BLASTX 7.6.2
Query= UN21438 /QuerySize=1372
(1371 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G30600.1 | Symbols: | signal recognition part... 708 2e-204
TAIR9_protein||AT1G48900.1 | Symbols: | signal recognition part... 133 4e-031
TAIR9_protein||AT1G48900.2 | Symbols: | signal recognition part... 133 4e-031
TAIR9_protein||AT1G15310.1 | Symbols: ATHSRP54A, SRP54-1 | ATHSR... 132 5e-031
TAIR9_protein||AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54C... 130 3e-030
TAIR9_protein||AT2G45770.1 | Symbols: CPFTSY, FRD4 | CPFTSY; 7S ... 120 3e-027
TAIR9_protein||AT5G49500.1 | Symbols: | signal recognition part... 91 1e-018
>TAIR9_protein||AT4G30600.1 | Symbols: | signal recognition particle receptor
alpha subunit family protein | chr4:14938142-14940600 REVERSE
Length = 635
Score = 708 bits (1827), Expect = 2e-204
Identities = 366/391 (93%), Positives = 376/391 (96%), Gaps = 3/391 (0%)
Frame = +1
Query: 4 AEPPKKATKKNRVWDDAAPKQVKLDFTDSVDESGNGDHVDVAAADQGESMMDKEEVFSSD 183
AEP KKATKKNRVWDDAAPKQ KLDFTDS+DE+GN DHVD+ AADQGESMMDKEEVFSSD
Sbjct: 247 AEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMMDKEEVFSSD 306
Query: 184 GESEDDDDDEPRSDEKP-EAKKKGWFSSVFQSITGKANLERTDLEPALKALKERLMTKNV 360
ESE DDDEP SDEKP +AKKKGWFSSVFQSITGKANLERTDL PALKALKERLMTKNV
Sbjct: 307 SESE--DDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKERLMTKNV 364
Query: 361 AEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKE 540
AEEIAEKLCESVEASLEGKKL+SFTRISSTVQ AMEDAL+RILTPRRSIDI+RDVHAAKE
Sbjct: 365 AEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRDVHAAKE 424
Query: 541 QRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQI 720
QR+PYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQI
Sbjct: 425 QRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQI 484
Query: 721 PIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLV 900
PIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN+PDLV
Sbjct: 485 PIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNQPDLV 544
Query: 901 LFVGEALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYIS 1080
LFVGEALVGNDAVDQLSKFNQKLSDLS SG RLIDGILLTKFDTIDDKVGAALSMVYIS
Sbjct: 545 LFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALSMVYIS 604
Query: 1081 GAPVMFVGCGQSYTDLKKLNVKAIVKTLLK* 1173
G+PVMFVGCGQSYTDLKKLNVKAIVKTLLK*
Sbjct: 605 GSPVMFVGCGQSYTDLKKLNVKAIVKTLLK* 635
>TAIR9_protein||AT1G48900.1 | Symbols: | signal recognition particle 54 kDa
protein 3 / SRP54 (SRP-54C) | chr1:18084972-18087743 REVERSE
Length = 496
Score = 133 bits (333), Expect = 4e-031
Identities = 81/306 (26%), Positives = 151/306 (49%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G + Q ++ ++ L L + L+ +V+ + +++ +++ + + LA+
Sbjct: 8 GRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
++ A+ L ++L P + A ++ + VV+FVG+ G GK+T K
Sbjct: 68 GHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E +
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ D+++VDT+GR + L + ++ KPDLV+FV ++ +G A DQ F Q +
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
+ + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 A----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>TAIR9_protein||AT1G48900.2 | Symbols: | signal recognition particle 54 kDa
protein 3 / SRP54 (SRP-54C) | chr1:18085031-18087743 REVERSE
Length = 432
Score = 133 bits (333), Expect = 4e-031
Identities = 81/306 (26%), Positives = 151/306 (49%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G + Q ++ ++ L L + L+ +V+ + +++ +++ + + LA+
Sbjct: 8 GRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
++ A+ L ++L P + A ++ + VV+FVG+ G GK+T K
Sbjct: 68 GHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E +
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ D+++VDT+GR + L + ++ KPDLV+FV ++ +G A DQ F Q +
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
+ + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 A----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>TAIR9_protein||AT1G15310.1 | Symbols: ATHSRP54A, SRP54-1 | ATHSRP54A
(ARABIDOPSIS THALIANA SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT); 7S
RNA binding / GTP binding / mRNA binding / nucleoside-triphosphatase/
nucleotide binding | chr1:5269173-5271947 REVERSE
Length = 480
Score = 132 bits (332), Expect = 5e-031
Identities = 83/306 (27%), Positives = 150/306 (49%), Gaps = 18/306 (5%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G + Q + ++ L L + L+ +V+ + EK+ +++ + LA+
Sbjct: 8 GRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
++ A+ L R+L P + A ++ +P VV+FVG+ G GK+T K
Sbjct: 68 GHNKRLIIEQAIFKELCRMLDPGKPA-------FAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP +A E +
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+ D+++VDT+GR + L + ++ +PDLV+FV ++ +G A +Q F + +
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKA 1149
S + +++TK D K G ALS V + +PV+F+G G+ + + +VK
Sbjct: 241 S----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1150 IVKTLL 1167
V LL
Sbjct: 290 FVSRLL 295
>TAIR9_protein||AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54CP | CPSRP54
(CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT); 7S RNA
binding / GTP binding / mRNA binding / signal sequence binding |
chr5:1060265-1063257 REVERSE
Length = 565
Score = 130 bits (325), Expect = 3e-030
Identities = 82/294 (27%), Positives = 153/294 (52%), Gaps = 18/294 (6%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G + + + G+ L + ++ ++ ++ L+ +V+ + + +SV G +
Sbjct: 83 GGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIR 142
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAK 609
+ + + D L++++ S ++ AK P V++ G+ GVGK+T AK
Sbjct: 143 GVKPDQQLVKIVHDELVKLMGGEVS-----ELQFAKS--GPTVILLAGLQGVGKTTVCAK 195
Query: 610 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 789
+A +L++ S M+ A D +R A++QL ++ +P++ G + PA +AK+ ++EA
Sbjct: 196 LACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAK 255
Query: 790 RNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKL 969
+N DVV++DTAGR+Q ++ +M L + P VL V +A+ G +A ++ FN ++
Sbjct: 256 KNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEI 315
Query: 970 SDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLK 1131
I G +LTK D D + GAALS+ +SG P+ VG G+ DL+
Sbjct: 316 G----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358
>TAIR9_protein||AT2G45770.1 | Symbols: CPFTSY, FRD4 | CPFTSY; 7S RNA binding /
GTP binding / nucleoside-triphosphatase/ nucleotide binding |
chr2:18851248-18853402 FORWARD
Length = 367
Score = 120 bits (299), Expect = 3e-027
Identities = 90/296 (30%), Positives = 150/296 (50%), Gaps = 31/296 (10%)
Frame = +1
Query: 292 NLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLASFTRISSTVQGAMED 471
NL TD L L+E L+ + +I ++ E + + KL S S ++ A+++
Sbjct: 89 NLAETD--RVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKS----GSEIKDALKE 142
Query: 472 ALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMM 651
+++ +L + S R+P V++ VGVNG GK+T+L K+A+ L+ V+M
Sbjct: 143 SVLEMLAKKNS-----KTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLM 197
Query: 652 AACDTFRSGAVEQLRTHARRLQIPI-FEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAG 828
AA DTFR+ A +QL A R I +G + A V +A++ G DVVL DT+G
Sbjct: 198 AAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSG 257
Query: 829 RMQDNEPLM-------RALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSNS 987
R+ N LM +A+ K+++ P+ +L V + G + + Q +FN+ +
Sbjct: 258 RLHTNYSLMEELIACKKAVGKIVS-GAPNEILLVLDGNTGLNMLPQAREFNEVVG----- 311
Query: 988 GTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKAIV 1155
I G++LTK D + G +S+V G PV F+G G++ DL+ + +A V
Sbjct: 312 -----ITGLILTKLDG-SARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFV 361
>TAIR9_protein||AT5G49500.1 | Symbols: | signal recognition particle 54 kDa
protein 2 / SRP54 (SRP-54B) | chr5:20077556-20080206 REVERSE
Length = 498
Score = 91 bits (225), Expect = 1e-018
Identities = 57/243 (23%), Positives = 117/243 (48%), Gaps = 9/243 (3%)
Frame = +1
Query: 250 GWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLAS 429
G S Q + ++ L L + L+ +V+ + +++ +++ + + LA+
Sbjct: 8 GRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLEDLAA 67
Query: 430 FTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAKEQRRPYVVVFVGVNG--VGKSTNL 603
++ A+ L ++L P +S A ++ +P VV+FVG+ G + K +
Sbjct: 68 GHNKRRIIEQAIFSELCKMLDPGKSA-------FAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 604 AKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQE 783
+ +++ + DTFR+GA +QL+ +A + +IP + DP +A E +
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180
Query: 784 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQ 963
+ D+++VDT+GR + L + ++ KPDLV+FV ++ +G A +Q F Q
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240
Query: 964 KLS 972
++
Sbjct: 241 TVA 243
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,173,142,472
Number of Sequences: 33410
Number of Extensions: 11173142472
Number of Successful Extensions: 370179375
Number of sequences better than 0.0: 0
|
