sbjct: 383 LIEFDADWMVRKL 395
>sp|Q3MHE8|SRPR_BOVIN Signal recognition particle receptor subunit alpha OS=Bos
taurus GN=SRPR PE=2 SV=1
Length = 639
Score = 208 bits (528), Expect = 1e-052
Identities = 108/169 (63%), Positives = 127/169 (75%)
Frame = +1
Query: 664 TFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDN 843
T R A+ H R + +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN
Sbjct: 470 TRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDN 529
Query: 844 EPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLT 1023
PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L+D S + T RLIDGI+LT
Sbjct: 530 APLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLT 589
Query: 1024 KFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLLK 1170
KFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN KA+V L+K
Sbjct: 590 KFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 638
Score = 183 bits (462), Expect = 4e-045
Identities = 101/244 (41%), Positives = 154/244 (63%), Gaps = 17/244 (6%)
Frame = +1
Query: 10 PPKKATKKNRVW--DDAAPKQVKLDF----TDSVDESGNGDHVD-VAAADQGESMMDKEE 168
P +K K RVW +A K+V LD+ T+ E+ + ++ + G + D +
Sbjct: 238 PKEKGKKAPRVWALGGSANKEV-LDYSTPTTNGAPEAAPPEDINLIRGTGPGRQLQDLD- 295
Query: 169 VFSSDGESEDDDDDEPRSDEKPEAKK--KGWFSSVFQSITGKANLERTDLEPALKALKER 342
S DD+ ++ KP A K G + + + G +L R D+E L +++
Sbjct: 296 ------CSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMRDH 349
Query: 343 LMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRD 522
L+ KNVA +IA +LCESV LEGK + +F+ ++STV+ A++++L++IL P+R +D++RD
Sbjct: 350 LIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRD 409
Query: 523 VHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTH 702
+ A+ +RPYVV F GVNGVGKSTNLAK+++WL ++ SV++AACDTFR+GAVEQLRTH
Sbjct: 410 IMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTH 469
Query: 703 ARRL 714
RRL
Sbjct: 470 TRRL 473
>sp|P08240|SRPR_HUMAN Signal recognition particle receptor subunit alpha OS=Homo
sapiens GN=SRPR PE=1 SV=2
Length = 638
Score = 208 bits (528), Expect = 1e-052
Identities = 108/169 (63%), Positives = 127/169 (75%)
Frame = +1
Query: 664 TFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDN 843
T R A+ H R + +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN
Sbjct: 469 TRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDN 528
Query: 844 EPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLT 1023
PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L+D S + T RLIDGI+LT
Sbjct: 529 APLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLT 588
Query: 1024 KFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLLK 1170
KFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN KA+V L+K
Sbjct: 589 KFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637
Score = 184 bits (466), Expect = 2e-045
Identities = 101/244 (41%), Positives = 155/244 (63%), Gaps = 17/244 (6%)
Frame = +1
Query: 10 PPKKATKKNRVWD--DAAPKQVKLDF----TDSVDESGNGDHVD-VAAADQGESMMDKEE 168
P +K K RVW+ A K+V LD+ T+ E+ + ++ + G + D +
Sbjct: 237 PKEKGKKAPRVWELGGCANKEV-LDYSTPTTNGTPEAALSEDINLIRGTGSGGQLQDLD- 294
Query: 169 VFSSDGESEDDDDDEPRSDEKPEAKK--KGWFSSVFQSITGKANLERTDLEPALKALKER 342
S DD+ ++ KP A K G + + + G +L R D+E L +++
Sbjct: 295 ------CSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDH 348
Query: 343 LMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRD 522
L+ KNVA +IA +LCESV LEGK + +F+ ++STV+ A++++L++IL P+R +D++RD
Sbjct: 349 LIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRD 408
Query: 523 VHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTH 702
+ A+ ++RPYVV F GVNGVGKSTNLAK+++WL ++ SV++AACDTFR+GAVEQLRTH
Sbjct: 409 IMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTH 468
Query: 703 ARRL 714
RRL
Sbjct: 469 TRRL 472
>sp|Q9U5L1|SRPR_DROME Signal recognition particle receptor subunit alpha homolog
OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2
Length = 614
Score = 208 bits (527), Expect = 1e-052
Identities = 105/164 (64%), Positives = 128/164 (78%)
Frame = +1
Query: 679 AVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 858
A+ H R + ++EKGY KD A +A EAI+ A DVVLVDTAGRMQDNEPLMR
Sbjct: 451 ALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMR 510
Query: 859 ALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLTKFDTI 1038
+LSKLI +N PDLVLFVGEALVGN+AVDQL KFNQ L+D S++ +IDGI+LTKFDTI
Sbjct: 511 SLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTI 570
Query: 1039 DDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLLK 1170
DDKVGAA+SM YI+G P++FVG GQ+Y DLK +NV A+V +L+K
Sbjct: 571 DDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 614
Score = 197 bits (500), Expect = 2e-049
Identities = 106/242 (43%), Positives = 155/242 (64%), Gaps = 12/242 (4%)
Frame = +1
Query: 13 PKKATKKNRVWD------DAAPKQVKLDFTDSVDESGNGDHVDVAAADQGESMMDKEEVF 174
P+KA KK RVWD DAA D D V +++ + ++ +V
Sbjct: 212 PEKAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQY----QNINSELVGTMQGVIRDLDVE 267
Query: 175 SSDGESEDDDDDEPRSDEKPEAK--KKGWFSSVFQSITGKANLERTDLEPALKALKERLM 348
S D +D E ++E+ ++K K+G S F+ I G + DL+PAL+ +++ L+
Sbjct: 268 SEDEADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLI 327
Query: 349 TKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRDVH 528
+KNVA EIA KLC+SV ASL+GK++ +F I+S V+ A+ ++L+RIL+P+R IDI+RD
Sbjct: 328 SKNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDAL 387
Query: 529 AAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHAR 708
+K RPY ++F GVNGVGKSTNLAK+ +WL ++ +V++AACDTFR+GAVEQLRTH R
Sbjct: 388 ESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTR 447
Query: 709 RL 714
L
Sbjct: 448 HL 449
>sp|P06625|SRPR_CANFA Signal recognition particle receptor subunit alpha
OS=Canis familiaris GN=SRPR PE=2 SV=2
Length = 638
Score = 207 bits (525), Expect = 2e-052
Identities = 108/169 (63%), Positives = 127/169 (75%)
Frame = +1
Query: 664 TFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDN 843
T R A+ HA + +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN
Sbjct: 469 TRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDN 528
Query: 844 EPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLT 1023
PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L+D S + T RLIDGI+LT
Sbjct: 529 APLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLT 588
Query: 1024 KFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLLK 1170
KFDTIDDKVGAA+SM YI+ P++FVG GQ+Y DL+ LN KA+V L+K
Sbjct: 589 KFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637
Score = 178 bits (451), Expect = 8e-044
Identities = 98/244 (40%), Positives = 153/244 (62%), Gaps = 17/244 (6%)
Frame = +1
Query: 10 PPKKATKKNRVW--DDAAPKQVKLDF----TDSVDESGNGDHVD-VAAADQGESMMDKEE 168
P +K K RVW A K+V LD+ T+ ++ + ++ + G + D +
Sbjct: 237 PKEKGKKAPRVWALGGCANKEV-LDYSAPTTNGAPDAAPPEDINLIRGTGPGGQLQDLD- 294
Query: 169 VFSSDGESEDDDDDEPRSDEKPEAKK--KGWFSSVFQSITGKANLERTDLEPALKALKER 342
S DD++ ++ KP A K G + + + G +L R D+E L +++
Sbjct: 295 ------CSSSDDEETAQNASKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDH 348
Query: 343 LMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRD 522
L+ KNVA +IA +LCESV LEGK + +F+ ++STV+ A++++L++IL P+R +D++RD
Sbjct: 349 LIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRD 408
Query: 523 VHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTH 702
+ A+ +RPYVV F GVNGVGKSTNLAK+++WL ++ SV++AACDTFR+GAVE +RTH
Sbjct: 409 IMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTH 468
Query: 703 ARRL 714
RRL
Sbjct: 469 TRRL 472
>sp|P27414|DOCK_SULAC Probable signal recognition particle protein OS=Sulfolobus
acidocaldarius GN=dpa PE=3 SV=1
Length = 369
Score = 161 bits (405), Expect = 2e-038
Identities = 93/308 (30%), Positives = 168/308 (54%), Gaps = 8/308 (2%)
Frame = +1
Query: 61 KQVKLDFTDSVDESGNGDHVDVAAADQGES-----MMDKEEVFSSDGESEDDDDDEPRSD 225
K+ +F D + N + DQ ES + ++ V E++ + E S
Sbjct: 8 KKAFSNFLDKISGEENKKEPETRQTDQLESKKEETIQQQQNVQQPQAENKIEQKQEKISV 67
Query: 226 EKPEAKKKGWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEAS 405
+ + K+ S F + K ++ DL ++ L+ +L+ +V+ E+ EK+ E ++ +
Sbjct: 68 QTGQENKQENKRSFFDFLKYK-TIKEDDLNDVIEELRFQLLDSDVSYEVTEKILEDLKNN 126
Query: 406 LEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGV 585
L GKK++ + V ++ ++ ILT + D++ + ++ ++P+V++F GVNGV
Sbjct: 127 LIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSS--GKKPFVIIFFGVNGV 184
Query: 586 GKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVA 765
GK+T +AKV L+++ +S ++AA DTFR+ A EQL HA +L++ + Y DPA VA
Sbjct: 185 GKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVA 244
Query: 766 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQ 945
+AI A DVVL+DTAGRM + L+ L +++ + KPD + + ++L G+DA++Q
Sbjct: 245 FDAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKRVLRIAKPDFRILILDSLAGSDALEQ 304
Query: 946 LSKFNQKL 969
F +
Sbjct: 305 ARHFENNV 312
>sp|P74214|SRP54_SYNY3 Signal recognition particle protein OS=Synechocystis sp.
(strain PCC 6803) GN=ffh PE=3 SV=1
Length = 482
Score = 145 bits (364), Expect = 1e-033
Identities = 82/288 (28%), Positives = 158/288 (54%), Gaps = 18/288 (6%)
Frame = +1
Query: 268 FQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLASFTRISS 447
++ + G+ + ++++ AL+ ++ L+ +V ++ + + VE G + S
Sbjct: 13 WKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKALGADVISGVNPGQ 72
Query: 448 TVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQ 627
+ D L+ ++ +V A+ ++ P V++ G+ G GK+T AK+A +L+
Sbjct: 73 QFIKIVYDELVNLMGE-------SNVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLR 125
Query: 628 QHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDV 807
+ K S +M A D +R A++QL+T +++ +P+F+ G + +P +A++ +++A G D
Sbjct: 126 KQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDT 185
Query: 808 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNS 987
VL+DTAGR+Q + +M L+++ + KPD L V +A+ G +A + F++++
Sbjct: 186 VLIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG----- 240
Query: 988 GTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLK 1131
I G +LTK D D + GAALS+ ISG P+ FVG G+ L+
Sbjct: 241 -----ITGAILTKLDG-DTRGGAALSVRQISGQPIKFVGVGEKVEALQ 282
>sp|Q55311|SRP54_SYNE7 Signal sequence-binding protein OS=Synechococcus
elongatus (strain PCC 7942) GN=ffh PE=3 SV=1
Length = 485
Score = 139 bits (348), Expect = 7e-032
Identities = 80/297 (26%), Positives = 157/297 (52%), Gaps = 18/297 (6%)
Frame = +1
Query: 277 ITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQ 456
+ G+ + ++++ ALK ++ L+ +V + ++ V+ G ++ S R
Sbjct: 16 LRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFI 75
Query: 457 GAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHK 636
+ D L++++ V A+ + P V++ G+ G GK+T AK+A L++
Sbjct: 76 KVVYDELVQVMGETH-------VPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEG 128
Query: 637 VSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLV 816
S ++ A D +R A++QL T +++ +P+FE G + +P +A++ +++A + G D V+V
Sbjct: 129 RSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIV 188
Query: 817 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTT 996
DTAGR+Q + +M L+++ P VL V ++++G +A F++++
Sbjct: 189 DTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG-------- 240
Query: 997 RLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTLL 1167
I G +LTK D D + GAALS+ +SG P+ FVG G+ L+ + + + +L
Sbjct: 241 --ITGAILTKLDG-DSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRIL 294
>sp|P49968|SR541_HORVU Signal recognition particle 54 kDa protein 1 OS=Hordeum
vulgare GN=SRP54-1 PE=2 SV=1
Length = 497
Score = 134 bits (337), Expect = 1e-030
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G S ++ ++ L L + L+ +V ++ + ++ + + LA+
Sbjct: 8 GSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
T +Q A+ L +L P + ++ +P VV+FVG+ G GK+T K
Sbjct: 68 GTNKRRIIQQAVFTELCNMLDPGKPA-------FTTKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E ++
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ SD++++DT+GR + L + ++ KPDLV+FV + +G A DQ F Q
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
S + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 S----------VGAVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>sp|P49969|SR542_HORVU Signal recognition particle 54 kDa protein 2 OS=Hordeum
vulgare GN=SRP54-2 PE=2 SV=1
Length = 497
Score = 134 bits (337), Expect = 1e-030
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G S ++ ++ L L + L+ +V ++ + ++ + + LA+
Sbjct: 8 GSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
T +Q A+ L +L P + ++ +P VV+FVG+ G GK+T K
Sbjct: 68 GTNKRRIIQQAVFTELCNMLDPGKPA-------FTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E ++
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ SD++++DT+GR + L + ++ KPDLV+FV + +G A DQ F Q
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
S + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 S----------VGAVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2 OS=Solanum
lycopersicum PE=2 SV=1
Length = 499
Score = 133 bits (334), Expect = 3e-030
Identities = 82/306 (26%), Positives = 150/306 (49%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G S Q ++ ++ L L + L+ +V ++ + +++ + LA+
Sbjct: 8 GSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIVNLDDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
+Q A+ + L +IL P + ++ +P +V+FVG+ G GK+T K
Sbjct: 68 GHNKRRIIQQAVFNELCKILDPGKP-------SFTPKKGKPSIVMFVGLQGSGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A + ++
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ D+++VDT+GR + L + ++ KPDLV+FV ++ +G A DQ F Q +
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
+ + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 A----------VGAVIVTKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>sp|P49967|SR543_ARATH Signal recognition particle 54 kDa protein 3
OS=Arabidopsis thaliana GN=SRP-54C PE=2 SV=2
Length = 495
Score = 133 bits (333), Expect = 4e-030
Identities = 81/306 (26%), Positives = 151/306 (49%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G + Q ++ ++ L L + L+ +V+ + +++ +++ + + LA+
Sbjct: 8 GRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
++ A+ L ++L P + A ++ + VV+FVG+ G GK+T K
Sbjct: 68 GHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E +
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ D+++VDT+GR + L + ++ KPDLV+FV ++ +G A DQ F Q +
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
+ + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 A----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>sp|P37106|SR541_ARATH Signal recognition particle 54 kDa protein 1
OS=Arabidopsis thaliana GN=SRP-54A PE=2 SV=1
Length = 479
Score = 132 bits (332), Expect = 5e-030
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G + Q + ++ L L + L+ +V+ + EK+ +++ + LA+
Sbjct: 8 GRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
++ A+ L R+L P + A ++ +P VV+FVG+ G GK+T K
Sbjct: 68 GHNKRLIIEQAIFKELCRMLDPGKPA-------FAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E +
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ D+++VDT+GR + L + ++ +PDLV+FV ++ +G A +Q F + +
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
S + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 S----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>sp|P10121|FTSY_ECOLI Cell division protein ftsY OS=Escherichia coli (strain
K12) GN=ftsY PE=1 SV=1
Length = 497
Score = 132 bits (331), Expect = 7e-030
Identities = 98/342 (28%), Positives = 165/342 (48%), Gaps = 40/342 (11%)
Frame = +1
Query: 190 SEDDDDDEPRSDEKPEAKKKGWFSSVFQS-ITGKANL----------ERTDLEPALKALK 336
+E++ E + E+ + K+G+F+ + +S + K NL ++ D + + L+
Sbjct: 174 AEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKID-DDLFEELE 232
Query: 337 ERLMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIM 516
E+L+ +V E K+ ++ K+L + ++ M + L ++ P
Sbjct: 233 EQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLN----- 287
Query: 517 RDVHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLR 696
E + P+V++ VGVNGVGK+T + K+A +Q SVM+AA DTFR+ AVEQL+
Sbjct: 288 ------VEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQ 341
Query: 697 THARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 876
+R IP+ + D A V +AIQ A DV++ DTAGR+Q+ LM L K++
Sbjct: 342 VWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIV 401
Query: 877 NLNK------PDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLTKFDTI 1038
+ K P V+ +A G +AV Q F++ + + GI LTK D
Sbjct: 402 RVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVG----------LTGITLTKLDG- 450
Query: 1039 DDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIVKTL 1164
K G S+ G P+ ++G G+ DL+ ++ L
Sbjct: 451 TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEAL 492
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,891,173,716
Number of Sequences: 518415
Number of Extensions: 89891173716
Number of Successful Extensions: 595657870
Number of sequences better than 0.0: 0
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